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SummaryGeometryRelated PDB entries

1U5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O14C13doub1.21Å1.20Å
C05C04sing1.53Å1.49Å
C13C04sing1.54Å1.52Å
C13O12sing1.35Å1.37Å
C04C06sing1.56Å1.53Å
C04C02sing1.57Å1.61Å
C06C07sing1.55Å1.58Å
O12C08sing1.48Å1.44Å
C07C08sing1.56Å1.54Å
C02C08sing1.57Å1.57Å
C02C01sing1.53Å1.53Å
C02C03sing1.53Å1.53Å
C08C09sing1.51Å1.54Å
O11C09doub1.21Å1.25Å
C09O10sing1.34Å1.24Å
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C03H4sing1.09Å1.10Å
C03H5sing1.09Å1.10Å
C03H6sing1.09Å1.10Å
C05H7sing1.09Å1.10Å
C05H8sing1.09Å1.10Å
C05H9sing1.09Å1.10Å
C06H10sing1.09Å1.10Å
C06H11sing1.09Å1.10Å
C07H12sing1.09Å1.10Å
C07H13sing1.09Å1.10Å
O10H14sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O14C13C04131.4°126.2°
O14C13O12120.2°126.3°
C05C04C13114.7°117.3°
C05C04C06118.9°116.5°
C05C04C02116.4°116.9°
C04C05H7109.5°109.5°
C04C05H8109.5°109.4°
C04C05H9109.5°109.5°
C04C13O12108.3°107.4°
C13C04C06104.6°103.8°
C13C04C0297.2°99.1°
C13O12C08107.4°109.0°
C06C04C02102.0°100.4°
C04C06C07103.3°103.6°
C04C06H10111.0°110.6°
C04C06H11111.0°110.5°
C04C02C0891.4°93.6°
C04C02C01112.3°112.5°
C04C02C03113.4°112.6°
C06C07C08102.9°103.9°
C07C06H10111.0°110.7°
C07C06H11111.0°110.6°
C06C07H12111.1°110.5°
C06C07H13111.1°110.6°
O12C08C07105.2°104.3°
O12C08C02101.8°100.4°
O12C08C09110.8°116.7°
C07C08C02103.0°100.6°
C07C08C09118.7°116.0°
C08C07H12111.1°110.5°
C08C07H13111.1°110.5°
C08C02C01110.8°112.5°
C08C02C03115.4°112.5°
C02C08C09115.5°116.4°
C01C02C03112.1°112.1°
C02C01H1109.5°109.5°
C02C01H2109.4°109.4°
C02C01H3109.5°109.5°
C02C03H4109.5°109.5°
C02C03H5109.5°109.4°
C02C03H6109.5°109.5°
C08C09O11116.9°120.0°
C08C09O10117.0°120.0°
O11C09O10126.2°120.0°
C09O10H14109.5°117.0°
H1C01H2109.5°109.5°
H1C01H3109.5°109.4°
H2C01H3109.5°109.5°
H4C03H5109.5°109.5°
H4C03H6109.5°109.5°
H5C03H6109.5°109.5°
H7C05H8109.5°109.4°
H7C05H9109.5°109.5°
H8C05H9109.5°109.5°
H10C06H11109.5°110.7°
H12C07H13109.4°110.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O14C13C04C0525.0°20.5°
O14C13C04O12176.2°180.0°
O14C13C04C06107.0°109.6°
O14C13C04C02148.5°147.3°
O14C13O12C08177.8°179.3°
C05C04C13C06132.0°130.1°
C05C04C13C02123.5°126.8°
C05C04C13O12158.8°159.5°
C05C04C06C02129.6°127.3°
C05C04C06C07165.7°164.0°
C05C04C02C08173.0°176.1°
C05C04C02C0159.9°60.0°
C05C04C02C0368.4°67.7°
C04C05H7H8120.0°119.9°
C04C05H7H9120.0°120.1°
C04C05H8H9120.0°120.0°
C05C04C06H1046.7°45.4°
C05C04C06H1175.3°77.6°
C13C04C06C02100.9°102.1°
C13C04C06C0764.8°65.5°
C04C13O12C081.0°0.8°
