1XD
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
F30 | C25 | sing | 1.35Å | 1.35Å | |
C25 | C24 | doub | 1.38Å | 1.39Å | Aromatic |
C25 | C26 | sing | 1.38Å | 1.39Å | Aromatic |
C24 | C23 | sing | 1.38Å | 1.38Å | Aromatic |
C26 | C27 | doub | 1.39Å | 1.39Å | Aromatic |
O22 | S20 | doub | 1.42Å | 1.42Å | |
C23 | C28 | doub | 1.38Å | 1.38Å | Aromatic |
C23 | S20 | sing | 1.76Å | 1.76Å | |
C27 | C28 | sing | 1.38Å | 1.39Å | Aromatic |
C27 | F29 | sing | 1.35Å | 1.35Å | |
S20 | O21 | doub | 1.42Å | 1.42Å | |
S20 | C3 | sing | 1.76Å | 1.76Å | |
C4 | C3 | doub | 1.38Å | 1.38Å | Aromatic |
C4 | C5 | sing | 1.38Å | 1.38Å | Aromatic |
C3 | C2 | sing | 1.38Å | 1.38Å | Aromatic |
C5 | C6 | doub | 1.38Å | 1.38Å | Aromatic |
C2 | C1 | doub | 1.38Å | 1.38Å | Aromatic |
C6 | C1 | sing | 1.38Å | 1.38Å | Aromatic |
C6 | C7 | sing | 1.51Å | 1.50Å | |
C7 | N8 | sing | 1.46Å | 1.47Å | |
O10 | C9 | doub | 1.22Å | 1.22Å | |
N8 | C9 | sing | 1.35Å | 1.35Å | |
C9 | C11 | sing | 1.48Å | 1.48Å | |
C11 | C19 | doub | 1.38Å | 1.39Å | Aromatic |
C11 | C12 | sing | 1.42Å | 1.42Å | Aromatic |
C19 | C18 | sing | 1.41Å | 1.41Å | Aromatic |
C12 | C13 | doub | 1.35Å | 1.34Å | Aromatic |
C18 | N17 | doub | 1.33Å | 1.33Å | Aromatic |
C18 | N14 | sing | 1.37Å | 1.37Å | Aromatic |
C13 | N14 | sing | 1.37Å | 1.37Å | Aromatic |
N17 | C16 | sing | 1.33Å | 1.33Å | Aromatic |
N14 | C15 | sing | 1.37Å | 1.37Å | Aromatic |
C16 | C15 | doub | 1.35Å | 1.36Å | Aromatic |
C4 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H2 | sing | 1.08Å | 1.08Å | |
C7 | H3 | sing | 1.09Å | 1.10Å | |
C7 | H4 | sing | 1.09Å | 1.10Å | |
C13 | H5 | sing | 1.08Å | 1.08Å | |
C15 | H6 | sing | 1.08Å | 1.08Å | |
C24 | H7 | sing | 1.08Å | 1.08Å | |
C26 | H8 | sing | 1.08Å | 1.08Å | |
C28 | H9 | sing | 1.08Å | 1.08Å | |
C1 | H10 | sing | 1.08Å | 1.08Å | |
C2 | H11 | sing | 1.08Å | 1.08Å | |
N8 | H12 | sing | 0.97Å | 1.00Å | |
C12 | H13 | sing | 1.08Å | 1.08Å | |
C16 | H14 | sing | 1.08Å | 1.08Å | |
C19 | H15 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
F30 | C25 | C24 | 120.1° | 120.0° |
F30 | C25 | C26 | 119.9° | 120.0° |
C24 | C25 | C26 | 120.0° | 120.0° |
C25 | C24 | C23 | 119.9° | 120.0° |
C25 | C24 | H7 | 120.1° | 120.0° |
C25 | C26 | C27 | 120.0° | 119.9° |
C25 | C26 | H8 | 120.0° | 120.1° |
C24 | C23 | C28 | 120.2° | 120.1° |
C24 | C23 | S20 | 120.7° | 120.0° |
C23 | C24 | H7 | 120.1° | 120.0° |
C26 | C27 | C28 | 119.8° | 119.9° |
C26 | C27 | F29 | 120.1° | 120.0° |
C27 | C26 | H8 | 120.0° | 120.0° |
O22 | S20 | C23 | 107.8° | 106.4° |
O22 | S20 | O21 | 123.7° | 123.2° |
O22 | S20 | C3 | 106.5° | 106.4° |
