0NP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C5' | C4' | sing | 1.53Å | 1.52Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C4' | O4' | sing | 1.45Å | 1.43Å | |
| C4' | C3' | sing | 1.55Å | 1.52Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| N3' | C3' | sing | 1.46Å | 1.45Å | |
| N3' | N18 | doub | 1.12Å | 1.28Å | |
| C3' | C2' | sing | 1.54Å | 1.51Å | |
| C1' | N1 | sing | 1.47Å | 1.46Å | |
| C1' | C2' | sing | 1.54Å | 1.52Å | |
| N18 | N19 | doub | 1.12Å | 1.26Å | |
| N1 | C6 | sing | 1.37Å | 1.33Å | |
| N1 | C2 | sing | 1.35Å | 1.41Å | |
| O2 | C2 | doub | 1.22Å | 1.25Å | |
| C6 | C5 | doub | 1.35Å | 1.39Å | |
| C2' | F2' | sing | 1.40Å | 1.36Å | |
| C2 | N3 | sing | 1.35Å | 1.33Å | |
| C5 | C4 | sing | 1.42Å | 1.39Å | |
| N3 | C4 | sing | 1.35Å | 1.34Å | |
| C4 | O4 | doub | 1.22Å | 1.25Å | |
| C6 | H1 | sing | 1.08Å | 1.08Å | |
| N19 | H2 | sing | 0.97Å | 1.00Å | |
| C3' | H3 | sing | 1.09Å | 1.10Å | |
| C4' | H4 | sing | 1.09Å | 1.10Å | |
| C5' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| O5' | H7 | sing | 0.97Å | 0.95Å | |
| C2' | H8 | sing | 1.09Å | 1.10Å | |
| C1' | H9 | sing | 1.09Å | 1.10Å | |
| N3 | H10 | sing | 0.97Å | 1.00Å | |
| C5 | H11 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C4' | C5' | O5' | 109.9° | 109.5° |
| C5' | C4' | O4' | 110.2° | 110.4° |
| C5' | C4' | C3' | 111.8° | 110.4° |
| C5' | C4' | H4 | 108.8° | 110.5° |
| C4' | C5' | H5 | 109.4° | 109.4° |
| C4' | C5' | H6 | 109.4° | 109.5° |
| O5' | C5' | H5 | 109.4° | 109.4° |
| O5' | C5' | H6 | 109.4° | 109.5° |
| C5' | O5' | H7 | 109.5° | 114.0° |
| O4' | C4' | C3' | 107.2° | 104.8° |
| C4' | O4' | C1' | 110.5° | 105.2° |
| O4' | C4' | H4 | 110.1° | 110.4° |
| C4' | C3' | N3' | 103.3° | 110.5° |
| C4' | C3' | C2' | 104.2° | 104.0° |
| C4' | C3' | H3 | 114.1° | 110.6° |
| C3' | C4' | H4 | 108.8° | 110.3° |
| O4' | C1' | N1 | 110.0° | 110.4° |
| O4' | C1' | C2' | 105.4° | 104.8° |
| O4' | C1' | H9 | 110.7° | 110.4° |
| C3' | N3' | N18 | 122.1° | 120.0° |
| N3' | C3' | C2' | 104.4° | 110.5° |
| N3' | C3' | H3 | 115.3° | 110.5° |
| N3' | N18 | N19 | 178.8° | 180.0° |
| C3' | C2' | C1' | 103.9° | 104.1° |
| C3' | C2' | F2' | 110.5° | 110.5° |
| C2' | C3' | H3 | 114.3° | 110.5° |
| C3' | C2' | H8 | 109.5° | 110.5° |
| N1 | C1' | C2' | 111.1° | 110.4° |
| C1' | N1 | C6 | 120.2° | 119.7° |
| C1' | N1 | C2 | 120.0° | 119.6° |
| N1 | C1' | H9 | 110.1° | 110.3° |
| C1' | C2' | F2' | 111.6° | 110.5° |
| C1' | C2' | H8 | 109.4° | 110.6° |
| C2' | C1' | H9 | 109.3° | 110.5° |
