1PI
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.37Å | |
C | CA | sing | 1.51Å | 1.44Å | |
C | H4 | sing | 1.08Å | 1.08Å | |
CA | N | sing | 1.47Å | 1.42Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
C1 | CG | sing | 1.53Å | 1.55Å | |
C1 | C2 | sing | 1.53Å | 1.69Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C1 | H1A | sing | 1.09Å | 1.10Å | |
C2 | C3 | sing | 1.53Å | 1.66Å | |
C2 | H2B | sing | 1.09Å | 1.10Å | |
C2 | H2A | sing | 1.09Å | 1.10Å | |
C3 | NE | sing | 1.47Å | 1.62Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C3 | H3A | sing | 1.09Å | 1.10Å | |
CA | CB | sing | 1.53Å | 1.42Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.53Å | 1.44Å | |
CB | HB | sing | 1.09Å | 1.10Å | |
CB | HBA | sing | 1.09Å | 1.10Å | |
CG | CD | sing | 1.53Å | 1.57Å | |
CD | NE | sing | 1.47Å | 1.41Å | |
CD | HD | sing | 1.09Å | 1.10Å | |
CD | HDA | sing | 1.09Å | 1.10Å | |
NE | CZ | sing | 1.37Å | 1.37Å | |
CG | HG | sing | 1.09Å | 1.10Å | |
CZ | NH1 | doub | 1.30Å | 1.31Å | |
CZ | NH2 | sing | 1.37Å | 1.25Å | |
NH1 | HNH1 | sing | 0.97Å | 1.00Å | |
NH2 | HNH2 | sing | 0.97Å | 1.00Å | |
NH2 | HNHA | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 135.4° | 120.0° |
O | C | H4 | 112.3° | 120.0° |
CA | C | H4 | 112.3° | 120.0° |
C | CA | N | 114.9° | 109.5° |
C | CA | CB | 115.2° | 109.4° |
C | CA | HA | 100.1° | 109.5° |
CA | N | H | 109.5° | 111.1° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | CB | 105.5° | 109.4° |
N | CA | HA | 110.8° | 109.5° |
H | N | H2 | 109.4° | 111.0° |
CG | C1 | C2 | 94.2° | 109.5° |
CG | C1 | H1 | 114.9° | 109.4° |
CG | C1 | H1A | 114.9° | 109.5° |
C1 | CG | CB | 96.0° | 109.5° |
C1 | CG | CD | 113.1° | 109.4° |
C1 | CG | HG | 114.7° | 109.5° |
C2 | C1 | H1 | 114.9° | 109.4° |
C2 | C1 | H1A | 114.9° | 109.4° |
C1 | C2 | C3 | 104.7° | 109.3° |
C1 | C2 | H2B | 111.1° | 109.5° |
C1 | C2 | H2A | 111.1° | 109.5° |
H1 | C1 | H1A | 103.5° | 109.5° |
C3 | C2 | H2B | 111.1° | 109.5° |
C3 | C2 | H2A | 111.1° | 109.5° |
C2 | C3 | NE | 110.2° | 108.8° |
C2 | C3 | H3 | 109.2° | 109.6° |
C2 | C3 | H3A | 109.2° | 109.6° |
H2B | C2 | H2A | 107.8° | 109.5° |
NE | C3 | H3 | 109.2° | 109.6° |
NE | C3 | H3A | 109.2° | 109.6° |
C3 | NE | CD | 106.4° | 118.7° |
C3 | NE | CZ | 120.3° | 120.6° |
H3 | C3 | H3A | 109.7° | 109.7° |
CB | CA | HA | 110.5° | 109.5° |
CA | CB | CG | 121.8° | 109.5° |
CA | CB | HB | 105.5° | 109.5° |
CA | CB | HBA | 105.6° | 109.4° |
CG | CB | HB | 105.6° | 109.5° |
CG | CB | HBA | 105.5° | 109.5° |
CB | CG | CD | 106.3° | 109.5° |
CB | CG | HG | 120.8° | 109.5° |
