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3ZHU
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BU of 3zhu by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD, second post-decarboxylation intermediate from 2-oxoadipate
Descriptor: (5R)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZHV
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BU of 3zhv by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD, post-decarboxylation intermediate from pyruvate (2-hydroxyethyl-ThDP)
Descriptor: 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-[(1S)-1-oxidanylethyl]-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZHR
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BU of 3zhr by Molmil
Crystal structure of the H747A mutant of the SucA domain of Mycobacterium smegmatis KGD showing the active site lid closed
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZHQ
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BU of 3zhq by Molmil
Crystal structure of the H747A mutant of the SucA domain of Mycobacterium smegmatis KGD
Descriptor: CALCIUM ION, MAGNESIUM ION, MULTIFUNCTIONAL 2-OXOGLUTARATE METABOLISM ENZYME, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZHS
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BU of 3zhs by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD, first post-decarboxylation intermediate from alpha-ketoglutarate
Descriptor: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZHT
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BU of 3zht by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD, first post-decarboxylation intermediate from 2-oxoadipate
Descriptor: (5S)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
4X3F
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BU of 4x3f by Molmil
Crystal structure of the intracellular domain of the M. tuberculosis Ser/Thr kinase PknA
Descriptor: Serine/threonine-protein kinase PknA
Authors:Wagner, T, Wehenkel, A, Alzari, P.M, Bellinzoni, M.
Deposit date:2014-11-28
Release date:2015-01-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of the catalytic domain of the ser/thr kinase PknA from M. tuberculosis shows an Src-like autoinhibited conformation.
Proteins, 83, 2015
5T61
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BU of 5t61 by Molmil
TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, TRICLINIC FORM AT 2.55 A
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CHLORIDE ION, HYDROSULFURIC ACID, ...
Authors:Wagner, T, Ermler, U, Shima, S.
Deposit date:2016-09-01
Release date:2016-10-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
Science, 354, 2016
5T5I
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BU of 5t5i by Molmil
TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, ORTHORHOMBIC FORM AT 1.9 A
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CALCIUM ION, GLYCEROL, ...
Authors:Wagner, T, Ermler, U, Shima, S.
Deposit date:2016-08-31
Release date:2016-10-19
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
Science, 354, 2016
5T5M
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BU of 5t5m by Molmil
TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, TRIGONAL FORM AT 2.5 A.
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ...
Authors:Wagner, T, Ermler, U, Shima, S.
Deposit date:2016-08-31
Release date:2016-10-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
Science, 354, 2016
1GG0
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BU of 1gg0 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF KDOP SYNTHASE AT 3.0 A
Descriptor: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE, PHOSPHATE ION
Authors:Wagner, T, Kretsinger, R.H, Bauerle, R, Tolbert, W.D.
Deposit date:2000-08-04
Release date:2000-10-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:3-Deoxy-D-manno-octulosonate-8-phosphate synthase from Escherichia coli. Model of binding of phosphoenolpyruvate and D-arabinose-5-phosphate.
J.Mol.Biol., 301, 2000
5A8K
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BU of 5a8k by Molmil
METHYL-COENZYME M REDUCTASE FROM METHANOTHERMOBACTER WOLFEII AT 1.4 A RESOLUTION
Descriptor: 1-THIOETHANESULFONIC ACID, 2-ETHOXYETHANOL, CALCIUM ION, ...
Authors:Wagner, T, Ermler, U.
Deposit date:2015-07-16
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Angew.Chem.Int.Ed.Engl., 55, 2016
5A0Y
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BU of 5a0y by Molmil
METHYL-COENZYME M REDUCTASE FROM METHANOTHERMOBACTER MARBURGENSIS AT 1.1 A RESOLUTION
Descriptor: 1-THIOETHANESULFONIC ACID, CHLORIDE ION, Coenzyme B, ...
Authors:Wagner, T, Ermler, U.
Deposit date:2015-04-24
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Angew.Chem.Int.Ed.Engl., 55, 2016
5A8W
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BU of 5a8w by Molmil
METHYL-COENZYME M REDUCTASE II FROM METHANOTHERMOBACTER WOLFEII AT 1. 8 A RESOLUTION
Descriptor: 1-THIOETHANESULFONIC ACID, ACETATE ION, Coenzyme B, ...
Authors:Wagner, T, Ermler, U.
Deposit date:2015-07-17
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Angew.Chem.Int.Ed.Engl., 55, 2016
1GG1
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BU of 1gg1 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF DAHP SYNTHASE IN COMPLEX WITH MN2+ AND 2-PHOSPHOGLYCOLATE
Descriptor: 2-PHOSPHOGLYCOLIC ACID, 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE, MANGANESE (II) ION, ...
Authors:Wagner, T, Shumilin, I.A, Bauerle, R, Kretsinger, R.H.
Deposit date:2000-08-04
Release date:2000-10-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli: comparison of the Mn(2+)*2-phosphoglycolate and the Pb(2+)*2-phosphoenolpyruvate complexes and implications for catalysis.
J.Mol.Biol., 301, 2000
5A8R
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BU of 5a8r by Molmil
METHYL-COENZYME M REDUCTASE II FROM METHANOTHERMOBACTER MARBURGENSIS AT 2.15 A RESOLUTION
Descriptor: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ...
