24M
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.45Å | |
N | H | sing | 1.01Å | 1.00Å | |
CA | C5 | sing | 1.53Å | 1.55Å | |
CA | C36 | sing | 1.53Å | 1.55Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C5 | O7 | sing | 1.43Å | 1.43Å | |
C5 | C9 | sing | 1.53Å | 1.51Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
O7 | HO7 | sing | 0.97Å | 0.95Å | |
C9 | C11 | sing | 1.54Å | 1.56Å | |
C9 | C19 | sing | 1.54Å | 1.55Å | |
C9 | H9 | sing | 1.09Å | 1.10Å | |
C11 | C13 | sing | 1.54Å | 1.52Å | |
C11 | C | sing | 1.51Å | 1.51Å | |
C11 | H11 | sing | 1.09Å | 1.10Å | |
C13 | C16 | sing | 1.55Å | 1.54Å | |
C13 | H131 | sing | 1.09Å | 1.10Å | |
C13 | H132 | sing | 1.09Å | 1.10Å | |
C16 | C19 | sing | 1.55Å | 1.56Å | |
C16 | H161 | sing | 1.09Å | 1.10Å | |
C16 | H162 | sing | 1.09Å | 1.10Å | |
C19 | H191 | sing | 1.09Å | 1.10Å | |
C19 | H192 | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.22Å | |
C36 | C39 | sing | 1.53Å | 1.54Å | |
C36 | H361 | sing | 1.09Å | 1.10Å | |
C36 | H362 | sing | 1.09Å | 1.10Å | |
C39 | C41 | sing | 1.53Å | 1.55Å | |
C39 | C45 | sing | 1.53Å | 1.55Å | |
C39 | H39 | sing | 1.09Å | 1.10Å | |
C41 | H411 | sing | 1.09Å | 1.10Å | |
C41 | H412 | sing | 1.09Å | 1.10Å | |
C41 | H413 | sing | 1.09Å | 1.10Å | |
C45 | H451 | sing | 1.09Å | 1.10Å | |
C45 | H452 | sing | 1.09Å | 1.10Å | |
C45 | H453 | sing | 1.09Å | 1.10Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
C | OXT | sing | 1.34Å | 34.02Å | |
OXT | HXT | sing | 0.97Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
N | CA | C5 | 113.0° | 109.5° |
N | CA | C36 | 109.5° | 109.5° |
N | CA | HA | 107.7° | 109.5° |
CA | N | H2 | 109.5° | 111.0° |
H | N | H2 | 109.4° | 111.0° |
C5 | CA | C36 | 111.3° | 109.5° |
C5 | CA | HA | 105.7° | 109.4° |
CA | C5 | O7 | 112.0° | 109.4° |
CA | C5 | C9 | 112.6° | 109.5° |
CA | C5 | H5 | 105.2° | 109.5° |
C36 | CA | HA | 109.5° | 109.5° |
CA | C36 | C39 | 108.4° | 109.4° |
CA | C36 | H361 | 109.8° | 109.5° |
CA | C36 | H362 | 109.8° | 109.5° |
O7 | C5 | C9 | 108.5° | 109.5° |
O7 | C5 | H5 | 109.6° | 109.5° |
C5 | O7 | HO7 | 109.5° | 114.0° |
C9 | C5 | H5 | 108.9° | 109.5° |
C5 | C9 | C11 | 104.5° | 110.0° |
C5 | C9 | C19 | 108.8° | 110.0° |
C5 | C9 | H9 | 111.9° | 110.0° |
C11 | C9 | C19 | 105.8° | 106.6° |
C11 | C9 | H9 | 114.7° | 110.0° |
C9 | C11 | C13 | 106.8° | 106.6° |
C9 | C11 | C | 111.6° | 110.0° |
C9 | C11 | H11 | 110.9° | 110.0° |
C19 | C9 | H9 | 110.7° | 110.1° |
C9 | C19 | C16 | 107.2° | 104.2° |
C9 | C19 | H191 | 110.3° | 110.5° |
C9 | C19 | H192 | 110.2° | 110.5° |
C13 | C11 | C | 112.3° | 110.0° |
C13 | C11 | H11 | 110.2° | 110.0° |
C11 | C13 | C16 | 105.6° | 104.2° |