C28 | C23 | S20 | 119.1° | 120.0° |
C23 | C28 | C27 | 120.1° | 120.0° |
C23 | C28 | H9 | 119.9° | 120.0° |
C23 | S20 | O21 | 107.7° | 106.5° |
C23 | S20 | C3 | 101.7° | 107.2° |
C28 | C27 | F29 | 120.0° | 120.1° |
C27 | C28 | H9 | 119.9° | 120.0° |
O21 | S20 | C3 | 107.3° | 106.4° |
S20 | C3 | C4 | 119.0° | 120.0° |
S20 | C3 | C2 | 120.7° | 120.0° |
C3 | C4 | C5 | 119.5° | 120.0° |
C4 | C3 | C2 | 120.3° | 120.0° |
C3 | C4 | H1 | 120.3° | 120.0° |
C4 | C5 | C6 | 120.5° | 120.0° |
C5 | C4 | H1 | 120.2° | 120.0° |
C4 | C5 | H2 | 119.8° | 120.0° |
C3 | C2 | C1 | 120.0° | 120.0° |
C3 | C2 | H11 | 120.0° | 120.1° |
C5 | C6 | C1 | 119.9° | 120.0° |
C5 | C6 | C7 | 118.9° | 120.0° |
C6 | C5 | H2 | 119.7° | 120.0° |
C2 | C1 | C6 | 119.6° | 120.0° |
C2 | C1 | H10 | 120.2° | 120.0° |
C1 | C2 | H11 | 120.0° | 120.0° |
C1 | C6 | C7 | 121.1° | 120.1° |
C6 | C1 | H10 | 120.2° | 120.0° |
C6 | C7 | N8 | 114.9° | 109.4° |
C6 | C7 | H3 | 108.1° | 109.4° |
C6 | C7 | H4 | 108.1° | 109.5° |
C7 | N8 | C9 | 121.8° | 120.0° |
N8 | C7 | H3 | 108.1° | 109.4° |
N8 | C7 | H4 | 108.1° | 109.5° |
C7 | N8 | H12 | 119.1° | 120.1° |
O10 | C9 | N8 | 120.5° | 120.0° |
O10 | C9 | C11 | 120.6° | 120.0° |
N8 | C9 | C11 | 118.9° | 120.0° |
C9 | N8 | H12 | 119.1° | 119.9° |
C9 | C11 | C19 | 121.2° | 120.4° |
C9 | C11 | C12 | 119.8° | 120.4° |
C19 | C11 | C12 | 118.9° | 119.2° |
C11 | C19 | C18 | 118.9° | 119.1° |
C11 | C19 | H15 | 120.6° | 120.4° |
C11 | C12 | C13 | 120.8° | 120.2° |
C11 | C12 | H13 | 119.6° | 119.9° |
C19 | C18 | N17 | 132.2° | 132.2° |
C19 | C18 | N14 | 120.1° | 119.7° |
C18 | C19 | H15 | 120.6° | 120.4° |
C12 | C13 | N14 | 120.6° | 120.9° |
C12 | C13 | H5 | 119.7° | 119.5° |
C13 | C12 | H13 | 119.6° | 119.9° |
N17 | C18 | N14 | 107.7° | 108.1° |
C18 | N17 | C16 | 109.6° | 109.1° |
C18 | N14 | C13 | 120.7° | 120.8° |
C18 | N14 | C15 | 107.0° | 106.9° |
C13 | N14 | C15 | 132.3° | 132.2° |
N14 | C13 | H5 | 119.7° | 119.6° |
N17 | C16 | C15 | 108.2° | 108.6° |
N17 | C16 | H14 | 125.9° | 125.6° |
N14 | C15 | C16 | 107.5° | 107.2° |
N14 | C15 | H6 | 126.3° | 126.4° |
C16 | C15 | H6 | 126.2° | 126.4° |
C15 | C16 | H14 | 125.9° | 125.7° |
H3 | C7 | H4 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
F30 | C25 | C24 | C26 | 179.9° | 179.9° |
F30 | C25 | C24 | C23 | 179.6° | 180.0° |
F30 | C25 | C26 | C27 | 180.0° | 180.0° |
F30 | C25 | C24 | H7 | 0.4° | 0.3° |
F30 | C25 | C26 | H8 | 0.1° | 0.3° |
C25 | C24 | C23 | H7 | 180.0° | 179.7° |
C24 | C25 | C26 | C27 | 0.1° | 0.1° |
C25 | C24 | C23 | C28 | 0.8° | 0.3° |
C25 | C24 | C23 | S20 | 179.3° | 179.8° |
C24 | C25 | C26 | H8 | 179.9° | 179.8° |
C26 | C25 | C24 | C23 | 0.3° | 0.1° |
