Author results

3SSI
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PROTEINASE INHIBITOR SSI (STREPTOMYCES SUBTILISIN, INHIBITOR) FROM STREPTOMYCES ALBOGRISEOLUS
分子名称:STREPTOMYCES SUBTILISIN INHIBITOR
著者Suzuki, T., Nonaka, T., Mitsui, Y.
登録日1996-03-01
公開日1996-08-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Modulation of the Protein Proteinase Inhibitor Ssi (Streptomyces Subtilisin Inhibitor)
To be Published
4WJ3
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CRYSTAL STRUCTURE OF THE ASPARAGINE TRANSAMIDOSOME FROM PSEUDOMONAS AERUGINOSA
分子名称:Glutamyl-tRNA(Gln) amidotransferase subunit A, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit C, ...
著者Suzuki, T., Nakamura, A., Kato, K., Tanaka, I., Yao, M.
登録日2014-09-29
公開日2014-12-31
最終更新日2015-01-28
実験手法X-RAY DIFFRACTION (3.705 Å)
主引用文献Structure of the Pseudomonas aeruginosa transamidosome reveals unique aspects of bacterial tRNA-dependent asparagine biosynthesis
Proc.Natl.Acad.Sci.USA, 112, 2015
4WJ4
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CRYSTAL STRUCTURE OF NON-DISCRIMINATING ASPARTYL-TRNA SYNTHETASE FROM PSEUDOMONAS AERUGINOSA COMPLEXED WITH TRNA(ASN) AND ASPARTIC ACID
分子名称:Aspartate--tRNA(Asp/Asn) ligase, 76mer-tRNA, ASPARTIC ACID
著者Suzuki, T., Nakamura, A., Kato, K., Tanaka, I., Yao, M.
登録日2014-09-29
公開日2014-12-31
最終更新日2015-01-28
実験手法X-RAY DIFFRACTION (3.294 Å)
主引用文献Structure of the Pseudomonas aeruginosa transamidosome reveals unique aspects of bacterial tRNA-dependent asparagine biosynthesis
Proc.Natl.Acad.Sci.USA, 112, 2015
5UD5
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CRYSTAL STRUCTURE OF THE TRNA BINDING DOMAIN OF PYRROLYSYL-TRNA SYNTHETASE BOUND TO TRNA(PYL)
分子名称:Pyrrolysine--tRNA ligase, RNA (70-MER), ZINC ION
著者Suzuki, T., Soll, D.
登録日2016-12-23
公開日2017-10-11
最終更新日2017-12-06
実験手法X-RAY DIFFRACTION (2.347 Å)
主引用文献Crystal structures reveal an elusive functional domain of pyrrolysyl-tRNA synthetase.
Nat. Chem. Biol., 13, 2017
5V6X
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CRYSTAL STRUCTURE OF THE TRNA BINDING DOMAIN OF PYRROLYSYL-TRNA SYNTHETASE MUTANT (32A NTD) BOUND TO TRNA(PYL)
分子名称:Pyrrolysine--tRNA ligase, RNA (70-MER), ZINC ION
著者Suzuki, T., Soll, D.
登録日2017-03-17
公開日2017-10-11
最終更新日2017-12-06
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Crystal structures reveal an elusive functional domain of pyrrolysyl-tRNA synthetase.
Nat. Chem. Biol., 13, 2017
3WLU
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CRYSTAL STRUCTURE OF HUMAN GALECTIN-9 NCRD WITH SELENOLACTOSE
分子名称:Galectin-9, 2-(trimethylsilyl)ethyl 4-O-beta-D-galactopyranosyl-6-Se-methyl-6-seleno-beta-D-glucopyranoside
著者Makyio, H., Suzuki, T., Ando, H., Yamada, Y., Ishida, H., Kiso, M., Wakatsuki, S., Kato, R.
登録日2013-11-14
公開日2014-11-05
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Expanded potential of seleno-carbohydrates as a molecular tool for X-ray structural determination of a carbohydrate-protein complex with single/multi-wavelength anomalous dispersion phasing
Bioorg.Med.Chem., 22, 2014
5Y5N
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CRYSTAL STRUCTURE OF HUMAN SIRTUIN 2 IN COMPLEX WITH A SELECTIVE INHIBITOR
分子名称:NAD-dependent protein deacetylase sirtuin-2, ZINC ION, 2-[[3-(2-phenylethoxy)phenyl]amino]benzamide
著者Mellini, P., Itoh, Y., Tsumoto, H., Li, Y., Suzuki, M., Tokuda, N., Kakizawa, T., Miura, Y., Takeuchi, J., Lahtela-Kakkonen, M., Suzuki, T.
登録日2017-08-09
公開日2017-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Potent Mechanism-Based Sirtuin-2-Selective Inhibition by an In-Situ-Generated Occupant of the "Selectivity Pocket", Substrate Binding Site, and NAD+ Binding Pocket
CHEM SCI, 8, 2017
1WLE
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CRYSTAL STRUCTURE OF MAMMALIAN MITOCHONDRIAL SERYL-TRNA SYNTHETASE COMPLEXED WITH SERYL-ADENYLATE
分子名称:Seryl-tRNA synthetase, SERYL ADENYLATE
著者Chimnaronk, S., Jeppesen, M.G., Suzuki, T., Nyborg, J., Watanabe, K.