C11 | C13 | H131 | 110.8° | 110.5° |
C11 | C13 | H132 | 110.8° | 110.5° |
C | C11 | H11 | 105.2° | 110.0° |
C11 | C | O | 120.0° | 120.0° |
C11 | C | OXT | 17.8° | 120.0° |
C16 | C13 | H131 | 110.8° | 110.5° |
C16 | C13 | H132 | 110.8° | 110.4° |
C13 | C16 | C19 | 106.9° | 102.8° |
C13 | C16 | H161 | 110.3° | 110.7° |
C13 | C16 | H162 | 110.3° | 110.8° |
H131 | C13 | H132 | 108.1° | 110.6° |
C19 | C16 | H161 | 110.3° | 110.8° |
C19 | C16 | H162 | 110.3° | 110.8° |
C16 | C19 | H191 | 110.2° | 110.5° |
C16 | C19 | H192 | 110.3° | 110.5° |
H161 | C16 | H162 | 108.6° | 110.8° |
H191 | C19 | H192 | 108.7° | 110.5° |
O | C | OXT | 122.8° | 120.0° |
C39 | C36 | H361 | 109.8° | 109.5° |
C39 | C36 | H362 | 109.8° | 109.5° |
C36 | C39 | C41 | 109.3° | 109.4° |
C36 | C39 | C45 | 110.6° | 109.5° |
C36 | C39 | H39 | 108.8° | 109.5° |
H361 | C36 | H362 | 109.1° | 109.5° |
C41 | C39 | C45 | 109.5° | 109.5° |
C41 | C39 | H39 | 110.0° | 109.5° |
C39 | C41 | H411 | 109.5° | 109.5° |
C39 | C41 | H412 | 109.5° | 109.5° |
C39 | C41 | H413 | 109.4° | 109.5° |
C45 | C39 | H39 | 108.6° | 109.4° |
C39 | C45 | H451 | 109.5° | 109.5° |
C39 | C45 | H452 | 109.5° | 109.4° |
C39 | C45 | H453 | 109.5° | 109.5° |
H411 | C41 | H412 | 109.5° | 109.4° |
H411 | C41 | H413 | 109.5° | 109.5° |
H412 | C41 | H413 | 109.5° | 109.4° |
H451 | C45 | H452 | 109.4° | 109.5° |
H451 | C45 | H453 | 109.5° | 109.5° |
H452 | C45 | H453 | 109.5° | 109.4° |
C | OXT | HXT | 90.0° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | C5 | C36 | 123.6° | 120.0° |
N | CA | C5 | HA | 117.5° | 120.0° |
N | CA | C36 | HA | 117.9° | 120.0° |
N | CA | C5 | O7 | 61.3° | 60.0° |
N | CA | C5 | C9 | 61.3° | 60.0° |
N | CA | C5 | H5 | 179.7° | 180.0° |
N | CA | C36 | C39 | 62.7° | 65.1° |
N | CA | C36 | H361 | 57.3° | 54.8° |
N | CA | C36 | H362 | 177.3° | 174.9° |
H | N | CA | C5 | 180.0° | 66.8° |
H | N | CA | C36 | 55.4° | 53.2° |
H | N | CA | HA | 63.6° | 173.3° |
C5 | CA | C36 | HA | 116.5° | 120.0° |
CA | C5 | O7 | C9 | 124.9° | 120.0° |
CA | C5 | O7 | H5 | 116.3° | 120.0° |
CA | C5 | C9 | H5 | 116.3° | 120.0° |
CA | C5 | O7 | HO7 | 180.0° | 60.0° |
CA | C5 | C9 | C11 | 168.1° | 180.0° |
CA | C5 | C9 | C19 | 79.3° | 62.8° |
CA | C5 | C9 | H9 | 43.5° | 58.7° |
C5 | CA | C36 | C39 | 171.7° | 174.8° |
C5 | CA | C36 | H361 | 68.3° | 65.2° |
C5 | CA | C36 | H362 | 51.7° | 54.9° |
C5 | CA | N | H2 | 60.0° | 169.3° |
C36 | CA | C5 | O7 | 62.3° | 60.0° |
C36 | CA | C5 | C9 | 175.1° | NaN° |
C36 | CA | C5 | H5 | 56.6° | 59.9° |
CA | C36 | C39 | H361 | 120.0° | 120.0° |
CA | C36 | C39 | H362 | 120.0° | 120.0° |
CA | C36 | H361 | H362 | 120.4° | 120.0° |
