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SummaryGeometryRelated PDB entries

48V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N05C03sing1.35Å1.43Å
C03O04doub1.21Å1.23Å
C03C02sing1.51Å1.47Å
N01C02sing1.47Å1.52Å
C02C06sing1.53Å1.54Å
C06S07sing1.81Å1.84Å
S07C08sing1.81Å1.88Å
O10C09doub1.21Å1.45Å
C08C09sing1.51Å1.58Å
C09O1sing1.34Å1.39Å
N01H1sing1.01Å1.00Å
N01H2sing1.01Å1.00Å
C02H4sing1.09Å1.10Å
N05H5sing0.97Å1.00Å
N05H6sing0.97Å1.00Å
C06H7sing1.09Å1.10Å
C06H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C08H10sing1.09Å1.10Å
O1H11sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N05C03O04120.7°120.0°
N05C03C02117.3°120.0°
C03N05H5120.0°120.0°
C03N05H6120.0°120.1°
O04C03C02121.9°120.0°
C03C02N01106.8°109.5°
C03C02C06109.6°109.5°
C03C02H4111.4°109.5°
N01C02C06107.8°109.5°
C02N01H1109.5°111.0°
C02N01H2109.5°111.0°
N01C02H4110.7°109.5°
C02C06S07105.2°109.5°
C06C02H4110.3°109.4°
C02C06H7110.5°109.5°
C02C06H8110.5°109.5°
C06S07C08107.7°103.0°
S07C06H7110.5°109.5°
S07C06H8110.6°109.5°
S07C08C09114.6°109.5°
S07C08H9108.2°109.5°
S07C08H10108.2°109.5°
O10C09C08126.2°120.0°
O10C09O1122.9°120.0°
C08C09O1110.9°120.1°
C09C08H9108.2°109.4°
C09C08H10108.2°109.5°
C09O1H11109.5°117.1°
H1N01H2109.4°111.0°
H5N05H6120.0°119.9°
H7C06H8109.5°109.5°
H9C08H10109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N05C03O04C02179.9°180.0°
N05C03C02N01146.0°160.0°
N05C03C02C0697.4°80.0°
N05C03C02H425.0°40.0°
C03N05H5H6180.0°180.0°
O04C03C02N0134.1°20.0°
O04C03C02C0682.4°100.0°
O04C03C02H4155.1°140.0°
O04C03N05H50.0°0.0°
O04C03N05H6180.0°180.0°
C03C02N01C06117.8°120.0°
C03C02N01H4121.5°120.0°
C03C02C06H4123.0°120.0°
C03C02C06S0778.0°180.0°
C03C02N01H1180.0°64.0°
C03C02N01H260.0°60.0°
C02C03N05H5179.9°180.0°
C02C03N05H60.1°0.0°
C03C02C06H741.3°60.0°
C03C02C06H8162.7°60.0°
N01C02C06H4121.0°120.0°
N01C02C06S0738.0°60.0°
C02N01H1H2120.0°124.0°
N01C02C06H7157.3°60.0°
N01C02C06H881.4°180.0°
C02C06S07H7119.3°120.0°
C02C06S07H8119.3°120.0°
C02C06S07C08159.4°180.0°
C06C02N01H162.2°176.0°
C06C02N01H2177.8°60.1°
C02C06H7H8122.0°120.0°
C06S07C08C0978.4°180.0°
S07C06C02H4159.0°60.0°
S07C06H7H8122.0°120.0°
C06S07C08H9160.9°60.0°
C06S07C08H1042.4°60.0°
S07C08C09O1011.5°0.0°
S07C08C09H9120.8°120.0°
S07C08C09H10120.7°120.1°
S07C08C09O1168.5°180.0°
C08S07C06H781.2°60.0°
C08S07C06H840.1°60.0°
S07C08H9H10117.6°120.1°
O10C09C08O1180.0°180.0°
O10C09C08H9109.2°120.0°
O10C09C08H10132.3°120.0°
O10C09O1H110.0°0.0°
C09C08H9H10117.7°120.0°
C08C09O1H11180.0°180.0°
O1C09C08H970.8°60.0°
O1C09C08H1047.7°59.9°
H1N01C02H458.5°56.1°
H2N01C02H461.5°180.0°
H4C02C06H781.7°180.0°
H4C02C06H839.6°60.0°

223532

PDB entries from 2024-08-07

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