Author results

4EDI
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DISULFIDE BONDED EUTL FROM CLOSTRIDIUM PERFRINGENS
Descriptor:Ethanolamine utilization protein, SODIUM ION
Authors:Thompson, M.C., Cascio, D., Crowley, C.S., Kopstein, J.S., Yeates, T.O.
Deposit date:2012-03-27
Release date:2013-03-27
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4FDZ
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EUTL FROM CLOSTRIDIUM PERFRINGENS, CRYSTALLIZED UNDER REDUCING CONDITIONS
Descriptor:Ethanolamine utilization protein, SODIUM ION
Authors:Thompson, M.C., Cascio, D., Crowley, C.S., Kopstein, J.S., Yeates, T.O.
Deposit date:2012-05-29
Release date:2013-05-29
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4LIW
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CCMK1 CARBOXYSOME SHELL PROTEIN FROM SYNECHOCYSTIS PCC6803, L11K POINT MUTANT
Descriptor:Carbon dioxide-concentrating mechanism protein CcmK homolog 1, SULFATE ION
Authors:Thompson, M.C., Yeates, T.O.
Deposit date:2013-07-03
Release date:2014-01-08
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A challenging interpretation of a hexagonally layered protein structure.
Acta Crystallogr.,Sect.D, 70, 2014
4OLO
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LIGAND-FREE STRUCTURE OF THE GRPU MICROCOMPARTMENT SHELL PROTEIN FROM CLOSTRIDIALES BACTERIUM 1_7_47FAA
Descriptor:BMC domain protein
Authors:Thompson, M.C., Ahmed, H., McCarty, K.N., Sawaya, M.R., Yeates, T.O.
Deposit date:2014-01-24
Release date:2014-07-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of a unique fe-s cluster binding site in a glycyl-radical type microcompartment shell protein.
J.Mol.Biol., 426, 2014
4TLH
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MONOCLINIC CRYSTAL STRUCTURE OF EUTL FROM CLOSTRIDIUM PERFRINGENS
Descriptor:Ethanolamine utilization protein EutL, SODIUM ION, CHLORIDE ION
Authors:Thompson, M.C., Yeates, T.O.
Deposit date:2014-05-29
Release date:2015-06-10
Last modified:2018-05-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism
Acta Crystallogr.,Sect.D, 2018
4TM6
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CRYSTAL STRUCTURE OF EUTL FROM CLOSTRIDIUM PERFRINGENS AT 298K
Descriptor:Ethanolamine utilization protein EutL, SODIUM ION
Authors:Thompson, M.C., Cascio, D., Yeates, T.O.
Deposit date:2014-05-31
Release date:2015-03-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.9002 Å)
Cite:An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4TME
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CRYSTAL STRUCTURE OF EUTL FROM CLOSTRIDIUM PERFRINGENS BOUND TO ETHANOLAMINE
Descriptor:Ethanolamine utilization protein EutL, SODIUM ION, ETHANOLAMINE
Authors:Thompson, M.C., Yeates, T.O.
Deposit date:2014-06-01
Release date:2015-03-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4U6I
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CRYSTAL STRUCTURE OF THE EUTL MICROCOMPARTMENT SHELL PROTEIN FROM CLOSTRIDIUM PERFRINGENS BOUND TO VITAMIN B12
Descriptor:Ethanolamine utilization protein EutL, SODIUM ION, COBALAMIN
Authors:Thompson, M.C., Crowley, C.S., Kopstein, J.S., Yeates, T.O.
Deposit date:2014-07-29
Release date:2014-10-22
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a bacterial microcompartment shell protein bound to a cobalamin cofactor.
Acta Crystallogr.,Sect.F, 70, 2014
6ARC
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MONOCLINIC EUTL - STRUCTURE DETERMINED FROM MERGED "GROUP 1" DATA
Descriptor:Ethanolamine utilization protein, SODIUM ION, CHLORIDE ION
Authors:Thompson, M.C., Cascio, D., Yeates, T.O.
Deposit date:2017-08-22
Release date:2017-10-11
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.