C13C04C02C0850.8°49.1°
C13C04C02C0162.3°67.0°
C13C04C02C03169.4°165.2°
C13C04C05H7180.0°177.1°
C13C04C05H860.0°57.2°
C13C04C05H960.0°62.8°
C13C04C06H10176.2°175.9°
C13C04C06H1154.2°53.0°
O12C13C04C0669.2°70.4°
O12C13C04C0235.3°32.7°
C13O12C08C0771.9°69.7°
C13O12C08C0235.3°34.1°
C13O12C08C09158.6°160.8°
C04C06C07H10119.0°118.6°
C04C06C07H11119.0°118.4°
C04C06C07C080.3°0.7°
C06C04C02C0855.8°56.8°
C06C04C02C01169.0°172.9°
C06C04C02C0362.7°59.3°
C06C04C05H755.2°59.0°
C06C04C05H8175.2°179.0°
C06C04C05H964.8°61.0°
C04C06H10H11122.8°122.9°
C04C06C07H12119.3°119.3°
C04C06C07H13118.6°117.9°
C02C04C06C0736.1°36.6°
C04C02C08O1253.0°50.5°
C04C02C08C0755.9°56.3°
C04C02C08C01114.5°116.1°
C04C02C08C03116.8°116.3°
C04C02C01C03129.0°128.0°
C04C02C08C09173.1°177.4°
C04C02C01H1180.0°45.6°
C04C02C01H260.0°74.4°
C04C02C01H360.0°165.6°
C04C02C03H4180.0°165.6°
C04C02C03H560.0°74.3°
C04C02C03H660.0°45.6°
C02C04C05H767.5°59.6°
C02C04C05H852.5°60.3°
C02C04C05H9172.5°179.7°
C02C04C06H1083.0°82.0°
C02C04C06H11155.1°155.1°
C06C07C08O1269.6°68.3°
C06C07C08H12119.0°118.6°
C06C07C08H13119.0°118.7°
C06C07C08C0236.8°35.5°
C06C07C08C09165.8°161.9°
C07C06H10H11122.9°122.9°
C06C07H12H13123.0°122.8°
O12C08C07C02106.3°103.7°
O12C08C07C09124.6°129.8°
O12C08C02C09120.1°126.9°
O12C08C02C0161.5°65.6°
O12C08C02C03169.8°166.7°
O12C08C09O1111.0°143.4°
O12C08C09O10168.0°36.6°
O12C08C07H12171.5°173.1°
O12C08C07H1349.4°50.4°
C07C08C02C09131.0°126.2°
C07C08C02C01170.4°172.5°
C07C08C02C0360.9°59.9°
C07C08C09O11132.8°93.1°
C07C08C09O1046.2°87.0°
C08C07C06H10118.7°117.8°
C08C07C06H11119.4°119.2°
C08C07H12H13123.0°122.7°
C08C02C01C03130.4°127.9°
C02C08C09O11104.1°25.0°
C02C08C09O1076.9°155.0°
C08C02C01H179.4°58.5°
C08C02C01H240.6°178.5°
C08C02C01H3160.6°61.5°
C08C02C03H476.4°61.4°
C08C02C03H5163.6°178.5°
C08C02C03H643.6°58.6°
C02C08C07H1282.2°83.1°
C02C08C07H13155.7°154.1°
C01C02C08C0958.6°61.3°
C02C01H1H2120.0°120.0°
C02C01H1H3120.0°120.0°
C02C01H2H3120.0°120.0°
C01C02C03H451.6°66.4°
C01C02C03H568.4°53.6°
C01C02C03H6171.6°173.6°
C03C02C08C0970.1°66.3°
C03C02C01H151.0°173.6°
C03C02C01H2171.1°53.6°
C03C02C01H369.0°66.4°
C02C03H4H5120.0°120.0°
C02C03H4H6120.0°120.0°
C02C03H5H6120.0°120.0°
C08C09O11O10178.9°180.0°
C09C08C07H1246.8°43.3°
C09C08C07H1375.2°79.4°
C08C09O10H14178.9°180.0°
O11C09O10H140.0°0.0°
H1C01H2H3120.0°120.0°
H4C03H5H6120.0°120.1°
H7C05H8H9120.0°120.0°
H10C06C07H120.3°0.7°
H10C06C07H13122.3°123.6°
H11C06C07H12121.7°122.3°
H11C06C07H130.4°0.6°

224931

PDB entries from 2024-09-11

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