CA | C36 | C39 | C41 | 72.9° | 174.1° |
CA | C36 | C39 | C45 | 166.5° | 65.8° |
CA | C36 | C39 | H39 | 47.2° | 54.1° |
C36 | CA | N | H2 | 175.4° | 70.7° |
HA | CA | C5 | O7 | 178.9° | 180.0° |
HA | CA | C5 | C9 | 56.3° | 60.0° |
HA | CA | C5 | H5 | 62.2° | 60.0° |
HA | CA | C36 | C39 | 55.2° | 54.9° |
HA | CA | C36 | H361 | 175.2° | 174.8° |
HA | CA | C36 | H362 | 64.8° | 65.1° |
HA | CA | N | H2 | 56.4° | 49.3° |
O7 | C5 | C9 | H5 | 119.2° | 120.1° |
O7 | C5 | C9 | C11 | 67.4° | 60.0° |
O7 | C5 | C9 | C19 | 45.3° | 57.1° |
O7 | C5 | C9 | H9 | 168.0° | 178.6° |
C9 | C5 | O7 | HO7 | 55.1° | 60.0° |
C5 | C9 | C11 | C19 | 114.8° | 119.3° |
C5 | C9 | C11 | H9 | 122.8° | 121.3° |
C5 | C9 | C19 | H9 | 123.4° | 121.4° |
C5 | C9 | C11 | C13 | 136.4° | 119.3° |
C5 | C9 | C11 | C | 100.6° | 121.4° |
C5 | C9 | C11 | H11 | 16.4° | 0.0° |
C5 | C9 | C19 | C16 | 118.1° | 142.9° |
C5 | C9 | C19 | H191 | 2.0° | 24.2° |
C5 | C9 | C19 | H192 | 121.9° | 98.4° |
H5 | C5 | O7 | HO7 | 63.7° | 179.9° |
H5 | C5 | C9 | C11 | 51.8° | 60.0° |
H5 | C5 | C9 | C19 | 164.5° | 177.2° |
H5 | C5 | C9 | H9 | 72.8° | 61.4° |
C11 | C9 | C19 | H9 | 124.8° | 119.3° |
C9 | C11 | C13 | C | 122.6° | 119.3° |
C9 | C11 | C13 | H11 | 120.5° | 119.3° |
C9 | C11 | C | H11 | 120.3° | 121.4° |
C9 | C11 | C13 | C16 | 28.5° | 23.6° |
C9 | C11 | C13 | H131 | 91.5° | 142.3° |
C9 | C11 | C13 | H132 | 148.5° | 95.0° |
C11 | C9 | C19 | C16 | 6.3° | 23.6° |
C11 | C9 | C19 | H191 | 113.7° | 95.1° |
C11 | C9 | C19 | H192 | 126.3° | 142.3° |
C9 | C11 | C | O | 37.0° | 0.0° |
C9 | C11 | C | OXT | 141.2° | 180.0° |
C19 | C9 | C11 | C13 | 21.6° | 0.0° |
C19 | C9 | C11 | C | 144.6° | 119.3° |
C19 | C9 | C11 | H11 | 98.5° | 119.3° |
C9 | C19 | C16 | C13 | 11.0° | 37.9° |
C9 | C19 | C16 | H191 | 120.0° | 118.7° |
C9 | C19 | C16 | H192 | 120.0° | 118.7° |
C9 | C19 | C16 | H161 | 131.0° | 80.4° |
C9 | C19 | C16 | H162 | 108.9° | 156.3° |
C9 | C19 | H191 | H192 | 120.9° | 122.6° |
H9 | C9 | C11 | C13 | 100.8° | 119.4° |
H9 | C9 | C11 | C | 22.3° | 0.1° |
H9 | C9 | C11 | H11 | 139.2° | 121.3° |
H9 | C9 | C19 | C16 | 118.5° | 95.7° |
H9 | C9 | C19 | H191 | 121.5° | 145.6° |
H9 | C9 | C19 | H192 | 1.5° | 23.0° |
C13 | C11 | C | H11 | 119.8° | 121.4° |
C11 | C13 | C16 | H131 | 120.0° | 118.7° |
C11 | C13 | C16 | H132 | 120.0° | 118.6° |
C11 | C13 | H131 | H132 | 121.6° | 122.6° |
C11 | C13 | C16 | C19 | 24.4° | 37.9° |
C11 | C13 | C16 | H161 | 144.5° | 80.4° |
C11 | C13 | C16 | H162 | 95.5° | 156.3° |
C13 | C11 | C | O | 82.8° | 117.2° |
C13 | C11 | C | OXT | 21.4° | 62.8° |
C | C11 | C13 | C16 | 151.1° | 95.7° |
C | C11 | C13 | H131 | 31.1° | 23.0° |
C | C11 | C13 | H132 | 88.9° | 145.7° |
