01C
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | HN3 | sing | 1.01Å | 1.00Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | H25 | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.51Å | 1.46Å | |
CB | H261 | sing | 1.09Å | 1.10Å | |
CB | H262 | sing | 1.09Å | 1.10Å | |
CG | CD1 | doub | 1.34Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.47Å | 1.42Å | Aromatic |
CD1 | NE1 | sing | 1.37Å | 1.35Å | Aromatic |
CD1 | H30 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | doub | 1.41Å | 1.38Å | Aromatic |
CD2 | CE3 | sing | 1.40Å | 1.43Å | Aromatic |
CE2 | NE1 | sing | 1.38Å | 1.40Å | Aromatic |
CE2 | CZ2 | sing | 1.39Å | 1.42Å | Aromatic |
NE1 | HN33 | sing | 0.97Å | 1.00Å | |
CZ2 | CH2 | doub | 1.38Å | 1.42Å | Aromatic |
CZ2 | H34 | sing | 1.08Å | 1.08Å | |
CH2 | CZ3 | sing | 1.39Å | 1.41Å | Aromatic |
CH2 | H35 | sing | 1.08Å | 1.08Å | |
CZ3 | CE3 | doub | 1.37Å | 1.41Å | Aromatic |
CZ3 | H36 | sing | 1.08Å | 1.08Å | |
CE3 | H37 | sing | 1.08Å | 1.08Å | |
C | O | doub | 1.21Å | 1.41Å | |
C | C1 | sing | 1.51Å | 1.57Å | |
C1 | F11 | sing | 1.40Å | 1.34Å | |
C1 | F12 | sing | 1.40Å | 1.32Å | |
C1 | C2 | sing | 1.53Å | 1.50Å | |
C2 | F21 | sing | 1.40Å | 1.30Å | |
C2 | F22 | sing | 1.40Å | 1.32Å | |
C2 | F23 | sing | 1.40Å | 1.29Å | |
N | H2 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | HN3 | 109.5° | 111.0° |
N | CA | CB | 107.4° | 109.4° |
N | CA | C | 110.1° | 109.4° |
N | CA | H25 | 110.6° | 109.5° |
CA | N | H2 | 109.5° | 111.0° |
HN3 | N | H2 | 109.5° | 111.0° |
CB | CA | C | 109.9° | 109.5° |
CB | CA | H25 | 110.8° | 109.5° |
CA | CB | CG | 109.1° | 109.5° |
CA | CB | H261 | 109.6° | 109.5° |
CA | CB | H262 | 109.6° | 109.4° |
C | CA | H25 | 108.1° | 109.5° |
CA | C | O | 103.1° | 120.1° |
CA | C | C1 | 109.2° | 120.0° |
CG | CB | H261 | 109.6° | 109.5° |
CG | CB | H262 | 109.6° | 109.5° |
CB | CG | CD1 | 125.5° | 126.6° |
CB | CG | CD2 | 124.8° | 126.5° |
H261 | CB | H262 | 109.3° | 109.5° |
CD1 | CG | CD2 | 108.6° | 106.9° |
CG | CD1 | NE1 | 106.8° | 110.0° |
CG | CD1 | H30 | 126.6° | 125.0° |
CG | CD2 | CE2 | 106.9° | 106.1° |
CG | CD2 | CE3 | 133.9° | 134.0° |
NE1 | CD1 | H30 | 126.6° | 125.1° |
CD1 | NE1 | CE2 | 110.9° | 109.9° |
CD1 | NE1 | HN33 | 124.5° | 125.1° |
CE2 | CD2 | CE3 | 119.2° | 119.9° |
CD2 | CE2 | NE1 | 106.7° | 107.1° |
CD2 | CE2 | CZ2 | 119.2° | 119.3° |
CD2 | CE3 | CZ3 | 122.7° | 119.7° |
CD2 | CE3 | H37 | 118.6° | 120.2° |
NE1 | CE2 | CZ2 | 134.1° | 133.5° |
CE2 | NE1 | HN33 | 124.5° | 125.0° |
