Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | doub | 1.39Å | 1.39Å | Aromatic |
C1 | C6 | sing | 1.39Å | 1.39Å | Aromatic |
C1 | O11 | sing | 1.36Å | 1.38Å | |
C2 | C3 | sing | 1.38Å | 1.39Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.08Å | |
C3 | C4 | doub | 1.38Å | 1.39Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C4 | C5 | sing | 1.38Å | 1.39Å | Aromatic |
C4 | CL4 | sing | 1.74Å | 1.73Å | |
C5 | C6 | doub | 1.38Å | 1.39Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
O11 | C12 | sing | 1.36Å | 1.39Å | |
C12 | C13 | doub | 1.39Å | 1.38Å | Aromatic |
C12 | C17 | sing | 1.39Å | 1.40Å | Aromatic |
C13 | C14 | sing | 1.38Å | 1.38Å | Aromatic |
C13 | H13 | sing | 1.08Å | 1.08Å | |
C14 | C15 | doub | 1.38Å | 1.39Å | Aromatic |
C14 | H14 | sing | 1.08Å | 1.08Å | |
C15 | C16 | sing | 1.38Å | 1.38Å | Aromatic |
C15 | S22 | sing | 1.76Å | 1.75Å | |
C16 | C17 | doub | 1.38Å | 1.39Å | Aromatic |
C16 | H16 | sing | 1.08Å | 1.08Å | |
C17 | H17 | sing | 1.08Å | 1.08Å | |
S22 | O23 | doub | 1.42Å | 1.43Å | |
S22 | O24 | doub | 1.42Å | 1.43Å | |
S22 | C25 | sing | 1.81Å | 1.83Å | |
C25 | C26 | sing | 1.53Å | 1.55Å | |
C25 | C30 | sing | 1.53Å | 1.54Å | |
C25 | C39 | sing | 1.53Å | 1.58Å | |
C26 | C27 | sing | 1.53Å | 1.54Å | |
C26 | H261 | sing | 1.09Å | 1.08Å | |
C26 | H262 | sing | 1.09Å | 1.08Å | |
C27 | O28 | sing | 1.43Å | 1.41Å | |
C27 | H271 | sing | 1.09Å | 1.08Å | |
C27 | H272 | sing | 1.09Å | 1.08Å | |
O28 | C29 | sing | 1.43Å | 1.41Å | |
C29 | C30 | sing | 1.53Å | 1.53Å | |
C29 | H291 | sing | 1.09Å | 1.08Å | |
C29 | H292 | sing | 1.09Å | 1.08Å | |
C30 | H301 | sing | 1.09Å | 1.08Å | |
C30 | H302 | sing | 1.09Å | 1.08Å | |
C39 | C40 | sing | 1.51Å | 1.53Å | |
C39 | H391 | sing | 1.09Å | 1.08Å | |
C39 | H392 | sing | 1.09Å | 1.08Å | |
C40 | N43 | sing | 1.35Å | 1.33Å | |
C40 | O44 | doub | 1.21Å | 1.24Å | |
N43 | O45 | sing | 1.42Å | 1.39Å | |
N43 | HN | sing | 0.97Å | 1.01Å | |
O45 | HO | sing | 0.97Å | 0.96Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | C6 | 120.5° | 119.9° |
C2 | C1 | O11 | 115.3° | 120.1° |
C1 | C2 | C3 | 120.8° | 120.0° |
C1 | C2 | H2 | 119.1° | 120.0° |
C6 | C1 | O11 | 124.2° | 120.0° |
C1 | C6 | C5 | 119.0° | 119.9° |
C1 | C6 | H6 | 122.6° | 120.0° |
C1 | O11 | C12 | 121.8° | 106.8° |
C3 | C2 | H2 | 120.0° | 120.0° |
C2 | C3 | C4 | 118.2° | 120.0° |
C2 | C3 | H3 | 119.7° | 120.0° |
C4 | C3 | H3 | 122.1° | 120.0° |
