Author results

6HUX
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HMDII FROM METHANOCALDOCOCCUS JANNASCHII RECONSTITUED WITH FE-GUANYLYLPYRIDINOL (FEGP) COFACTOR AND CO-CRYSTALLIZED WITH METHENYL-TETRAHYDROMETHANOPTERIN AT 2.5 A RESOLUTION
Descriptor:H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ1338, ACETATE ION, iron-guanylyl pyridinol cofactor, ...
Authors:Watanabe, T., Wagner, T., Huang, G., Kahnt, J., Ataka, K., Ermler, U., Shima, S.
Deposit date:2018-10-09
Release date:2019-01-09
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Bacterial [Fe]-Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates.
Angew. Chem. Int. Ed. Engl., 58, 2019
6HUY
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HMDII FROM DESULFUROBACTERIUM THERMOLITHOTROPHUM RECONSTITUED WITH FE-GUANYLYLPYRIDINOL (FEGP) COFACTOR AND CO-CRYSTALLIZED WITH METHENYL-TETRAHYDROFOLATE FORM A
Descriptor:Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein, iron-guanylyl pyridinol cofactor, GLYCEROL, ...
Authors:Watanabe, T., Wagner, T., Huang, G., Kahnt, J., Ataka, K., Ermler, U., Shima, S.
Deposit date:2018-10-09
Release date:2019-01-09
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Bacterial [Fe]-Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates.
Angew. Chem. Int. Ed. Engl., 58, 2019
6HUZ
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HMDII FROM DESULFUROBACTERIUM THERMOLITHOTROPHUM RECONSTITUTED WITH FE-GUANYLYLPYRIDINOL (FEGP) COFACTOR AND CO-CRYSTALLIZED WITH METHENYL-TETRAHYDROFOLATE FORM B
Descriptor:Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein, iron-guanylyl pyridinol cofactor, 5,10-Methenyltetrahydrofolate, ...
Authors:Watanabe, T., Wagner, T., Huang, G., Kahnt, J., Ataka, K., Ermler, U., Shima, S.
Deposit date:2018-10-09
Release date:2019-01-09
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Bacterial [Fe]-Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates.
Angew. Chem. Int. Ed. Engl., 58, 2019
1ITX
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CATALYTIC DOMAIN OF CHITINASE A1 FROM BACILLUS CIRCULANS WL-12
Descriptor:Glycosyl Hydrolase, GLYCEROL
Authors:Iwahori, F., Matsumoto, T., Watanabe, T., Nonaka, T.
Deposit date:2002-02-13
Release date:2002-03-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Three-dimensional structure of the catalytic domain of chitinase A1 from Bacillus circulans WL-12 at a very high resolution
PROC.JPN.ACAD.,SER.B, 75, 1999
1WVU
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CRYSTAL STRUCTURE OF CHITINASE C FROM STREPTOMYCES GRISEUS HUT6037
Descriptor:chitinase C, CHLORIDE ION
Authors:Kezuka, Y., Watanabe, T., Nonaka, T.
Deposit date:2004-12-27
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Studies of a Two-domain Chitinase from Streptomyces griseus HUT6037
J.Mol.Biol., 358, 2006
1WVV
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CRYSTAL STRUCTURE OF CHITINASE C MUTANT E147Q
Descriptor:chitinase C, CHLORIDE ION, GLYCEROL
Authors:Kezuka, Y., Watanabe, T., Nonaka, T.
Deposit date:2004-12-27
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies of a Two-domain Chitinase from Streptomyces griseus HUT6037
J.Mol.Biol., 358, 2006
2DBT
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CRYSTAL STRUCTURE OF CHITINASE C FROM STREPTOMYCES GRISEUS HUT6037
Descriptor:chitinase C, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
Authors:Kezuka, Y., Watanabe, T., Nonaka, T.
Deposit date:2005-12-16
Release date:2006-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structural Studies of a Two-domain Chitinase from Streptomyces griseus HUT6037
J.Mol.Biol., 358, 2006
2D49
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SOLUTION STRUCTURE OF THE CHITIN-BINDING DOMAIN OF STREPTOMYCES GRISEUS CHITINASE C
Descriptor:chitinase C
Authors:Akagi, K., Watanabe, J., Hara, M., Kezuka, Y., Chikaishi, E., Yamaguchi, T., Akutsu, H., Nonaka, T., Watanabe, T., Ikegami, T.