| N18 | N19 | H2 | 112.0° | 120.0° |
| C6 | N1 | C2 | 119.8° | 120.7° |
| N1 | C6 | C5 | 119.5° | 119.7° |
| N1 | C6 | H1 | 120.3° | 120.2° |
| N1 | C2 | O2 | 119.8° | 119.6° |
| N1 | C2 | N3 | 120.3° | 120.9° |
| O2 | C2 | N3 | 120.0° | 119.5° |
| C6 | C5 | C4 | 119.6° | 119.1° |
| C5 | C6 | H1 | 120.3° | 120.1° |
| C6 | C5 | H11 | 120.2° | 120.5° |
| F2' | C2' | H8 | 111.7° | 110.4° |
| C2 | N3 | C4 | 120.6° | 120.2° |
| C2 | N3 | H10 | 119.7° | 119.9° |
| C5 | C4 | N3 | 120.2° | 119.4° |
| C5 | C4 | O4 | 119.7° | 120.3° |
| C4 | C5 | H11 | 120.2° | 120.4° |
| N3 | C4 | O4 | 120.0° | 120.3° |
| C4 | N3 | H10 | 119.7° | 119.9° |
| H5 | C5' | H6 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C4' | C5' | O5' | H5 | 120.1° | 119.9° |
| C4' | C5' | O5' | H6 | 120.1° | 120.0° |
| C5' | C4' | O4' | C3' | 121.8° | 118.8° |
| C5' | C4' | O4' | H4 | 120.0° | 122.4° |
| C5' | C4' | C3' | H4 | 120.2° | 122.4° |
| C5' | C4' | O4' | C1' | 125.2° | 159.3° |
| C5' | C4' | C3' | N3' | 145.6° | 98.6° |
| C5' | C4' | C3' | C2' | 105.5° | 142.8° |
| C5' | C4' | C3' | H3 | 19.7° | 24.1° |
| C4' | C5' | H5 | H6 | 119.8° | 120.0° |
| C4' | C5' | O5' | H7 | 180.0° | 180.0° |
| O5' | C5' | C4' | O4' | 73.7° | 66.5° |
| O5' | C5' | C4' | C3' | 45.3° | 178.1° |
| O5' | C5' | C4' | H4 | 165.5° | 55.8° |
| O5' | C5' | H5 | H6 | 119.8° | 120.1° |
| O4' | C4' | C3' | H4 | 119.0° | 118.8° |
| O4' | C4' | C3' | N3' | 93.6° | 142.6° |
| O4' | C4' | C3' | C2' | 15.3° | 24.0° |
| C4' | O4' | C1' | N1 | 140.6° | 159.4° |
| C4' | O4' | C1' | C2' | 20.7° | 40.5° |
| O4' | C4' | C3' | H3 | 140.6° | 94.7° |
| O4' | C4' | C5' | H5 | 46.3° | 173.6° |
| O4' | C4' | C5' | H6 | 166.2° | 53.5° |
| C4' | O4' | C1' | H9 | 97.4° | 78.5° |
| C3' | C4' | O4' | C1' | 3.4° | 40.5° |
| C4' | C3' | N3' | C2' | 108.7° | 114.6° |
| C4' | C3' | N3' | H3 | 125.1° | 122.7° |
| C4' | C3' | N3' | N18 | 158.8° | 178.9° |
| C4' | C3' | C2' | H3 | 125.1° | 118.7° |
| C4' | C3' | C2' | C1' | 26.9° | 0.0° |
| C4' | C3' | C2' | F2' | 146.7° | 118.7° |
| C3' | C4' | C5' | H5 | 165.4° | 58.2° |
| C3' | C4' | C5' | H6 | 74.7° | 61.8° |
| C4' | C3' | C2' | H8 | 89.8° | 118.8° |
| O4' | C1' | C2' | C3' | 29.5° | 24.0° |
| O4' | C1' | N1 | C2' | 116.4° | 115.4° |
| O4' | C1' | N1 | H9 | 122.3° | 122.2° |
| O4' | C1' | C2' | H9 | 119.0° | 118.9° |
| O4' | C1' | N1 | C6 | 68.1° | 126.4° |
| O4' | C1' | N1 | C2 | 111.7° | 53.6° |
| O4' | C1' | C2' | F2' | 148.6° | 142.7° |
| C1' | O4' | C4' | H4 | 114.8° | 78.3° |
| O4' | C1' | C2' | H8 | 87.4° | 94.7° |
