Author results

1M8V
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STRUCTURE OF PYROCOCCUS ABYSSII SM PROTEIN IN COMPLEX WITH A URIDINE HEPTAMER
Descriptor:5'-R(P*UP*UP*UP*UP*UP*UP*U)-3', PUTATIVE SNRNP SM-LIKE PROTEIN, CALCIUM ION, ...
Authors:Thore, S., Mayer, C., Sauter, C., Weeks, S., Suck, D.
Deposit date:2002-07-26
Release date:2003-02-11
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Pyrococcus abyssii Sm core and its Complex with RNA: Common Features of RNA-binding in Archaea and Eukarya
J.Biol.Chem., 278, 2003
1UOC
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X-RAY STRUCTURE OF THE RNASE DOMAIN OF THE YEAST POP2 PROTEIN
Descriptor:POP2, CALCIUM ION, XENON
Authors:Thore, S., Mauxion, F., Seraphin, B., Suck, D.
Deposit date:2003-09-16
Release date:2003-11-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray Structure and Activity of the Yeast Pop2 Protein: A Nuclease Subunit of the Mrna Deadenylase Complex
Embo Rep., 4, 2003
2CKY
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STRUCTURE OF THE ARABIDOPSIS THALIANA THIAMINE PYROPHOSPHATE RIBOSWITCH WITH ITS REGULATORY LIGAND
Descriptor:NUCLEIC ACID, MAGNESIUM ION, OSMIUM ION, ...
Authors:Thore, S., Leibundgut, M., Ban, N.
Deposit date:2006-04-24
Release date:2006-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Eukaryotic Thiamine Pyrophosphate Riboswitch with its Regulatory Ligand.
Science, 312, 2006
3D2G
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STRUCTURAL BASIS OF THIAMINE PYROPHOSPHATE ANALOGUES BINDING TO THE EUKARYOTIC RIBOSWITCH
Descriptor:TPP-specific riboswitch, MAGNESIUM ION, THIAMINE DIPHOSPHATE
Authors:Thore, S.
Deposit date:2008-05-08
Release date:2008-07-01
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
3D2V
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STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE
Descriptor:TPP-specific riboswitch, MAGNESIUM ION, 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-2-METHYLPYRIDINIUM
Authors:Thore, S., Frick, C., Ban, N.
Deposit date:2008-05-09
Release date:2008-07-01
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
3D2X
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STRUCTURE OF THE THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH BOUND TO OXYTHIAMINE PYROPHOSPHATE
Descriptor:TPP-specific riboswitch, MAGNESIUM ION, 3-[(4-hydroxy-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium
Authors:Thore, S., Frick, C., Ban, N.
Deposit date:2008-05-09
Release date:2008-07-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
5NLG
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RRP5 C-TERMINAL DOMAIN
Descriptor:rRNA biogenesis protein RRP5
Authors:Thore, S., Fribourg, S.
Deposit date:2017-04-04
Release date:2018-08-29
Last modified:2018-10-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and interaction analysis of the Rrp5 C-terminal region.
FEBS Open Bio, 8, 2018
2JJ6
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CRYSTAL STRUCTURE OF THE PUTATIVE CARBOHYDRATE RECOGNITION DOMAIN OF THE HUMAN GALECTIN-RELATED PROTEIN
Descriptor:GALECTIN-RELATED PROTEIN
Authors:Thore, S., Walti, M.A., Kunzler, M., Aebi, M.
Deposit date:2008-03-18
Release date:2008-05-06
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Putative Carbohydrate Recognition Domain of Human Galectin-Related Protein
Proteins: Struct., Funct., Bioinf., 72, 2008
5HZD
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RNA EDITING TUTASE 1 FROM TRYPANOSOMA BRUCEI
Descriptor:3' terminal uridylyl transferase, ZINC ION, SULFATE ION, ...
Authors:Thore, S., Rajappa, L.T.
Deposit date:2016-02-02
Release date:2016-10-26
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting.
Nucleic Acids Res., 44, 2016
5I49
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RNA EDITING TUTASE 1 FROM TRYPANOSOMA BRUCEI IN COMPLEX WITH UTP ANALOG UMPNPP
Descriptor:3' terminal uridylyl transferase, ZINC ION, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ...
Authors:Thore, S., Rajappa, L.T.
Deposit date:2016-02-11
Release date:2016-11-09
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting.
Nucleic Acids Res., 44, 2016
5IDO
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RNA EDITING TUTASE 1 FROM TRYPANOSOMA BRUCEI IN COMPLEX WITH UTP
Descriptor:3' terminal uridylyl transferase, URIDINE 5'-TRIPHOSPHATE, ZINC ION, ...
Authors:Thore, S., Rajappa, L.T.
Deposit date:2016-02-24
Release date:2016-10-26
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting.
Nucleic Acids Res., 44, 2016
4H65
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CRYSTAL STRUCTURE OF SEMET DERIVATIVE OF HMP SYNTHASE THI5 FROM S. CEREVISIAE
Descriptor:Pyrimidine precursor biosynthesis enzyme THI5
Authors:Coquille, S.C., Roux, C., Fitzpatrick, T., Thore, S.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE.
J.Biol.Chem., 287, 2012
4H67
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CRYSTAL STRUCTURE OF HMP SYNTHASE THI5 FROM S. CEREVISIAE
Descriptor:Pyrimidine precursor biosynthesis enzyme THI5, SULFATE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Coquille, S.C., Roux, C., Fitzpatrick, T., Thore, S.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE.