C25 | C26 | C27 | H8 | 180.0° | 179.7° |
C25 | C26 | C27 | C28 | 0.1° | 0.3° |
C25 | C26 | C27 | F29 | 179.9° | 179.7° |
C26 | C25 | C24 | H7 | 179.6° | 179.8° |
C24 | C23 | S20 | O22 | 2.7° | 156.5° |
C24 | C23 | C28 | S20 | 178.5° | 179.9° |
C24 | C23 | C28 | C27 | 0.8° | 0.5° |
C24 | C23 | S20 | O21 | 138.2° | 23.5° |
C24 | C23 | S20 | C3 | 109.1° | 90.0° |
C24 | C23 | C28 | H9 | 179.3° | 180.0° |
C26 | C27 | C28 | C23 | 0.3° | 0.5° |
C26 | C27 | C28 | F29 | 180.0° | 180.0° |
C26 | C27 | C28 | H9 | 179.7° | 180.0° |
O22 | S20 | C23 | C28 | 178.8° | 23.5° |
O22 | S20 | C23 | O21 | 135.5° | 133.0° |
O22 | S20 | C23 | C3 | 111.8° | 113.5° |
O22 | S20 | O21 | C3 | 124.4° | 122.9° |
O22 | S20 | C3 | C4 | 26.8° | 23.6° |
O22 | S20 | C3 | C2 | 154.6° | 156.5° |
C23 | C28 | C27 | H9 | 180.0° | 179.5° |
C23 | C28 | C27 | F29 | 179.7° | 179.5° |
C28 | C23 | S20 | O21 | 43.2° | 156.4° |
C28 | C23 | S20 | C3 | 69.4° | 90.1° |
C28 | C23 | C24 | H7 | 179.2° | 180.0° |
S20 | C23 | C28 | C27 | 179.3° | 179.6° |
C23 | S20 | O21 | C3 | 108.9° | 114.1° |
C23 | S20 | C3 | C4 | 85.9° | 90.0° |
C23 | S20 | C3 | C2 | 92.6° | 90.0° |
S20 | C23 | C24 | H7 | 0.7° | 0.1° |
S20 | C23 | C28 | H9 | 0.7° | 0.0° |
C28 | C27 | C26 | H8 | 179.9° | 180.0° |
F29 | C27 | C26 | H8 | 0.1° | 0.0° |
F29 | C27 | C28 | H9 | 0.3° | 0.0° |
O21 | S20 | C3 | C4 | 161.1° | 156.4° |
O21 | S20 | C3 | C2 | 20.4° | 23.6° |
S20 | C3 | C4 | C2 | 178.5° | 179.9° |
S20 | C3 | C4 | C5 | 179.4° | 179.9° |
S20 | C3 | C2 | C1 | 179.4° | 179.9° |
S20 | C3 | C4 | H1 | 0.6° | 0.3° |
S20 | C3 | C2 | H11 | 0.6° | 0.1° |
C3 | C4 | C5 | H1 | 180.0° | 179.8° |
C3 | C4 | C5 | C6 | 0.0° | 0.0° |
C4 | C3 | C2 | C1 | 0.9° | 0.0° |
C3 | C4 | C5 | H2 | 180.0° | 180.0° |
C4 | C3 | C2 | H11 | 179.1° | 180.0° |
C5 | C4 | C3 | C2 | 0.9° | 0.0° |
C4 | C5 | C6 | H2 | 180.0° | 180.0° |
C4 | C5 | C6 | C1 | 0.7° | 0.0° |
C4 | C5 | C6 | C7 | 179.5° | 180.0° |
C3 | C2 | C1 | H11 | 180.0° | 180.0° |
C3 | C2 | C1 | C6 | 0.1° | 0.0° |
C2 | C3 | C4 | H1 | 179.1° | 179.8° |
C3 | C2 | C1 | H10 | 179.9° | 179.9° |
C5 | C6 | C1 | C2 | 0.7° | 0.0° |
C5 | C6 | C1 | C7 | 178.7° | 180.0° |
C5 | C6 | C7 | N8 | 141.4° | 90.1° |
C6 | C5 | C4 | H1 | 179.9° | 179.7° |
C5 | C6 | C7 | H3 | 97.8° | 150.0° |
C5 | C6 | C7 | H4 | 20.6° | 30.0° |
C5 | C6 | C1 | H10 | 179.3° | 180.0° |
C2 | C1 | C6 | H10 | 180.0° | 180.0° |
C2 | C1 | C6 | C7 | 179.4° | 180.0° |
C1 | C6 | C7 | N8 | 39.9° | 90.0° |
C1 | C6 | C5 | H2 | 179.3° | 180.0° |
C1 | C6 | C7 | H3 | 81.0° | 29.9° |
C1 | C6 | C7 | H4 | 160.7° | 150.0° |
C6 | C1 | C2 | H11 | 179.9° | 180.0° |
C6 | C7 | N8 | H3 | 120.8° | 119.9° |