登録日2004-06-25
公開日2005-09-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Dual-mode recognition of noncanonical tRNAs(Ser) by seryl-tRNA synthetase in mammalian mitochondria
Embo J., 24, 2005
2ZW9
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CRYSTAL STRUCTURE OF TRNA WYBUTOSINE SYNTHESIZING ENZYME TYW4
分子名称:Leucine carboxyl methyltransferase 2, S-ADENOSYLMETHIONINE
著者Suzuki, Y., Noma, A., Suzuki, T., Ishitani, R., Nureki, O.
登録日2008-12-01
公開日2009-06-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
2ZWA
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CRYSTAL STRUCTURE OF TRNA WYBUTOSINE SYNTHESIZING ENZYME TYW4
分子名称:Leucine carboxyl methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE, CITRIC ACID, ...
著者Suzuki, Y., Noma, A., Suzuki, T., Ishitani, R., Nureki, O.
登録日2008-12-01
公開日2009-06-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
2ZZK
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CRYSTAL STRUCTURE OF TRNA WYBUTOSINE SYNTHESIZING ENZYME TYW4
分子名称:Leucine carboxyl methyltransferase 2, CITRIC ACID, TETRAETHYLENE GLYCOL
著者Suzuki, Y., Noma, A., Suzuki, T., Ishitani, R., Nureki, O.
登録日2009-02-17
公開日2009-06-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.706 Å)
主引用文献Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
5GVO
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SOLUTION NMR STRUCTURE OF A NEW LASSO PEPTIDE SPHAERICIN
分子名称:Uncharacterized protein
著者Hemmi, H., Kodani, S., Inoue, Y., Suzuki, M., Dohra, H., Suzuki, T., Ohnishi-Kameyama, M.
登録日2016-09-06
公開日2017-04-05
実験手法SOLUTION NMR
主引用文献Sphaericin, a Lasso Peptide from the Rare Actinomycete Planomonospora sphaerica
Eur.J.Org.Chem., 2017
4ZY3
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CRYSTAL STRUCTURE OF KEAP1 IN COMPLEX WITH A SMALL CHEMICAL COMPOUND, K67
分子名称:Kelch-like ECH-associated protein 1, FORMIC ACID, N,N'-[2-(2-oxopropyl)naphthalene-1,4-diyl]bis(4-ethoxybenzenesulfonamide)
著者Fukutomi, T., Iso, T., Suzuki, T., Takagi, K., Mizushima, T., Komatsu, M., Yamamoto, M.
登録日2015-05-21
公開日2016-05-25
最終更新日2016-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
Nat Commun, 7, 2016
1WTG
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HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITH ETHYLSULFONAMIDE-D-BIPHENYLALANINE-GLN-P-AMINOBENZAMIDINE
分子名称:Coagulation factor VII, Tissue factor, BETA-D-GLUCOSE, ...
著者Kadono, S., Sakamoto, S., Kikuchi, Y., Oh-Eda, M., Yabuta, N., Kitazawa, K., Yoshihashi, T., Suzuki, T., Koga, T., Hattori, K., Shiraishi, T., Kodama, M., Haramura, H., Ono, Y., Esaki, T., Sato, H., Watanabe, Y., Itoh, S., Ohta, M., Kozono, T.
登録日2004-11-23
公開日2005-11-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel interactions of large P3 moiety and small P4 moiety in the binding of the peptide mimetic factor VIIa inhibitor
Biochem.Biophys.Res.Commun., 326, 2005
1WUN
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HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITH ETHYLSULFONAMIDE-D-TRP-GLN-P-AMINOBENZAMIDINE
分子名称:Coagulation factor VII, Tissue factor, BETA-D-GLUCOSE, ...
著者Kadono, S., Sakamoto, A., Kikuchi, Y., Oh-eda, M., Yabuta, N., Yoshihashi, K., Kitazawa, T., Suzuki, T., Koga, T., Hattori, K., Shiraishi, T., Haramura, M., Kodama, H., Ono, Y., Esaki, T., Sato, H., Watanabe, Y., Itoh, S., Ohta, M., Kozono, T.
登録日2004-12-08
公開日2005-12-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-based design of P3 moieties in the peptide mimetic factor VIIa inhibitor
Biochem.Biophys.Res.Commun., 327, 2005
1WV7
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HUMAN FACTOR VIIA-TISSUE FACTOR COMPLEXED WITH ETHYLSULFONAMIDE-D-5-PROPOXY-TRP-GLN-P-AMINOBENZAMIDINE
分子名称:Coagulation factor VII, Tissue factor, BETA-D-GLUCOSE, ...