Authors:Wagner, T, Ermler, U.
Deposit date:2015-07-16
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Angew.Chem.Int.Ed.Engl., 55, 2016
2Y0P
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BU of 2y0p by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis alpha- ketoglutarate decarboxylase in complex with the enamine-ThDP intermediate and acetyl-CoA
Descriptor: (4E)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-2(3H)-ylidene}-4-hydroxybutanoic acid, 2-OXOGLUTARATE DECARBOXYLASE, ACETYL COENZYME *A, ...
Authors:Wagner, T, Bellinzoni, M, Wehenkel, A.M, O'Hare, H.M, Alzari, P.M.
Deposit date:2010-12-07
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional Plasticity and Allosteric Regulation of Alpha-Ketoglutarate Decarboxylase in Central Mycobacterial Metabolism.
Chem.Biol., 18, 2011
2XT6
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BU of 2xt6 by Molmil
Crystal structure of Mycobacterium smegmatis alpha-ketoglutarate decarboxylase homodimer (orthorhombic form)
Descriptor: 2-OXOGLUTARATE DECARBOXYLASE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Bellinzoni, M, Wehenkel, A.M, O'Hare, H.M, Alzari, P.M.
Deposit date:2010-10-05
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Functional Plasticity and Allosteric Regulation of Alpha-Ketoglutarate Decarboxylase in Central Mycobacterial Metabolism.
Chem.Biol., 18, 2011
2XTA
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BU of 2xta by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis alpha- ketoglutarate decarboxylase in complex with acetyl-CoA (triclinic form)
Descriptor: 2-OXOGLUTARATE DECARBOXYLASE, ACETYL COENZYME *A, CALCIUM ION, ...
Authors:Wagner, T, Bellinzoni, M, Wehenkel, A.M, O'Hare, H.M, Alzari, P.M.
Deposit date:2010-10-05
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional Plasticity and Allosteric Regulation of Alpha-Ketoglutarate Decarboxylase in Central Mycobacterial Metabolism.
Chem.Biol., 18, 2011
2YID
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BU of 2yid by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis alpha- ketoglutarate decarboxylase in complex with the enamine-ThDP intermediate
Descriptor: (4E)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-2(3H)-ylidene}-4-hydroxybutanoic acid, 2-OXOGLUTARATE DECARBOXYLASE, CALCIUM ION, ...
Authors:Wagner, T, Bellinzoni, M, Wehenkel, A.M, O'Hare, H.M, Alzari, P.M.
Deposit date:2011-05-11
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Functional Plasticity and Allosteric Regulation of Alpha-Ketoglutarate Decarboxylase in Central Mycobacterial Metabolism.
Chem.Biol., 18, 2011
2YIC
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BU of 2yic by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis alpha- ketoglutarate decarboxylase (triclinic form)
Descriptor: 2-OXOGLUTARATE DECARBOXYLASE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Bellinzoni, M, Wehenkel, A.M, O'Hare, H.M, Alzari, P.M.
Deposit date:2011-05-11
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Functional Plasticity and Allosteric Regulation of Alpha-Ketoglutarate Decarboxylase in Central Mycobacterial Metabolism.
Chem.Biol., 18, 2011
5L8X
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BU of 5l8x by Molmil
X-RAY STRUCTURE OF APO METHANOCALDOCOCCUS JANNASCHII METHYLTRANSFERASE SUBUNIT A AT 1.85 ANGSTROM
Descriptor: (2S)-2-hydroxybutanedioic acid, D-MALATE, Tetrahydromethanopterin S-methyltransferase subunit A
Authors:Wagner, T, Ermler, U, Shima, S.
Deposit date:2016-06-08
Release date:2016-06-22
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode.
Sci Rep, 6, 2016
5LAA
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BU of 5laa by Molmil
X-RAY STRUCTURE OF THE METHYLTRANSFERASE SUBUNIT A FROM METHANOTHERMUS FERVIDUS IN COMPLEX WITH COBALAMIN
Descriptor: COBALAMIN, Tetrahydromethanopterin S-methyltransferase subunit A
Authors:Wagner, T, Ermler, U, Shima, S.
Deposit date:2016-06-14
Release date:2016-07-06
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode.
Sci Rep, 6, 2016
5N1Q
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BU of 5n1q by Molmil
METHYL-COENZYME M REDUCTASE III FROM METHANOTHERMOCOCCUS THERMOLITHOTROPHICUS AT 1.9 A RESOLUTION
Descriptor: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ...
Authors:Wagner, T, Wegner, C.E, Ermler, U, Shima, S.
Deposit date:2017-02-06
Release date:2017-06-14
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales.
J.Bacteriol., 199, 2017
5N2A
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BU of 5n2a by Molmil
METHYL-COENZYME M REDUCTASE III FROM METHANOTORRIS FORMICICUS TRIGONAL FORM
Descriptor: 1-THIOETHANESULFONIC ACID, BROMIDE ION, Coenzyme B, ...
Authors:Wagner, T, Wegner, C.E, Ermler, U, Shima, S.
Deposit date:2017-02-07
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales.
J.Bacteriol., 199, 2017

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