HB | CB | HBA | 113.1° | 109.5° |
CG | CD | NE | 117.0° | 108.8° |
CG | CD | HD | 107.1° | 109.6° |
CG | CD | HDA | 107.0° | 109.7° |
CD | CG | HG | 105.8° | 109.5° |
NE | CD | HD | 107.0° | 109.6° |
NE | CD | HDA | 107.0° | 109.5° |
CD | NE | CZ | 127.9° | 120.6° |
HD | CD | HDA | 111.8° | 109.6° |
NE | CZ | NH1 | 120.4° | 120.0° |
NE | CZ | NH2 | 123.1° | 120.0° |
NH1 | CZ | NH2 | 116.4° | 120.0° |
CZ | NH1 | HNH1 | 112.0° | 119.9° |
CZ | NH2 | HNH2 | 120.0° | 120.0° |
CZ | NH2 | HNHA | 120.0° | 120.0° |
HNH2 | NH2 | HNHA | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | H4 | 180.0° | 179.9° |
O | C | CA | N | 158.7° | 0.2° |
O | C | CA | CB | 35.8° | 119.8° |
O | C | CA | HA | 82.7° | 120.2° |
C | CA | N | CB | 127.9° | 119.9° |
C | CA | N | HA | 112.5° | 120.1° |
C | CA | N | H | 180.0° | 59.9° |
C | CA | N | H2 | 60.0° | 176.0° |
C | CA | CB | HA | 112.5° | 120.0° |
C | CA | CB | CG | 128.7° | 175.0° |
C | CA | CB | HB | 111.3° | 65.0° |
C | CA | CB | HBA | 8.7° | 55.0° |
H4 | C | CA | N | 21.3° | 180.0° |
H4 | C | CA | CB | 144.2° | 60.1° |
H4 | C | CA | HA | 97.3° | 59.9° |
CA | N | H | H2 | 120.0° | 124.1° |
N | CA | CB | HA | 119.8° | 120.0° |
N | CA | CB | CG | 103.6° | 65.0° |
N | CA | CB | HB | 16.4° | 55.0° |
N | CA | CB | HBA | 136.4° | 175.0° |
H | N | CA | CB | 52.1° | 60.0° |
H | N | CA | HA | 67.5° | 180.0° |
H2 | N | CA | CB | 172.1° | 64.0° |
H2 | N | CA | HA | 52.5° | 56.0° |
CG | C1 | C2 | H1 | 120.0° | 120.0° |
CG | C1 | C2 | H1A | 120.0° | 120.0° |
CG | C1 | H1 | H1A | 126.1° | 120.0° |
CG | C1 | C2 | C3 | 70.3° | 61.4° |
CG | C1 | C2 | H2B | 49.7° | 58.7° |
CG | C1 | C2 | H2A | 169.8° | 178.7° |
C1 | CG | CB | CA | 8.5° | 175.0° |
C1 | CG | CB | CD | 116.2° | 119.9° |
C1 | CG | CB | HG | 123.5° | 120.1° |
C1 | CG | CB | HB | 128.6° | 55.0° |
C1 | CG | CB | HBA | 111.5° | 65.0° |
C1 | CG | CD | HG | 126.4° | 120.0° |
C1 | CG | CD | NE | 67.2° | 54.6° |
C1 | CG | CD | HD | 52.8° | 174.4° |
C1 | CG | CD | HDA | 172.8° | 65.2° |
C2 | C1 | H1 | H1A | 126.1° | 120.0° |
C1 | C2 | C3 | H2B | 120.0° | 120.0° |
C1 | C2 | C3 | H2A | 120.0° | 119.9° |
C1 | C2 | H2B | H2A | 121.9° | 120.0° |
C1 | C2 | C3 | NE | 68.4° | 54.7° |
C1 | C2 | C3 | H3 | 171.6° | 174.4° |
C1 | C2 | C3 | H3A | 51.6° | 65.2° |
C2 | C1 | CG | CB | 179.8° | 178.7° |
C2 | C1 | CG | CD | 69.6° | 61.3° |
C2 | C1 | CG | HG | 51.9° | 58.6° |
H1 | C1 | C2 | C3 | 169.8° | 58.6° |
H1 | C1 | C2 | H2B | 70.3° | 178.6° |
H1 | C1 | C2 | H2A | 49.8° | 61.3° |
H1 | C1 | CG | CB | 59.9° | 61.3° |
H1 | C1 | CG | CD | 170.4° | 58.6° |
