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3DI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C7C8sing1.40Å1.37ÅAromatic
C7N2doub1.31Å1.34ÅAromatic
C8C6doub1.37Å1.41ÅAromatic
N2N1sing1.40Å1.36ÅAromatic
C6N1sing1.36Å1.34ÅAromatic
C6C4sing1.48Å1.48Å
C5C4doub1.39Å1.39ÅAromatic
C5Csing1.39Å1.40ÅAromatic
C4C3sing1.40Å1.39ÅAromatic
NCsing1.40Å1.38Å
CC1doub1.39Å1.40ÅAromatic
C3C2doub1.38Å1.38ÅAromatic
C1C2sing1.38Å1.38ÅAromatic
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C5H4sing1.08Å1.08Å
NH5sing0.97Å1.00Å
NH6sing0.97Å1.00Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
N1H9sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C7N2107.5°108.6°
C7C8C6105.2°107.8°
C8C7H7126.2°125.7°
C7C8H8127.4°126.1°
C7N2N1111.8°108.5°
N2C7H7126.3°125.7°
C8C6N1110.2°107.3°
C8C6C4128.9°126.3°
C6C8H8127.4°126.1°
N2N1C6105.3°107.7°
N2N1H9127.3°126.1°
N1C6C4120.8°126.4°
C6N1H9127.4°126.1°
C6C4C5120.1°120.1°
C6C4C3120.6°120.1°
C4C5C120.8°119.8°
C5C4C3119.3°119.8°
C4C5H4119.6°120.1°
C5CN120.3°120.0°
C5CC1118.9°120.0°
CC5H4119.6°120.1°
C4C3C2120.4°120.0°
C4C3H3119.8°120.0°
NCC1120.7°120.0°
CNH5109.5°120.1°
CNH6109.5°120.0°
CC1C2120.4°120.1°
CC1H1119.8°119.9°
C3C2C1120.2°120.3°
C3C2H2119.9°119.9°
C2C3H3119.8°120.0°
C2C1H1119.8°119.9°
C1C2H2119.9°119.8°
H5NH6109.5°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C7N2H7180.0°179.7°
C7C8C6H8180.0°180.0°
C8C7N2N10.0°0.4°
C7C8C6N10.3°0.0°
C7C8C6C4178.0°179.8°
N2C7C8C60.2°0.3°
C7N2N1C60.1°0.4°
N2C7C8H8179.8°179.7°
C7N2N1H9179.9°179.5°
C8C6N1N20.3°0.2°
C8C6N1C4178.5°179.8°
C8C6C4C50.1°179.7°
C8C6C4C3178.6°0.2°
C6C8C7H7179.8°180.0°
C8C6N1H9179.7°179.7°
N2N1C6H9180.0°179.9°
N2N1C6C4178.2°180.0°
N1N2C7H7180.0°179.9°
N1C6C4C5178.3°0.1°
N1C6C4C30.4°180.0°
N1C6C8H8179.7°179.9°
C6C4C5C3178.7°180.0°
C6C4C5C178.2°179.8°
C6C4C3C2178.6°180.0°
C6C4C3H31.4°0.0°
C6C4C5H41.8°0.1°
C4C6C8H81.9°0.2°
C4C6N1H91.8°0.1°
C4C5CH4180.0°179.8°
C4C5CN179.9°180.0°
C4C5CC10.4°0.5°
C5C4C3C20.1°0.0°
C5C4C3H3179.9°180.0°
CC5C4C30.5°0.2°
C5CNC1179.6°179.5°
C5CC1C20.2°0.5°
C5CC1H1179.8°179.8°
C5CNH5180.0°0.0°
C5CNH660.0°180.0°
C4C3C2H3180.0°180.0°
C4C3C2C10.5°0.0°
C4C3C2H2179.5°179.9°
C3C4C5H4179.5°180.0°
NCC1C2179.3°180.0°
NCC1H10.7°0.2°
NCC5H40.1°0.2°
CNH5H6120.0°179.9°
CC1C2C30.6°0.3°
CC1C2H1180.0°179.7°
CC1C2H2179.3°179.8°
C1CC5H4179.6°179.7°
C1CNH50.4°179.6°
C1CNH6120.5°0.5°
C3C2C1H2180.0°179.9°
C3C2C1H1179.4°180.0°
C1C2C3H3179.5°180.0°
H1C1C2H20.7°0.1°
H2C2C3H30.5°0.1°
H7C7C8H80.2°0.0°

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PDB entries from 2024-09-11

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