| N3' | C3' | C2' | H3 | 126.8° | 122.6° |
| N3' | C3' | C2' | C1' | 81.2° | 118.6° |
| C3' | N3' | N18 | N19 | 173.0° | 173.9° |
| N3' | C3' | C2' | F2' | 38.6° | 0.1° |
| N3' | C3' | C4' | H4 | 25.4° | 23.8° |
| N3' | C3' | C2' | H8 | 162.1° | 122.6° |
| N18 | N3' | C3' | C2' | 92.5° | 66.5° |
| N3' | N18 | N19 | H2 | 0.0° | 96.1° |
| N18 | N3' | C3' | H3 | 33.7° | 56.2° |
| C3' | C2' | C1' | N1 | 148.6° | 142.9° |
| C3' | C2' | C1' | F2' | 119.1° | 118.7° |
| C3' | C2' | C1' | H8 | 116.9° | 118.7° |
| C3' | C2' | F2' | H8 | 122.2° | 122.6° |
| C2' | C3' | C4' | H4 | 134.3° | 94.8° |
| C3' | C2' | C1' | H9 | 89.6° | 94.9° |
| N1 | C1' | C2' | H9 | 121.8° | 122.2° |
| C1' | N1 | C6 | C2 | 179.9° | 180.0° |
| C1' | N1 | C2 | O2 | 0.1° | 0.3° |
| C1' | N1 | C6 | C5 | 179.9° | 179.5° |
| N1 | C1' | C2' | F2' | 92.3° | 98.5° |
| C1' | N1 | C2 | N3 | 179.9° | 180.0° |
| C1' | N1 | C6 | H1 | 0.1° | 0.2° |
| N1 | C1' | C2' | H8 | 31.8° | 24.2° |
| C2' | C1' | N1 | C6 | 48.2° | 118.1° |
| C2' | C1' | N1 | C2 | 131.9° | 61.9° |
| C1' | C2' | F2' | H8 | 122.7° | 122.8° |
| C1' | C2' | C3' | H3 | 152.1° | 118.7° |
| C6 | N1 | C2 | O2 | 179.9° | 179.7° |
| N1 | C6 | C5 | H1 | 180.0° | 179.3° |
| C6 | N1 | C2 | N3 | 0.3° | 0.0° |
| N1 | C6 | C5 | C4 | 0.0° | 0.7° |
| C6 | N1 | C1' | H9 | 169.6° | 4.2° |
| N1 | C6 | C5 | H11 | 180.0° | 179.3° |
| N1 | C2 | O2 | N3 | 179.8° | 179.8° |
| C2 | N1 | C6 | C5 | 0.2° | 0.5° |
| N1 | C2 | N3 | C4 | 0.2° | 0.2° |
| C2 | N1 | C6 | H1 | 179.8° | 179.8° |
| C2 | N1 | C1' | H9 | 10.6° | 175.8° |
| N1 | C2 | N3 | H10 | 179.8° | 179.8° |
| O2 | C2 | N3 | C4 | 180.0° | 180.0° |
| O2 | C2 | N3 | H10 | 0.0° | 0.0° |
| C6 | C5 | C4 | H11 | 180.0° | 180.0° |
| C6 | C5 | C4 | N3 | 0.1° | 0.5° |
| C6 | C5 | C4 | O4 | 179.8° | 179.5° |
| F2' | C2' | C3' | H3 | 88.2° | 122.6° |
| F2' | C2' | C1' | H9 | 29.5° | 23.7° |
| C2 | N3 | C4 | C5 | 0.0° | 0.0° |
| C2 | N3 | C4 | H10 | 180.0° | 180.0° |
| C2 | N3 | C4 | O4 | 179.9° | 179.9° |
| C5 | C4 | N3 | O4 | 179.9° | 180.0° |
| C4 | C5 | C6 | H1 | 179.9° | 180.0° |
| C5 | C4 | N3 | H10 | 180.0° | 180.0° |
| N3 | C4 | C5 | H11 | 179.9° | 179.5° |
| O4 | C4 | N3 | H10 | 0.1° | 0.1° |
| O4 | C4 | C5 | H11 | 0.1° | 0.5° |
| H1 | C6 | C5 | H11 | 0.1° | 0.0° |
| H3 | C3' | C4' | H4 | 100.5° | 146.5° |
| H3 | C3' | C2' | H8 | 35.3° | 0.1° |
| H4 | C4' | C5' | H5 | 74.4° | 64.1° |
| H4 | C4' | C5' | H6 | 45.5° | 175.9° |
| H5 | C5' | O5' | H7 | 60.0° | 60.1° |
| H6 | C5' | O5' | H7 | 59.9° | 60.0° |
| H8 | C2' | C1' | H9 | 153.6° | 146.4° |