H1 | C1 | CG | HG | 68.1° | 178.6° |
H1A | C1 | C2 | C3 | 49.7° | 178.6° |
H1A | C1 | C2 | H2B | 169.7° | 61.3° |
H1A | C1 | C2 | H2A | 70.2° | 58.7° |
H1A | C1 | CG | CB | 60.1° | 58.7° |
H1A | C1 | CG | CD | 50.4° | 178.7° |
H1A | C1 | CG | HG | 171.9° | 61.4° |
C3 | C2 | H2B | H2A | 122.0° | 120.1° |
C2 | C3 | NE | H3 | 120.0° | 119.8° |
C2 | C3 | NE | H3A | 120.0° | 119.8° |
C2 | C3 | H3 | H3A | 119.7° | 120.3° |
C2 | C3 | NE | CD | 53.8° | 53.6° |
C2 | C3 | NE | CZ | 102.2° | 126.4° |
H2B | C2 | C3 | NE | 51.6° | 65.3° |
H2B | C2 | C3 | H3 | 68.4° | 54.4° |
H2B | C2 | C3 | H3A | 171.6° | 174.8° |
H2A | C2 | C3 | NE | 171.7° | 174.6° |
H2A | C2 | C3 | H3 | 51.6° | 65.6° |
H2A | C2 | C3 | H3A | 68.3° | 54.8° |
NE | C3 | H3 | H3A | 119.7° | 120.4° |
C3 | NE | CD | CG | 50.5° | 53.6° |
C3 | NE | CD | CZ | 153.5° | 180.0° |
C3 | NE | CD | HD | 69.5° | 173.4° |
C3 | NE | CD | HDA | 170.5° | 66.3° |
C3 | NE | CZ | NH1 | 155.6° | 174.6° |
C3 | NE | CZ | NH2 | 21.1° | 5.3° |
H3 | C3 | NE | CD | 173.8° | 173.4° |
H3 | C3 | NE | CZ | 17.8° | 6.6° |
H3A | C3 | NE | CD | 66.2° | 66.2° |
H3A | C3 | NE | CZ | 137.8° | 113.8° |
CA | CB | CG | HB | 120.0° | 120.0° |
CA | CB | CG | HBA | 120.0° | 120.0° |
CA | CB | HB | HBA | 114.9° | 120.0° |
CA | CB | CG | CD | 107.7° | 65.1° |
CA | CB | CG | HG | 132.1° | 54.9° |
HA | CA | CB | CG | 16.2° | 55.0° |
HA | CA | CB | HB | 136.2° | 175.0° |
HA | CA | CB | HBA | 103.8° | 65.0° |
CG | CB | HB | HBA | 114.9° | 120.0° |
CB | CG | CD | HG | 129.5° | 120.0° |
CB | CG | CD | NE | 171.4° | 174.6° |
CB | CG | CD | HD | 51.4° | 65.6° |
CB | CG | CD | HDA | 68.7° | 54.8° |
HB | CB | CG | CD | 12.3° | 174.9° |
HB | CB | CG | HG | 107.9° | 65.1° |
HBA | CB | CG | CD | 132.3° | 54.9° |
HBA | CB | CG | HG | 12.1° | 174.9° |
CG | CD | NE | HD | 120.0° | 119.8° |
CG | CD | NE | HDA | 120.0° | 119.8° |
CG | CD | HD | HDA | 116.9° | 120.4° |
CG | CD | NE | CZ | 103.1° | 126.4° |
NE | CD | HD | HDA | 116.9° | 120.2° |
NE | CD | CG | HG | 59.1° | 65.4° |
CD | NE | CZ | NH1 | 5.2° | 5.4° |
CD | NE | CZ | NH2 | 171.4° | 174.6° |
HD | CD | NE | CZ | 136.9° | 6.6° |
HD | CD | CG | HG | 179.1° | 54.4° |
HDA | CD | NE | CZ | 16.9° | 113.8° |
HDA | CD | CG | HG | 60.9° | 174.9° |
NE | CZ | NH1 | NH2 | 176.8° | 180.0° |
NE | CZ | NH1 | HNH1 | 176.8° | 180.0° |
NE | CZ | NH2 | HNH2 | 176.7° | 5.5° |
NE | CZ | NH2 | HNHA | 3.3° | 174.5° |
NH1 | CZ | NH2 | HNH2 | 0.0° | 174.5° |
NH1 | CZ | NH2 | HNHA | 180.0° | 5.5° |
NH2 | CZ | NH1 | HNH1 | 0.0° | 0.0° |
CZ | NH2 | HNH2 | HNHA | 180.0° | 180.0° |