J.Biol.Chem., 287, 2012
4H6D
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CRYSTAL STRUCTURE OF PLP-SOAKED HMP SYNTHASE THI5 FROM S. CEREVISIAE
Descriptor:Pyrimidine precursor biosynthesis enzyme THI5, PYRIDOXAL-5'-PHOSPHATE
Authors:Coquille, S.C., Roux, C., Fitzpatrick, T., Thore, S.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE.
J.Biol.Chem., 287, 2012
4N7Q
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CRYSTAL STRUCTURE OF EUKARYOTIC THIC FROM A. THALIANA
Descriptor:Phosphomethylpyrimidine synthase, chloroplastic, HEXANE-1,6-DIOL, ...
Authors:Coquille, S.C., Roux, C., Mehta, A., Begley, T.P., Fitzpatrick, T.B., Thore, S.
Deposit date:2013-10-16
Release date:2013-11-13
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution crystal structure of the eukaryotic HMP-P synthase (THIC) from Arabidopsis thaliana.
J.Struct.Biol., 184, 2013
4PJQ
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CRYSTAL STRUCTURE OF DESIGNED CPPR-POLYG PROTEIN
Descriptor:Pentatricopeptide repeat protein
Authors:Coquille, S.C., Filipovska, A., Chia, T.S., Rajappa, L., Lingford, J.P., Razif, M.F.M., Thore, S., Rackham, O.
Deposit date:2014-05-12
Release date:2014-12-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.353 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4PJR
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CRYSTAL STRUCTURE OF DESIGNED CPPR-NRE PROTEIN
Descriptor:Pentatricopeptide repeat protein, MAGNESIUM ION
Authors:Coquille, S.C., Filipovska, A., Chia, T.S., Rajappa, L., Lingford, J.P., Razif, M.F.M., Thore, S., Rackham, O.
Deposit date:2014-05-12
Release date:2014-12-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4PJS
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CRYSTAL STRUCTURE OF DESIGNED (SEMET)-CPPR-NRE PROTEIN
Descriptor:Pentatricopeptide repeat protein, CALCIUM ION
Authors:Coquille, S.C., Filipovska, A., Chia, T.S., Rajappa, L., Lingford, J.P., Razif, M.F.M., Thore, S., Rackham, O.
Deposit date:2014-05-12
Release date:2014-12-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4WN4
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CRYSTAL STRUCTURE OF DESIGNED CPPR-POLYA PROTEIN
Descriptor:Pentatricopeptide repeat protein
Authors:Coquille, S.C., Filipovska, A., Chia, T.S., Rajappa, L., Lingford, J.P., Razif, M.F.M., Thore, S., Rackham, O.
Deposit date:2014-10-10
Release date:2014-12-24
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4WSL
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CRYSTAL STRUCTURE OF DESIGNED CPPR-POLYC PROTEIN
Descriptor:Pentatricopeptide repeat protein
Authors:Coquille, S.C., Filipovska, A., Chia, T.S., Rajappa, L., Lingford, J.P., Razif, M.F.M., Thore, S., Rackham, O.
Deposit date:2014-10-28
Release date:2014-12-24
Last modified:2018-12-12
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
6FTU
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STRUCTURE OF A QUADRUPLEX FORMING SEQUENCE FROM D. DISCOIDEUM
Descriptor:DNA (26-MER), POTASSIUM ION
Authors:Guedin, A., Linda, L., Armane, S., Lacroix, L., Mergny, J.L., Thore, S., Yatsunyk, L.A.
Deposit date:2018-02-23
Release date:2018-04-18
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Quadruplexes in 'Dicty': crystal structure of a four-quartet G-quadruplex formed by G-rich motif found in the Dictyostelium discoideum genome.
Nucleic Acids Res., 46, 2018
1I4K
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CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS AT 2.5A RESOLUTION
Descriptor:PUTATIVE SNRNP SM-LIKE PROTEIN, CITRIC ACID
Authors:Toro, I., Thore, S., Mayer, C., Basquin, J., Seraphin, B., Suck, D.
Deposit date:2001-02-22
Release date:2001-08-22
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex.
EMBO J., 20, 2001
1I5L
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CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA
Descriptor:5'-R(*UP*UP*U)-3', PUTATIVE SNRNP SM-LIKE PROTEIN AF-SM1, URIDINE
Authors:Toro, I., Thore, S., Mayer, C., Basquin, J., Seraphin, B., Suck, D.
Deposit date:2001-02-28
Release date:2001-08-28
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex.
EMBO J., 20, 2001
2R0F
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LIGAND FREE STRUCTURE OF FUNGAL LECTIN CGL3
Descriptor:CGL3 lectin
Authors:Waelti, M.A., Walser, P.J., Thore, S., Gruenler, A., Ban, N., Kuenzler, M., Aebi, M.
Deposit date:2007-08-19
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Chitotetraose Coordination by CGL3, a Novel Galectin-Related Protein from Coprinopsis cinerea
J.Mol.Biol., 379, 2008
2R0H
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FUNGAL LECTIN CGL3 IN COMPLEX WITH CHITOTRIOSE (CHITOTETRAOSE)
Descriptor:CGL3 lectin, TRIACETYLCHITOTRIOSE
Authors:Waelti, M.A., Walser, P.J., Thore, S., Gruenler, A., Ban, N., Kuenzler, M., Aebi, M.
Deposit date:2007-08-20
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Chitotetraose Coordination by CGL3, a Novel Galectin-Related Protein from Coprinopsis cinerea
J.Mol.Biol., 379, 2008
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