C6 | C7 | N8 | H4 | 120.8° | 120.0° |
C6 | C7 | N8 | C9 | 85.7° | 180.0° |
C7 | C6 | C5 | H2 | 0.5° | 0.0° |
C6 | C7 | H3 | H4 | 117.5° | 120.1° |
C7 | C6 | C1 | H10 | 0.6° | 0.1° |
C6 | C7 | N8 | H12 | 94.3° | 0.1° |
C7 | N8 | C9 | O10 | 0.8° | 0.0° |
C7 | N8 | C9 | H12 | 180.0° | 180.0° |
C7 | N8 | C9 | C11 | 178.9° | 180.0° |
N8 | C7 | H3 | H4 | 117.5° | 120.0° |
O10 | C9 | N8 | C11 | 179.7° | 180.0° |
O10 | C9 | C11 | C19 | 0.2° | 0.0° |
O10 | C9 | C11 | C12 | 179.7° | 179.1° |
O10 | C9 | N8 | H12 | 179.1° | 180.0° |
N8 | C9 | C11 | C19 | 179.5° | 180.0° |
N8 | C9 | C11 | C12 | 0.0° | 0.9° |
C9 | N8 | C7 | H3 | 153.5° | 60.1° |
C9 | N8 | C7 | H4 | 35.1° | 60.0° |
C9 | C11 | C19 | C12 | 179.5° | 179.1° |
C9 | C11 | C19 | C18 | 179.8° | 180.0° |
C9 | C11 | C12 | C13 | 179.8° | 179.6° |
C11 | C9 | N8 | H12 | 1.2° | 0.0° |
C9 | C11 | C12 | H13 | 0.2° | 0.3° |
C9 | C11 | C19 | H15 | 0.2° | 0.9° |
C11 | C19 | C18 | H15 | 180.0° | 179.1° |
C19 | C11 | C12 | C13 | 0.3° | 0.6° |
C11 | C19 | C18 | N17 | 179.7° | 179.3° |
C11 | C19 | C18 | N14 | 0.1° | 0.6° |
C19 | C11 | C12 | H13 | 179.7° | 179.4° |
C12 | C11 | C19 | C18 | 0.2° | 0.9° |
C11 | C12 | C13 | H13 | 180.0° | 179.9° |
C11 | C12 | C13 | N14 | 0.2° | 0.1° |
C11 | C12 | C13 | H5 | 179.8° | 179.7° |
C12 | C11 | C19 | H15 | 179.8° | 180.0° |
C19 | C18 | N17 | N14 | 179.8° | 180.0° |
C19 | C18 | N14 | C13 | 0.1° | 0.0° |
C19 | C18 | N17 | C16 | 180.0° | 180.0° |
C19 | C18 | N14 | C15 | 179.9° | 180.0° |
C12 | C13 | N14 | C18 | 0.0° | 0.4° |
C12 | C13 | N14 | H5 | 180.0° | 179.7° |
C12 | C13 | N14 | C15 | 180.0° | 179.7° |
N17 | C18 | N14 | C13 | 179.9° | 180.0° |
N17 | C18 | N14 | C15 | 0.1° | 0.1° |
C18 | N17 | C16 | C15 | 0.2° | 0.1° |
C18 | N17 | C16 | H14 | 179.8° | 180.0° |
N17 | C18 | C19 | H15 | 0.3° | 0.2° |
C18 | N14 | C13 | C15 | 180.0° | 180.0° |
N14 | C18 | N17 | C16 | 0.1° | 0.1° |
C18 | N14 | C15 | C16 | 0.0° | 0.0° |
C18 | N14 | C13 | H5 | 180.0° | 180.0° |
C18 | N14 | C15 | H6 | 180.0° | 180.0° |
N14 | C18 | C19 | H15 | 179.9° | 179.7° |
C13 | N14 | C15 | C16 | 180.0° | 180.0° |
C13 | N14 | C15 | H6 | 0.0° | 0.0° |
N14 | C13 | C12 | H13 | 179.8° | 180.0° |
N17 | C16 | C15 | N14 | 0.1° | 0.0° |
N17 | C16 | C15 | H14 | 180.0° | 179.9° |
N17 | C16 | C15 | H6 | 179.9° | 180.0° |
N14 | C15 | C16 | H6 | 180.0° | 180.0° |
C15 | N14 | C13 | H5 | 0.0° | 0.0° |
N14 | C15 | C16 | H14 | 179.9° | 180.0° |
H1 | C4 | C5 | H2 | 0.1° | 0.2° |
H3 | C7 | N8 | H12 | 26.5° | 120.0° |
H4 | C7 | N8 | H12 | 144.9° | 119.9° |
H5 | C13 | C12 | H13 | 0.2° | 0.3° |
H6 | C15 | C16 | H14 | 0.1° | 0.0° |
H10 | C1 | C2 | H11 | 0.1° | 0.0° |