Deposit date:2005-10-11
Release date:2006-10-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Identification of the substrate interaction region of the chitin-binding domain of Streptomyces griseus chitinase C
J.Biochem.(Tokyo), 139, 2006
3IWR
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CRYSTAL STRUCTURE OF CLASS I CHITINASE FROM ORYZA SATIVA L. JAPONICA
Descriptor:Chitinase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Kezuka, Y., Watanabe, T., Nonaka, T.
Deposit date:2009-09-03
Release date:2010-04-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering.
Proteins, 78, 2010
2DKV
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CRYSTAL STRUCTURE OF CLASS I CHITINASE FROM ORYZA SATIVA L. JAPONICA
Descriptor:chitinase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Kezuka, Y., Nishizawa, Y., Watanabe, T., Nonaka, T.
Deposit date:2006-04-14
Release date:2007-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering
Proteins, 2010
2E4M
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CRYSTAL STRUCTURE OF HEMAGGLUTININ SUBCOMPONENT COMPLEX (HA-33/HA-17) FROM CLOSTRIDIUM BOTULINUM SEROTYPE D STRAIN 4947
Descriptor:Main hemagglutinin component, HA-17
Authors:Hasegawa, K., Watanabe, T., Suzuki, T., Yamano, A., Niwa, K., Ohyama, T.
Deposit date:2006-12-13
Release date:2007-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Novel Subunit Structure of Clostridium botulinum Serotype D Toxin Complex with Three Extended Arms
J.Biol.Chem., 282, 2007
1ED7
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SOLUTION STRUCTURE OF THE CHITIN-BINDING DOMAIN OF BACILLUS CIRCULANS WL-12 CHITINASE A1
Descriptor:CHITINASE A1
Authors:Ikegami, T., Okada, T., Hashimoto, M., Seino, S., Watanabe, T., Shirakawa, M.
Deposit date:2000-01-27
Release date:2000-05-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the chitin-binding domain of Bacillus circulans WL-12 chitinase A1.
J.Biol.Chem., 275, 2000
1K85
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SOLUTION STRUCTURE OF THE FIBRONECTIN TYPE III DOMAIN FROM BACILLUS CIRCULANS WL-12 CHITINASE A1.
Descriptor:CHITINASE A1
Authors:Jee, J.G., Ikegami, T., Hashimoto, M., Kawabata, T., Ikeguchi, M., Watanabe, T., Shirakawa, M.
Deposit date:2001-10-23
Release date:2002-12-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the Fibronectin Type III Domain from Bacillus circulans WL-12 Chitinase A1
J.Biol.Chem., 277, 2002
2RTT
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SOLUTION STRUCTURE OF THE CHITIN-BINDING DOMAIN OF CHI18AC FROM STREPTOMYCES COELICOLOR
Descriptor:ChiC
Authors:Okumura, A., Uemura, M., Yamada, N., Chikaishi, E., Takai, T., Yoshio, S., Akagi, K., Morita, J., Lee, Y., Yokogawa, D., Suzuki, K., Watanabe, T., Ikegami, T.
Deposit date:2013-08-26
Release date:2014-08-27
Method:SOLUTION NMR
Cite:Solution structure of the Chitin-binding domain of chitinase Chi18aC from Streptomyces coelicolor
To be Published
3A8N
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CRYSTAL STRUCTURE OF THE TIAM1 PHCCEX DOMAIN
Descriptor:T-lymphoma invasion and metastasis-inducing protein 1
Authors:Terawaki, S., Kitano, K., Mori, T., Zhai, Y., Higuchi, Y., Itoh, N., Watanabe, T., Kaibuchi, K., Hakoshima, T.
Deposit date:2009-10-07
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module
Embo J., 29, 2010
3A8P
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CRYSTAL STRUCTURE OF THE TIAM2 PHCCEX DOMAIN
Descriptor:T-lymphoma invasion and metastasis-inducing protein 2
Authors:Terawaki, S., Kitano, K., Mori, T., Zhai, Y., Higuchi, Y., Itoh, N., Watanabe, T., Kaibuchi, K., Hakoshima, T.
Deposit date:2009-10-07
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module
Embo J., 29, 2010
3A8Q
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LOW-RESOLUTION CRYSTAL STRUCTURE OF THE TIAM2 PHCCEX DOMAIN
Descriptor:T-lymphoma invasion and metastasis-inducing protein 2
Authors:Terawaki, S., Kitano, K., Mori, T., Zhai, Y., Higuchi, Y., Itoh, N., Watanabe, T., Kaibuchi, K., Hakoshima, T.
