Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

02D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.36Å1.40ÅAromatic
C1S5sing1.76Å1.70ÅAromatic
C1C6sing1.47Å1.48Å
C2C3sing1.38Å1.41ÅAromatic
C2H2sing1.08Å1.08Å
C3C4doub1.34Å1.41ÅAromatic
C3H3sing1.08Å1.08Å
C4S5sing1.71Å1.70ÅAromatic
C4C9sing1.51Å1.34Å
C6N7doub1.31Å1.34Å
C6N8sing1.38Å1.34Å
N7HN7sing0.97Å1.00Å
N8HN81sing0.97Å1.00Å
N8HN82sing0.97Å1.00Å
C9N10sing1.47Å1.42Å
C9H91sing1.09Å1.10Å
C9H92sing1.09Å1.10Å
N10HN10sing1.01Å1.00Å
N10H1sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1S5111.5°109.1°
C2C1C6124.8°125.5°
C1C2C3112.1°113.4°
C1C2H2124.0°123.3°
S5C1C6123.7°125.5°
C1S5C493.1°91.6°
C1C6N7120.3°120.1°
C1C6N8119.9°120.0°
C3C2H2123.9°123.3°
C2C3C4112.0°115.1°
C2C3H3124.0°122.5°
C4C3H3124.0°122.4°
C3C4S5111.3°110.9°
C3C4C9124.6°124.6°
S5C4C9124.1°124.5°
C4C9N10110.4°109.4°
C4C9H91109.2°109.5°
C4C9H92109.1°109.5°
N7C6N8119.8°119.9°
C6N7HN7112.0°120.1°
C6N8HN81120.0°120.0°
C6N8HN82120.0°120.0°
HN81N8HN82120.0°120.0°
N10C9H91109.2°109.5°
N10C9H92109.1°109.5°
C9N10HN10109.5°111.0°
C9N10H1109.5°111.0°
H91C9H92109.8°109.5°
HN10N10H1109.4°110.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1S5C6179.5°179.7°
C1C2C3H2180.0°179.9°
C1C2C3C40.0°0.0°
C1C2C3H3180.0°179.9°
C2C1S5C40.1°0.0°
C2C1C6N71.3°0.1°
C2C1C6N8179.1°180.0°
S5C1C2C30.1°0.0°
S5C1C2H2179.9°180.0°
C1S5C4C30.1°0.0°
C1S5C4C9179.0°180.0°
S5C1C6N7178.2°179.7°
S5C1C6N81.5°0.3°
C6C1C2C3179.4°179.7°
C6C1C2H20.5°0.3°
C6C1S5C4179.4°179.7°
C1C6N7N8179.6°180.0°
C1C6N7HN7179.6°180.0°
C1C6N8HN81179.6°0.0°
C1C6N8HN820.4°180.0°
C2C3C4H3180.0°179.9°
C2C3C4S50.1°0.0°
C2C3C4C9179.1°180.0°
H2C2C3C4180.0°180.0°
H2C2C3H30.0°0.0°
C3C4S5C9179.2°180.0°
C3C4C9N1083.2°90.0°
C3C4C9H9136.8°150.0°
C3C4C9H92156.9°30.0°
H3C3C4S5179.9°179.9°
H3C3C4C90.9°0.0°
S5C4C9N1097.8°90.0°
S5C4C9H91142.2°30.0°
S5C4C9H9222.2°150.0°
C4C9N10H91120.0°120.0°
C4C9N10H92120.0°120.0°
C4C9H91H92119.6°120.0°
C4C9N10HN10180.0°56.1°
C4C9N10H160.0°179.9°
N7C6N8HN810.0°180.0°
N7C6N8HN82180.0°0.0°
N8C6N7HN70.0°0.0°
C6N8HN81HN82180.0°180.0°
N10C9H91H92119.6°120.0°
C9N10HN10H1120.0°123.9°
H91C9N10HN1060.0°63.9°
H91C9N10H1179.9°59.9°
H92C9N10HN1060.0°176.0°
H92C9N10H159.9°60.1°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon