41Q
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
ND2 | CG | doub | 1.29Å | 1.30Å | |
CG | CB | sing | 1.51Å | 1.52Å | |
CG | OD1 | sing | 1.35Å | 1.42Å | |
CB | CA | sing | 1.53Å | 1.51Å | |
O | C | doub | 1.21Å | 1.26Å | |
CA | N | sing | 1.47Å | 1.43Å | |
CA | C | sing | 1.51Å | 1.51Å | |
C | OXT | sing | 1.34Å | 1.32Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
ND2 | HD21 | sing | 0.97Å | 1.00Å | |
OD1 | HD11 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
ND2 | CG | CB | 118.5° | 119.9° |
ND2 | CG | OD1 | 118.9° | 120.0° |
CG | ND2 | HD21 | 112.0° | 120.0° |
CB | CG | OD1 | 122.6° | 120.0° |
CG | CB | CA | 113.4° | 109.5° |
CG | CB | HB2 | 108.5° | 109.5° |
CG | CB | HB1 | 108.5° | 109.5° |
CG | OD1 | HD11 | 109.5° | 114.0° |
CB | CA | N | 106.1° | 109.4° |
CB | CA | C | 111.9° | 109.5° |
CB | CA | HA | 108.3° | 109.5° |
CA | CB | HB2 | 108.5° | 109.5° |
CA | CB | HB1 | 108.5° | 109.4° |
O | C | CA | 121.5° | 120.0° |
O | C | OXT | 122.6° | 120.0° |
N | CA | C | 112.9° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
N | CA | HA | 109.3° | 109.4° |
CA | C | OXT | 115.9° | 120.0° |
C | CA | HA | 108.2° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.5° | 111.0° |
HB2 | CB | HB1 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
ND2 | CG | CB | OD1 | 179.7° | 180.0° |
ND2 | CG | CB | CA | 162.1° | 0.0° |
ND2 | CG | CB | HB2 | 77.3° | 120.0° |
ND2 | CG | CB | HB1 | 41.5° | 120.0° |
ND2 | CG | OD1 | HD11 | 180.0° | 0.0° |
CG | CB | CA | HB2 | 120.6° | 120.1° |
CG | CB | CA | HB1 | 120.6° | 120.0° |
CG | CB | CA | N | 162.4° | 65.0° |
CG | CB | CA | C | 74.0° | 175.0° |
CG | CB | CA | HA | 45.2° | 54.9° |
CG | CB | HB2 | HB1 | 118.2° | 120.0° |
CB | CG | ND2 | HD21 | 179.7° | 180.0° |
CB | CG | OD1 | HD11 | 0.3° | 180.0° |
OD1 | CG | CB | CA | 17.6° | 180.0° |
OD1 | CG | CB | HB2 | 103.0° | 60.0° |
OD1 | CG | CB | HB1 | 138.2° | 60.0° |
OD1 | CG | ND2 | HD21 | 0.0° | 0.0° |
CB | CA | C | O | 15.6° | 100.1° |
CB | CA | N | C | 123.0° | 120.0° |
CB | CA | N | HA | 116.5° | 120.0° |
CB | CA | C | HA | 119.2° | 120.1° |
CB | CA | C | OXT | 162.3° | 80.1° |
CB | CA | N | H | 180.0° | 176.0° |
CB | CA | N | H2 | 60.0° | 60.0° |
CA | CB | HB2 | HB1 | 118.2° | 119.9° |
O | C | CA | N | 104.1° | 19.9° |
O | C | CA | OXT | 178.0° | 179.9° |
O | C | CA | HA | 134.8° | 139.9° |
O | C | OXT | HXT | 0.0° | 0.1° |
N | CA | C | HA | 121.1° | 120.0° |
N | CA | C | OXT | 78.0° | 160.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | HB2 | 77.0° | 55.1° |
N | CA | CB | HB1 | 41.8° | 175.0° |
C | CA | N | H | 57.0° | 64.0° |
C | CA | N | H2 | 63.0° | 59.9° |
C | CA | CB | HB2 | 46.6° | 64.9° |
C | CA | CB | HB1 | 165.4° | 55.0° |
CA | C | OXT | HXT | 177.9° | 179.9° |
OXT | C | CA | HA | 43.1° | 40.0° |
H | N | CA | HA | 63.5° | 56.0° |
H2 | N | CA | HA | 176.5° | 180.0° |
HA | CA | CB | HB2 | 165.8° | 175.0° |
HA | CA | CB | HB1 | 75.4° | 65.0° |