Deposit date:2009-10-07
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module
Embo J., 29, 2010
3VUO
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CRYSTAL STRUCTURE OF NONTOXIC NONHEMAGGLUTININ SUBCOMPONENT (NTNHA) FROM CLOSTRIDIUM BOTULINUM SEROTYPE D STRAIN 4947
Descriptor:NTNHA
Authors:Sagane, Y., Miyashita, S.-I., Miyata, K., Matsumoto, T., Inui, K., Hayashi, S., Suzuki, T., Hasegawa, K., Yajima, S., Yamano, A., Niwa, K., Watanabe, T.
Deposit date:2012-07-03
Release date:2012-09-19
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Small-angle X-ray scattering reveals structural dynamics of the botulinum neurotoxin associating protein, nontoxic nonhemagglutinin
Biochem.Biophys.Res.Commun., 425, 2012
3WD0
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SERRATIA MARCESCENS CHITINASE B, TETRAGONAL FORM
Descriptor:Chitinase B, GLYCEROL, SULFATE ION, ...
Authors:Hirose, T., Maita, N., Gouda, H., Koseki, J., Yamamoto, T., Sugawara, A., Nakano, H., Hirono, S., Shiomi, K., Watanabe, T., Taniguchi, H., Sharpless, K.B., Omura, S., Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD1
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SERRATIA MARCESCENS CHITINASE B COMPLEXED WITH SYN-TRIAZOLE INHIBITOR
Descriptor:Chitinase B, GLYCEROL, SULFATE ION, ...
Authors:Hirose, T., Maita, N., Gouda, H., Koseki, J., Yamamoto, T., Sugawara, A., Nakano, H., Hirono, S., Shiomi, K., Watanabe, T., Taniguchi, H., Sharpless, K.B., Omura, S., Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD2
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SERRATIA MARCESCENS CHITINASE B COMPLEXED WITH AZIDE INHIBITOR
Descriptor:Chitinase B, [2-[[(2S)-1-[bis(phenylmethyl)amino]-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-diazonio-azanide, GLYCEROL, ...
Authors:Hirose, T., Maita, N., Gouda, H., Koseki, J., Yamamoto, T., Sugawara, A., Nakano, H., Hirono, S., Shiomi, K., Watanabe, T., Taniguchi, H., Sharpless, K.B., Omura, S., Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD3
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SERRATIA MARCESCENS CHITINASE B COMPLEXED WITH AZIDE INHIBITOR
Descriptor:Chitinase B, [2-[[(2S)-1-[bis(phenylmethyl)amino]-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-diazonio-azanide, GLYCEROL, ...
Authors:Hirose, T., Maita, N., Gouda, H., Koseki, J., Yamamoto, T., Sugawara, A., Nakano, H., Hirono, S., Shiomi, K., Watanabe, T., Taniguchi, H., Sharpless, K.B., Omura, S., Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD4
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SERRATIA MARCESCENS CHITINASE B COMPLEXED WITH AZIDE INHIBITOR AND QUINOLINE COMPOUND
Descriptor:Chitinase B, GLYCEROL, SULFATE ION, ...
Authors:Hirose, T., Maita, N., Gouda, H., Koseki, J., Yamamoto, T., Sugawara, A., Nakano, H., Hirono, S., Shiomi, K., Watanabe, T., Taniguchi, H., Sharpless, K.B., Omura, S., Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
5B2H
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CRYSTAL STRUCTURE OF HA33 FROM CLOSTRIDIUM BOTULINUM SEROTYPE C STRAIN YOICHI
Descriptor:HA-33, TRIETHYLENE GLYCOL
Authors:Akiyama, T., Hayashi, S., Matsumoto, T., Hasegawa, K., Yamano, A., Suzuki, T., Niwa, K., Watanabe, T., Sagane, Y., Yajima, S.
Deposit date:2016-01-15
Release date:2016-06-15
Last modified:2016-07-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational divergence in the HA-33/HA-17 trimer of serotype C and D botulinum toxin complex
Biochem.Biophys.Res.Commun., 476, 2016
1F2E
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STRUCTURE OF SPHINGOMONAD, GLUTATHIONE S-TRANSFERASE COMPLEXED WITH GLUTATHIONE
Descriptor:GLUTATHIONE S-TRANSFERASE, GLUTATHIONE
Authors:Nishio, T., Watanabe, T., Patel, A., Wang, Y., Lau, P.C.K., Grochulski, P., Li, Y., Cygler, M.
Deposit date:2000-05-24
Release date:2000-06-21
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Properties of a Sphingomonad and Marine Bacterium Beta-Class Glutathione S-Transferases and Crystal Structure of the Former Complex with Glutathione
To be published