CE2 | CZ2 | CH2 | 121.1° | 119.8° |
CE2 | CZ2 | H34 | 119.4° | 120.1° |
CH2 | CZ2 | H34 | 119.4° | 120.1° |
CZ2 | CH2 | CZ3 | 120.4° | 120.7° |
CZ2 | CH2 | H35 | 119.8° | 119.6° |
CZ3 | CH2 | H35 | 119.8° | 119.7° |
CH2 | CZ3 | CE3 | 117.3° | 120.6° |
CH2 | CZ3 | H36 | 121.4° | 119.7° |
CE3 | CZ3 | H36 | 121.3° | 119.7° |
CZ3 | CE3 | H37 | 118.6° | 120.1° |
O | C | C1 | 112.3° | 120.0° |
C | C1 | F11 | 110.2° | 109.5° |
C | C1 | F12 | 108.1° | 109.5° |
C | C1 | C2 | 116.2° | 109.5° |
F11 | C1 | F12 | 106.7° | 109.5° |
F11 | C1 | C2 | 110.9° | 109.5° |
F12 | C1 | C2 | 104.0° | 109.5° |
C1 | C2 | F21 | 105.0° | 109.5° |
C1 | C2 | F22 | 111.5° | 109.5° |
C1 | C2 | F23 | 108.1° | 109.5° |
F21 | C2 | F22 | 109.9° | 109.5° |
F21 | C2 | F23 | 110.7° | 109.4° |
F22 | C2 | F23 | 111.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | HN3 | H2 | 120.0° | 124.0° |
N | CA | CB | C | 119.8° | 119.9° |
N | CA | CB | H25 | 120.8° | 120.0° |
N | CA | C | H25 | 120.9° | 120.0° |
N | CA | CB | CG | 76.0° | 65.0° |
N | CA | CB | H261 | 44.0° | 55.0° |
N | CA | CB | H262 | 164.0° | 175.0° |
N | CA | C | O | 169.8° | 15.0° |
N | CA | C | C1 | 70.6° | 165.0° |
HN3 | N | CA | CB | 180.0° | 176.0° |
HN3 | N | CA | C | 60.3° | 64.0° |
HN3 | N | CA | H25 | 59.1° | 56.0° |
CB | CA | C | H25 | 121.0° | 120.1° |
CA | CB | CG | H261 | 120.0° | 120.0° |
CA | CB | CG | H262 | 120.0° | 119.9° |
CA | CB | H261 | H262 | 120.2° | 119.9° |
CA | CB | CG | CD1 | 35.5° | 95.0° |
CA | CB | CG | CD2 | 157.8° | 84.8° |
CB | CA | C | O | 51.7° | 105.0° |
CB | CA | C | C1 | 171.2° | 75.0° |
CB | CA | N | H2 | 60.0° | 60.0° |
C | CA | CB | CG | 164.2° | 175.0° |
C | CA | CB | H261 | 75.8° | 64.9° |
C | CA | CB | H262 | 44.2° | 55.1° |
CA | C | O | C1 | 117.4° | 180.0° |
CA | C | C1 | F11 | 49.5° | 65.0° |
CA | C | C1 | F12 | 66.7° | 175.0° |
CA | C | C1 | C2 | 176.8° | 55.0° |
C | CA | N | H2 | 59.7° | 59.9° |
H25 | CA | CB | CG | 44.8° | 55.0° |
H25 | CA | CB | H261 | 164.8° | 175.0° |
H25 | CA | CB | H262 | 75.2° | 65.0° |
H25 | CA | C | O | 69.3° | 135.0° |
H25 | CA | C | C1 | 50.3° | 45.0° |
H25 | CA | N | H2 | 179.1° | 179.9° |
CG | CB | H261 | H262 | 120.1° | 120.0° |
CB | CG | CD1 | CD2 | 168.5° | 179.8° |
CB | CG | CD1 | NE1 | 166.4° | 180.0° |
CB | CG | CD1 | H30 | 13.6° | 0.0° |
CB | CG | CD2 | CE2 | 165.7° | 180.0° |
CB | CG | CD2 | CE3 | 14.9° | 0.1° |
H261 | CB | CG | CD1 | 155.5° | 145.0° |
H261 | CB | CG | CD2 | 37.8° | 35.2° |
H262 | CB | CG | CD1 | 84.5° | 24.9° |
H262 | CB | CG | CD2 | 82.1° | 155.3° |