C3 | C4 | C5 | 121.6° | 120.1° |
C3 | C4 | CL4 | 119.0° | 119.9° |
C5 | C4 | CL4 | 119.4° | 119.9° |
C4 | C5 | C6 | 119.9° | 120.0° |
C4 | C5 | H5 | 120.6° | 120.0° |
C6 | C5 | H5 | 119.6° | 119.9° |
C5 | C6 | H6 | 118.3° | 120.1° |
O11 | C12 | C13 | 115.0° | 120.1° |
O11 | C12 | C17 | 124.8° | 120.1° |
C13 | C12 | C17 | 120.1° | 119.8° |
C12 | C13 | C14 | 119.7° | 120.0° |
C12 | C13 | H13 | 120.6° | 120.0° |
C12 | C17 | C16 | 120.0° | 120.0° |
C12 | C17 | H17 | 123.3° | 120.0° |
C14 | C13 | H13 | 119.7° | 120.0° |
C13 | C14 | C15 | 119.8° | 120.1° |
C13 | C14 | H14 | 118.6° | 120.0° |
C15 | C14 | H14 | 121.6° | 119.9° |
C14 | C15 | C16 | 121.1° | 120.1° |
C14 | C15 | S22 | 120.8° | 119.9° |
C16 | C15 | S22 | 118.1° | 119.9° |
C15 | C16 | C17 | 119.2° | 120.0° |
C15 | C16 | H16 | 121.1° | 119.9° |
C15 | S22 | O23 | 105.9° | 102.8° |
C15 | S22 | O24 | 101.7° | 102.8° |
C15 | S22 | C25 | 117.1° | 103.2° |
C17 | C16 | H16 | 119.6° | 120.1° |
C16 | C17 | H17 | 116.7° | 120.0° |
O23 | S22 | O24 | 117.0° | 122.1° |
O23 | S22 | C25 | 106.3° | 111.6° |
O24 | S22 | C25 | 109.3° | 111.6° |
S22 | C25 | C26 | 104.3° | 109.6° |
S22 | C25 | C30 | 107.8° | 109.8° |
S22 | C25 | C39 | 116.3° | 109.6° |
C26 | C25 | C30 | 108.3° | 108.6° |
C26 | C25 | C39 | 107.2° | 109.6° |
C25 | C26 | C27 | 112.1° | 109.0° |
C25 | C26 | H261 | 111.5° | 109.6° |
C25 | C26 | H262 | 110.1° | 109.5° |
C30 | C25 | C39 | 112.5° | 109.6° |
C25 | C30 | C29 | 112.1° | 109.0° |
C25 | C30 | H301 | 109.3° | 109.6° |
C25 | C30 | H302 | 110.7° | 109.5° |
C25 | C39 | C40 | 120.6° | 109.5° |
C25 | C39 | H391 | 108.9° | 109.5° |
C25 | C39 | H392 | 111.6° | 109.4° |
C27 | C26 | H261 | 111.2° | 109.6° |
C27 | C26 | H262 | 107.2° | 109.6° |
C26 | C27 | O28 | 108.7° | 109.8° |
C26 | C27 | H271 | 110.1° | 109.4° |
C26 | C27 | H272 | 113.7° | 109.4° |
H261 | C26 | H262 | 104.5° | 109.6° |
O28 | C27 | H271 | 108.4° | 109.5° |
O28 | C27 | H272 | 110.6° | 109.4° |
C27 | O28 | C29 | 118.1° | 107.6° |
H271 | C27 | H272 | 105.2° | 109.4° |
O28 | C29 | C30 | 110.9° | 109.8° |
O28 | C29 | H291 | 109.9° | 109.4° |
O28 | C29 | H292 | 107.6° | 109.5° |
C30 | C29 | H291 | 113.1° | 109.4° |
C30 | C29 | H292 | 109.8° | 109.4° |
C29 | C30 | H301 | 108.2° | 109.6° |
C29 | C30 | H302 | 111.0° | 109.5° |
H291 | C29 | H292 | 105.3° | 109.3° |
H301 | C30 | H302 | 105.3° | 109.6° |
C40 | C39 | H391 | 107.0° | 109.5° |
C40 | C39 | H392 | 103.8° | 109.5° |