Acta Crystallogr D Struct Biol, 74, 2018
6ARD
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MONOCLINIC EUTL - STRUCTURE DETERMINED FROM MERGED "GROUP 2" DATA
Descriptor:Ethanolamine utilization protein, SODIUM ION
Authors:Thompson, M.C., Cascio, D., Yeates, T.O.
Deposit date:2017-08-22
Release date:2017-10-11
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.
Acta Crystallogr D Struct Biol, 74, 2018
4OLP
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LIGAND-FREE STRUCTURE OF THE GRPU MICROCOMPARTMENT SHELL PROTEIN FROM PECTOBACTERIUM WASABIAE
Descriptor:GrpU microcompartment shell protein
Authors:Wheatley, N.M., Thompson, M.C., Gidaniyan, S.D., Sawaya, M.R., Jorda, J., Yeates, T.O.
Deposit date:2014-01-24
Release date:2014-07-30
Last modified:2014-09-17
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Identification of a unique fe-s cluster binding site in a glycyl-radical type microcompartment shell protein.
J.Mol.Biol., 426, 2014
5V5D
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ROOM TEMPERATURE (280K) CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS PROTEASE IN COMPLEX WITH ALLOSTERIC INHIBITOR (COMPOUND 250)
Descriptor:ORF 17, 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-(phenylamino)benzoic acid
Authors:Thompson, M.C., Acker, T.M., Fraser, J.S., Craik, C.S.
Deposit date:2017-03-14
Release date:2017-04-12
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Allosteric Inhibitors, Crystallography, and Comparative Analysis Reveal Network of Coordinated Movement across Human Herpesvirus Proteases.
J. Am. Chem. Soc., 139, 2017
5V5E
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ROOM TEMPERATURE (280K) CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS PROTEASE IN COMPLEX WITH ALLOSTERIC INHIBITOR (COMPOUND 733)
Descriptor:ORF 17, 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-{[3-(trifluoromethoxy)phenyl]amino}benzoic acid
Authors:Thompson, M.C., Acker, T.M., Fraser, J.S., Craik, C.S.
Deposit date:2017-03-14
Release date:2017-04-12
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Allosteric Inhibitors, Crystallography, and Comparative Analysis Reveal Network of Coordinated Movement across Human Herpesvirus Proteases.
J. Am. Chem. Soc., 139, 2017
6W90
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DE NOVO DESIGNED NTF2 FOLD PROTEIN NT-9
Descriptor:NTF2 fold protein loop-helix-loop design NT-9, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
Authors:Thompson, M.C., Pan, X., Liu, L., Fraser, J.S., Kortemme, T.
Deposit date:2020-03-21
Release date:2020-08-19
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Expanding the space of protein geometries by computational design of de novo fold families.
Science, 369, 2020
6U5C
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RT XFEL STRUCTURE OF CYPA SOLVED USING MESH INJECTION SYSTEM
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M., Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
6U5D
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RT XFEL STRUCTURE OF CYPA SOLVED USING LCP INJECTION SYSTEM
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M., Young, I.D., Sierra, R.G., Brewster, A.S., Koralek, J.D., Boutet, S., Sauter, N.K., Fraser, J.S., Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
6U5E
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RT XFEL STRUCTURE OF CYPA SOLVED USING CELLOLUSE CARRIER MEDIA
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M., Nango, E., Nakane, T., Young, I.D., Brewster, A.S., Sugahara, M., Tanaka, R., Sauter, N.K., Tono, K., Iwata, S., Fraser, J.S., Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
6U5G
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MICROED STRUCTURE OF A FIB-MILLED CYPA CRYSTAL
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M., Martynowycz, M.W., Zhao, W., Gonen, T., Fraser, J.S., Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2020-03-11
Method:ELECTRON CRYSTALLOGRAPHY (2.5 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
4YUG
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 100 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUH
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 150 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUI
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 180 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUJ
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 240 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUK
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 260 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUL
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 280 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUM
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MULTICONFORMER SYNCHROTRON MODEL OF CYPA AT 300 K
Descriptor:Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
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PDB entries from 2020-11-25