CG | CD1 | NE1 | H30 | 180.0° | 179.9° |
CD1 | CG | CD2 | CE2 | 2.9° | 0.2° |
CD1 | CG | CD2 | CE3 | 176.5° | 179.7° |
CG | CD1 | NE1 | CE2 | 0.5° | 0.2° |
CG | CD1 | NE1 | HN33 | 179.5° | 180.0° |
CD2 | CG | CD1 | NE1 | 2.1° | 0.2° |
CD2 | CG | CD1 | H30 | 177.9° | 179.8° |
CG | CD2 | CE2 | CE3 | 179.4° | 180.0° |
CG | CD2 | CE2 | NE1 | 2.5° | 0.1° |
CG | CD2 | CE2 | CZ2 | 178.2° | 180.0° |
CG | CD2 | CE3 | CZ3 | 179.3° | 179.9° |
CG | CD2 | CE3 | H37 | 0.7° | 0.0° |
CD1 | NE1 | CE2 | CD2 | 1.3° | 0.0° |
CD1 | NE1 | CE2 | HN33 | 180.0° | 179.8° |
CD1 | NE1 | CE2 | CZ2 | 179.6° | 179.8° |
H30 | CD1 | NE1 | CE2 | 179.5° | 179.9° |
H30 | CD1 | NE1 | HN33 | 0.5° | 0.1° |
CD2 | CE2 | NE1 | CZ2 | 179.1° | 179.9° |
CD2 | CE2 | NE1 | HN33 | 178.7° | 179.9° |
CD2 | CE2 | CZ2 | CH2 | 1.4° | 0.0° |
CD2 | CE2 | CZ2 | H34 | 178.6° | 179.9° |
CE2 | CD2 | CE3 | CZ3 | 1.4° | 0.0° |
CE2 | CD2 | CE3 | H37 | 178.5° | 180.0° |
CE3 | CD2 | CE2 | NE1 | 177.0° | 179.9° |
CE3 | CD2 | CE2 | CZ2 | 2.3° | 0.0° |
CD2 | CE3 | CZ3 | CH2 | 0.5° | 0.1° |
CD2 | CE3 | CZ3 | H37 | 180.0° | 180.0° |
CD2 | CE3 | CZ3 | H36 | 179.5° | 180.0° |
NE1 | CE2 | CZ2 | CH2 | 177.7° | 179.8° |
NE1 | CE2 | CZ2 | H34 | 2.3° | 0.2° |
CZ2 | CE2 | NE1 | HN33 | 0.4° | 0.0° |
CE2 | CZ2 | CH2 | H34 | 180.0° | 180.0° |
CE2 | CZ2 | CH2 | CZ3 | 0.5° | 0.0° |
CE2 | CZ2 | CH2 | H35 | 179.5° | 180.0° |
CZ2 | CH2 | CZ3 | H35 | 180.0° | 180.0° |
CZ2 | CH2 | CZ3 | CE3 | 1.4° | 0.1° |
CZ2 | CH2 | CZ3 | H36 | 178.6° | 180.0° |
H34 | CZ2 | CH2 | CZ3 | 179.4° | 180.0° |
H34 | CZ2 | CH2 | H35 | 0.6° | 0.0° |
CH2 | CZ3 | CE3 | H36 | 180.0° | 179.9° |
CH2 | CZ3 | CE3 | H37 | 179.5° | 180.0° |
H35 | CH2 | CZ3 | CE3 | 178.6° | 179.9° |
H35 | CH2 | CZ3 | H36 | 1.4° | 0.0° |
H36 | CZ3 | CE3 | H37 | 0.5° | 0.0° |
O | C | C1 | F11 | 64.2° | 115.0° |
O | C | C1 | F12 | 179.6° | 5.0° |
O | C | C1 | C2 | 63.1° | 125.0° |
C | C1 | F11 | F12 | 117.1° | 120.0° |
C | C1 | F11 | C2 | 130.2° | 120.0° |
C | C1 | F12 | C2 | 124.1° | 120.0° |
C | C1 | C2 | F21 | 175.8° | 60.0° |
C | C1 | C2 | F22 | 65.3° | 180.0° |
C | C1 | C2 | F23 | 57.6° | 60.0° |
F11 | C1 | F12 | C2 | 117.4° | 120.0° |
F11 | C1 | C2 | F21 | 48.9° | 60.0° |
F11 | C1 | C2 | F22 | 167.8° | 60.0° |
F11 | C1 | C2 | F23 | 69.3° | 180.0° |
F12 | C1 | C2 | F21 | 65.5° | 180.0° |
F12 | C1 | C2 | F22 | 53.4° | 60.0° |
F12 | C1 | C2 | F23 | 176.3° | 60.0° |
C1 | C2 | F21 | F22 | 120.0° | 120.1° |
C1 | C2 | F21 | F23 | 116.4° | 120.0° |
C1 | C2 | F22 | F23 | 120.9° | 120.0° |
F21 | C2 | F22 | F23 | 123.2° | 119.9° |