C39 | C40 | N43 | 113.5° | 120.0° |
C39 | C40 | O44 | 125.3° | 120.0° |
H391 | C39 | H392 | 103.6° | 109.5° |
N43 | C40 | O44 | 121.2° | 120.1° |
C40 | N43 | O45 | 116.0° | 120.0° |
C40 | N43 | HN | 121.4° | 120.0° |
O45 | N43 | HN | 122.5° | 120.0° |
N43 | O45 | HO | 113.4° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | C6 | O11 | 177.3° | 179.7° |
C1 | C2 | C3 | H2 | 178.7° | 179.9° |
C1 | C2 | C3 | C4 | 0.8° | 0.1° |
C1 | C2 | C3 | H3 | 178.3° | 179.9° |
C2 | C1 | C6 | C5 | 0.7° | 0.6° |
C2 | C1 | C6 | H6 | 179.0° | 179.9° |
C2 | C1 | O11 | C12 | 140.4° | 5.7° |
C6 | C1 | C2 | C3 | 1.4° | 0.2° |
C6 | C1 | C2 | H2 | 179.9° | 179.6° |
C1 | C6 | C5 | C4 | 0.4° | 0.6° |
C1 | C6 | C5 | H6 | 178.3° | 179.3° |
C1 | C6 | C5 | H5 | 180.0° | 179.7° |
C6 | C1 | O11 | C12 | 42.1° | 174.5° |
O11 | C1 | C2 | C3 | 176.1° | 180.0° |
O11 | C1 | C2 | H2 | 2.6° | 0.1° |
O11 | C1 | C6 | C5 | 176.6° | 179.7° |
O11 | C1 | C6 | H6 | 1.7° | 0.4° |
C1 | O11 | C12 | C13 | 162.1° | 94.8° |
C1 | O11 | C12 | C17 | 20.1° | 85.3° |
C2 | C3 | C4 | H3 | 179.1° | 180.0° |
C2 | C3 | C4 | C5 | 0.4° | 0.0° |
C2 | C3 | C4 | CL4 | 178.9° | 180.0° |
H2 | C2 | C3 | C4 | 179.6° | 180.0° |
H2 | C2 | C3 | H3 | 0.4° | 0.0° |
C3 | C4 | C5 | CL4 | 179.3° | 179.9° |
C3 | C4 | C5 | C6 | 1.0° | 0.3° |
C3 | C4 | C5 | H5 | 179.4° | 180.0° |
H3 | C3 | C4 | C5 | 179.5° | 179.9° |
H3 | C3 | C4 | CL4 | 0.2° | 0.0° |
C4 | C5 | C6 | H5 | 179.6° | 179.7° |
C4 | C5 | C6 | H6 | 177.9° | 179.9° |
CL4 | C4 | C5 | C6 | 178.3° | 179.6° |
CL4 | C4 | C5 | H5 | 1.3° | 0.1° |
H5 | C5 | C6 | H6 | 1.7° | 0.4° |
O11 | C12 | C13 | C17 | 177.9° | 179.9° |
O11 | C12 | C13 | C14 | 175.7° | 180.0° |
O11 | C12 | C13 | H13 | 2.9° | 0.1° |
O11 | C12 | C17 | C16 | 177.2° | 179.8° |
O11 | C12 | C17 | H17 | 0.5° | 0.0° |
C12 | C13 | C14 | H13 | 178.6° | 180.0° |
C12 | C13 | C14 | C15 | 0.7° | 0.0° |
C12 | C13 | C14 | H14 | 177.2° | 180.0° |
C13 | C12 | C17 | C16 | 0.5° | 0.2° |
C13 | C12 | C17 | H17 | 178.2° | 180.0° |
C17 | C12 | C13 | C14 | 2.2° | 0.0° |
C17 | C12 | C13 | H13 | 179.2° | 180.0° |
C12 | C17 | C16 | C15 | 2.7° | 0.4° |
C12 | C17 | C16 | H17 | 177.9° | 179.8° |
C12 | C17 | C16 | H16 | 180.0° | 180.0° |
C13 | C14 | C15 | H14 | 177.9° | 180.0° |
C13 | C14 | C15 | C16 | 2.5° | 0.2° |
C13 | C14 | C15 | S22 | 175.4° | 180.0° |
H13 | C13 | C14 | C15 | 179.3° | 180.0° |
H13 | C13 | C14 | H14 | 1.4° | 0.0° |
C14 | C15 | C16 | S22 | 177.9° | 179.8° |