C11 | C | O | OXT | 20.6° | 179.9° |
C11 | C | OXT | HXT | 90.0° | 180.0° |
H11 | C11 | C13 | C16 | 92.0° | 142.9° |
H11 | C11 | C13 | H131 | 148.0° | 98.4° |
H11 | C11 | C13 | H132 | 28.0° | 24.3° |
H11 | C11 | C | O | 157.3° | 121.4° |
H11 | C11 | C | OXT | 98.4° | 58.6° |
C16 | C13 | H131 | H132 | 121.6° | 122.6° |
C13 | C16 | C19 | H161 | 120.0° | 118.3° |
C13 | C16 | C19 | H162 | 120.0° | 118.4° |
C13 | C16 | H161 | H162 | 121.0° | 123.3° |
C13 | C16 | C19 | H191 | 131.1° | 80.8° |
C13 | C16 | C19 | H192 | 109.0° | 156.6° |
H131 | C13 | C16 | C19 | 95.5° | 156.6° |
H131 | C13 | C16 | H161 | 24.5° | 38.3° |
H131 | C13 | C16 | H162 | 144.5° | 85.0° |
H132 | C13 | C16 | C19 | 144.4° | 80.7° |
H132 | C13 | C16 | H161 | 95.6° | 161.0° |
H132 | C13 | C16 | H162 | 24.4° | 37.6° |
C19 | C16 | H161 | H162 | 121.1° | 123.3° |
C16 | C19 | H191 | H192 | 120.9° | 122.6° |
H161 | C16 | C19 | H191 | 109.0° | 160.9° |
H161 | C16 | C19 | H192 | 11.0° | 38.4° |
H162 | C16 | C19 | H191 | 11.1° | 37.6° |
H162 | C16 | C19 | H192 | 131.1° | 85.0° |
O | C | OXT | HXT | 90.0° | 0.0° |
C39 | C36 | H361 | H362 | 120.4° | 120.0° |
C36 | C39 | C41 | C45 | 121.3° | 120.0° |
C36 | C39 | C41 | H39 | 119.4° | 120.0° |
C36 | C39 | C45 | H39 | 119.4° | 120.0° |
C36 | C39 | C41 | H411 | 180.0° | 59.6° |
C36 | C39 | C41 | H412 | 60.0° | 179.5° |
C36 | C39 | C41 | H413 | 60.0° | 60.5° |
C36 | C39 | C45 | H451 | 180.0° | 60.0° |
C36 | C39 | C45 | H452 | 60.0° | 180.0° |
C36 | C39 | C45 | H453 | 60.0° | 60.0° |
H361 | C36 | C39 | C41 | 167.1° | 54.2° |
H361 | C36 | C39 | C45 | 46.5° | 174.2° |
H361 | C36 | C39 | H39 | 72.8° | 65.9° |
H362 | C36 | C39 | C41 | 47.1° | 65.9° |
H362 | C36 | C39 | C45 | 73.5° | 54.2° |
H362 | C36 | C39 | H39 | 167.3° | 174.1° |
C41 | C39 | C45 | H39 | 120.1° | 120.1° |
C39 | C41 | H411 | H412 | 120.0° | 120.0° |
C39 | C41 | H411 | H413 | 120.0° | 120.1° |
C39 | C41 | H412 | H413 | 120.0° | 120.0° |
C41 | C39 | C45 | H451 | 59.5° | 180.0° |
C41 | C39 | C45 | H452 | 179.4° | 60.0° |
C41 | C39 | C45 | H453 | 60.5° | 59.9° |
C45 | C39 | C41 | H411 | 58.7° | 60.4° |
C45 | C39 | C41 | H412 | 61.3° | 59.6° |
C45 | C39 | C41 | H413 | 178.7° | 179.5° |
C39 | C45 | H451 | H452 | 120.0° | 120.0° |
C39 | C45 | H451 | H453 | 120.0° | 120.0° |
C39 | C45 | H452 | H453 | 120.0° | 119.9° |
H39 | C39 | C41 | H411 | 60.6° | 179.6° |
H39 | C39 | C41 | H412 | 179.4° | 60.5° |
H39 | C39 | C41 | H413 | 59.4° | 59.5° |
H39 | C39 | C45 | H451 | 60.6° | 60.0° |
H39 | C39 | C45 | H452 | 59.3° | 60.1° |
H39 | C39 | C45 | H453 | 179.4° | 180.0° |
H411 | C41 | H412 | H413 | 120.0° | 119.9° |
H451 | C45 | H452 | H453 | 120.0° | 120.0° |