著者Kadono, S., Sakamoto, A., Kikuchi, Y., Oh-eda, M., Yabuta, N., Yoshihashi, K., Kitazawa, T., Suzuki, T., Koga, T., Hattori, K., Shiraishi, T., Haramura, M., Kodama, H., Ono, Y., Esaki, T., Sato, H., Watanabe, Y., Itoh, S., Ohta, M., Kozono, T.
登録日2004-12-11
公開日2005-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based design of P3 moieties in the peptide mimetic factor VIIa inhibitor
Biochem.Biophys.Res.Commun., 327, 2005
2E4M
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CRYSTAL STRUCTURE OF HEMAGGLUTININ SUBCOMPONENT COMPLEX (HA-33/HA-17) FROM CLOSTRIDIUM BOTULINUM SEROTYPE D STRAIN 4947
分子名称:Main hemagglutinin component, HA-17
著者Hasegawa, K., Watanabe, T., Suzuki, T., Yamano, A., Niwa, K., Ohyama, T.
登録日2006-12-13
公開日2007-06-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A Novel Subunit Structure of Clostridium botulinum Serotype D Toxin Complex with Three Extended Arms
J.Biol.Chem., 282, 2007
2VQE
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MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
分子名称:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
著者Kurata, S., Weixlbaumer, A., Ohtsuki, T., Shimazaki, T., Wada, T., Kirino, Y., Takai, K., Watanabe, K., Ramakrishnan, V., Suzuki, T.
登録日2008-03-13
公開日2008-04-29
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding.
J.Biol.Chem., 283, 2008
2VQF
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MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
分子名称:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
著者Kurata, S., Weixlbaumer, A., Ohtsuki, T., Shimazaki, T., Wada, T., Kirino, Y., Takai, K., Watanabe, K., Ramakrishnan, V., Suzuki, T.
登録日2008-03-14
公開日2008-04-29
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding.
J.Biol.Chem., 283, 2008
3WY9
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CRYSTAL STRUCTURE OF A COMPLEX OF THE ARCHAEAL RIBOSOMAL STALK PROTEIN AP1 AND THE GDP-BOUND ARCHAEAL ELONGATION FACTOR AEF1ALPHA
分子名称:Elongation factor 1-alpha, 50S ribosomal protein L12, GUANOSINE-5'-DIPHOSPHATE
著者Ito, K., Honda, T., Suzuki, T., Miyoshi, T., Murakami, R., Yao, M., Uchiumi, T.
登録日2014-08-22
公開日2014-12-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha
Nucleic Acids Res., 2014
3WYA
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CRYSTAL STRUCTURE OF GDP-BOUND EF1ALPHA FROM PYROCOCCUS HORIKOSHII
分子名称:Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE
著者Ito, K., Honda, T., Suzuki, T., Miyoshi, T., Murakami, R., Yao, M., Uchiumi, T.
登録日2014-08-22
公開日2014-12-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha
Nucleic Acids Res., 2014
5B2H
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CRYSTAL STRUCTURE OF HA33 FROM CLOSTRIDIUM BOTULINUM SEROTYPE C STRAIN YOICHI
分子名称:HA-33, TRIETHYLENE GLYCOL
著者Akiyama, T., Hayashi, S., Matsumoto, T., Hasegawa, K., Yamano, A., Suzuki, T., Niwa, K., Watanabe, T., Sagane, Y., Yajima, S.
登録日2016-01-15
公開日2016-06-15
最終更新日2016-07-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conformational divergence in the HA-33/HA-17 trimer of serotype C and D botulinum toxin complex
Biochem.Biophys.Res.Commun., 476, 2016
1WPW
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CRYSTAL STRUCTURE OF IPMDH FROM SULFOLOBUS TOKODAII
分子名称:3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Hirose, R., Sakurai, M., Suzuki, T., Moriyama, H., Sato, T., Yamagishi, A., Oshima, T., Tanaka, N.
登録日2004-09-14
公開日2004-10-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of IPMDH from Sulfolobus tokodaii
To be Published
1WU0
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SOLUTION STRUCTURE OF SUBUNIT C OF F1FO-ATP SYNTHASE FROM THE THERMOPHILIC BACILLUS PS3
分子名称:ATP synthase C chain
著者Nakano, T., Ikegami, T., Suzuki, T., Yoshida, M., Akutsu, H.
登録日2004-11-29
公開日2005-12-13
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献solution structure TF1Fo subunit c
To be Published
3VUO
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CRYSTAL STRUCTURE OF NONTOXIC NONHEMAGGLUTININ SUBCOMPONENT (NTNHA) FROM CLOSTRIDIUM BOTULINUM SEROTYPE D STRAIN 4947
分子名称:NTNHA
著者Sagane, Y., Miyashita, S.-I., Miyata, K., Matsumoto, T., Inui, K., Hayashi, S., Suzuki, T., Hasegawa, K., Yajima, S., Yamano, A., Niwa, K., Watanabe, T.
登録日2012-07-03
公開日2012-09-19
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Small-angle X-ray scattering reveals structural dynamics of the botulinum neurotoxin associating protein, nontoxic nonhemagglutinin
Biochem.Biophys.Res.Commun., 425, 2012