C14 | C15 | C16 | C17 | 4.2° | 0.4° |
C14 | C15 | C16 | H16 | 178.5° | 180.0° |
C14 | C15 | S22 | O23 | 24.8° | 26.2° |
C14 | C15 | S22 | O24 | 147.6° | 153.8° |
C14 | C15 | S22 | C25 | 93.4° | 90.0° |
H14 | C14 | C15 | C16 | 179.6° | 179.8° |
H14 | C14 | C15 | S22 | 2.5° | 0.0° |
C15 | C16 | C17 | H16 | 177.4° | 179.5° |
C15 | C16 | C17 | H17 | 175.2° | 179.8° |
C16 | C15 | S22 | O23 | 153.1° | 153.6° |
C16 | C15 | S22 | O24 | 30.3° | 25.9° |
C16 | C15 | S22 | C25 | 88.6° | 90.2° |
S22 | C15 | C16 | C17 | 173.8° | 179.8° |
S22 | C15 | C16 | H16 | 3.6° | 0.3° |
C15 | S22 | O23 | O24 | 112.5° | 114.2° |
C15 | S22 | O23 | C25 | 125.2° | 110.0° |
C15 | S22 | O24 | C25 | 124.4° | 109.9° |
C15 | S22 | C25 | C26 | 167.7° | 175.2° |
C15 | S22 | C25 | C30 | 52.8° | 65.6° |
C15 | S22 | C25 | C39 | 74.5° | 54.8° |
H16 | C16 | C17 | H17 | 2.2° | 0.2° |
O23 | S22 | O24 | C25 | 120.8° | 135.8° |
O23 | S22 | C25 | C26 | 74.3° | 65.4° |
O23 | S22 | C25 | C30 | 170.8° | 175.4° |
O23 | S22 | C25 | C39 | 43.5° | 54.9° |
O24 | S22 | C25 | C26 | 52.9° | 75.1° |
O24 | S22 | C25 | C30 | 62.1° | 44.1° |
O24 | S22 | C25 | C39 | 170.6° | 164.5° |
S22 | C25 | C26 | C30 | 114.6° | 119.9° |
S22 | C25 | C26 | C39 | 123.8° | 120.4° |
S22 | C25 | C30 | C39 | 129.5° | 120.5° |
S22 | C25 | C26 | C27 | 167.8° | 173.6° |
S22 | C25 | C26 | H261 | 66.8° | 53.8° |
S22 | C25 | C26 | H262 | 48.6° | 66.5° |
S22 | C25 | C30 | C29 | 163.3° | 173.5° |
S22 | C25 | C30 | H301 | 43.4° | 66.6° |
S22 | C25 | C30 | H302 | 72.2° | 53.7° |
S22 | C25 | C39 | C40 | 54.2° | 62.6° |
S22 | C25 | C39 | H391 | 69.9° | 177.3° |
S22 | C25 | C39 | H392 | 176.3° | 57.3° |
C26 | C25 | C30 | C39 | 118.3° | 119.7° |
C25 | C26 | C27 | H261 | 125.5° | 119.9° |
C25 | C26 | C27 | H262 | 120.9° | 119.9° |
C25 | C26 | H261 | H262 | 118.8° | 120.2° |
C25 | C26 | C27 | O28 | 54.8° | 61.3° |
C25 | C26 | C27 | H271 | 173.4° | 178.6° |
C25 | C26 | C27 | H272 | 68.8° | 58.8° |
C26 | C25 | C30 | C29 | 51.0° | 53.7° |
C26 | C25 | C30 | H301 | 68.9° | 173.6° |
C26 | C25 | C30 | H302 | 175.6° | 66.1° |
C26 | C25 | C39 | C40 | 170.3° | 57.7° |
C26 | C25 | C39 | H391 | 46.2° | 62.3° |
C26 | C25 | C39 | H392 | 67.6° | 177.7° |
C30 | C25 | C26 | C27 | 53.3° | 53.7° |
C30 | C25 | C26 | H261 | 178.6° | 66.2° |
C30 | C25 | C26 | H262 | 65.9° | 173.6° |
C25 | C30 | C29 | O28 | 51.4° | 61.3° |
C25 | C30 | C29 | H301 | 120.5° | 119.9° |
C25 | C30 | C29 | H302 | 124.4° | 119.8° |
C25 | C30 | C29 | H291 | 72.6° | 178.6° |
C25 | C30 | C29 | H292 | 170.2° | 58.9° |
C25 | C30 | H301 | H302 | 119.0° | 120.2° |
C30 | C25 | C39 | C40 | 70.7° | 176.8° |
C30 | C25 | C39 | H391 | 165.1° | 56.8° |
C30 | C25 | C39 | H392 | 51.3° | 63.2° |
C39 | C25 | C26 | C27 | 68.3° | 66.0° |
C39 | C25 | C26 | H261 | 57.0° | 174.1° |
C39 | C25 | C26 | H262 | 172.4° | 53.9° |
C39 | C25 | C30 | C29 | 67.2° | 66.0° |
C39 | C25 | C30 | H301 | 172.9° | 53.9° |
C39 | C25 | C30 | H302 | 57.3° | 174.2° |
C25 | C39 | C40 | H391 | 125.0° | 120.1° |
C25 | C39 | C40 | H392 | 125.8° | 119.9° |
C25 | C39 | H391 | H392 | 118.9° | 119.9° |
C25 | C39 | C40 | N43 | 108.8° | 173.6° |
C25 | C39 | C40 | O44 | 73.8° | 6.4° |
C27 | C26 | H261 | H262 | 115.3° | 120.2° |
C26 | C27 | O28 | H271 | 119.7° | 120.1° |
C26 | C27 | O28 | H272 | 125.4° | 120.1° |
C26 | C27 | H271 | H272 | 122.9° | 119.8° |
C26 | C27 | O28 | C29 | 57.5° | 67.6° |
H261 | C26 | C27 | O28 | 179.7° | 58.6° |
H261 | C26 | C27 | H271 | 61.1° | 61.5° |
H261 | C26 | C27 | H272 | 56.7° | 178.7° |
H262 | C26 | C27 | O28 | 66.1° | 178.8° |
H262 | C26 | C27 | H271 | 52.5° | 58.7° |
H262 | C26 | C27 | H272 | 170.3° | 61.1° |
O28 | C27 | H271 | H272 | 118.3° | 119.9° |
C27 | O28 | C29 | C30 | 56.5° | 67.6° |
C27 | O28 | C29 | H291 | 69.3° | 172.3° |
C27 | O28 | C29 | H292 | 176.6° | 52.5° |
H271 | C27 | O28 | C29 | 177.2° | 172.3° |
H272 | C27 | O28 | C29 | 67.9° | 52.5° |
O28 | C29 | C30 | H291 | 124.0° | 120.1° |
O28 | C29 | C30 | H292 | 118.8° | 120.2° |
O28 | C29 | H291 | H292 | 115.6° | 119.8° |
O28 | C29 | C30 | H301 | 69.1° | 178.8° |
O28 | C29 | C30 | H302 | 175.8° | 58.6° |
C30 | C29 | H291 | H292 | 119.8° | 119.8° |
C29 | C30 | H301 | H302 | 118.8° | 120.2° |
H291 | C29 | C30 | H301 | 166.9° | 58.7° |
H291 | C29 | C30 | H302 | 51.8° | 61.5° |
H292 | C29 | C30 | H301 | 49.7° | 61.0° |
H292 | C29 | C30 | H302 | 65.4° | 178.8° |
C40 | C39 | H391 | H392 | 109.3° | 120.0° |
C39 | C40 | N43 | O44 | 177.5° | 180.0° |
C39 | C40 | N43 | O45 | 163.3° | 179.9° |
C39 | C40 | N43 | HN | 15.5° | 0.0° |
H391 | C39 | C40 | N43 | 16.2° | 66.3° |
H391 | C39 | C40 | O44 | 161.2° | 113.6° |
H392 | C39 | C40 | N43 | 125.4° | 53.7° |
H392 | C39 | C40 | O44 | 52.0° | 126.4° |
C40 | N43 | O45 | HN | 178.8° | 179.9° |
C40 | N43 | O45 | HO | 172.4° | 180.0° |
O44 | C40 | N43 | O45 | 14.2° | 0.0° |
O44 | C40 | N43 | HN | 167.0° | 179.9° |
HN | N43 | O45 | HO | 8.8° | 0.1° |