3IY9 | | LEISHMANIA TARENTOLAE MITOCHONDRIAL LARGE RIBOSOMAL SUBUNIT MODEL | | Descriptor: | Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit, 39S ribosomal protein L2, mitochondrial, ... | | Authors: | Sharma, M.R., Booth, T.M., Simpson, L., Maslov, D.A., Agrawal, R.K. | | Deposit date: | 2009-04-20 | | Release date: | 2009-07-07 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (14.1 Å) | | Cite: | Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
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1X18 | | CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT | | Descriptor: | 5'-R(P*CP*GP*AP*UP*GP*GP*CP*GP*AP*AP*G)-3', RNA (31-MER), 5'-R(P*UP*UP*CP*CP*CP*GP*GP*GP*CP*CP*UP*GP*GP*GP*GP*CP*CP*CP*GP*C)-3', ... | | Authors: | Sharma, M.R., Barat, C., Agrawal, R.K. | | Deposit date: | 2005-04-02 | | Release date: | 2005-05-17 | | Last modified: | 2013-12-18 | | Method: | ELECTRON MICROSCOPY (13.5 Å) | | Cite: | Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
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1X1L | | INTERACTION OF ERA,A GTPASE PROTEIN, WITH THE 3'MINOR DOMAIN OF THE 16S RRNA WITHIN THE THERMUS THERMOPHILUS 30S SUBUNIT. | | Descriptor: | RNA (130-MER), GTP-binding protein era | | Authors: | Sharma, M.R., Barat, C., Agrawal, R.K. | | Deposit date: | 2005-04-06 | | Release date: | 2005-05-17 | | Last modified: | 2011-07-13 | | Method: | ELECTRON MICROSCOPY (13.5 Å) | | Cite: | Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
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3IY8 | | LEISHMANIA TARENTOLAE MITONCHONDRIAL RIBOSOME SMALL SUBUNIT | | Descriptor: | Leishmania tarentolae mitochondrial small subunit, 30S ribosomal protein S5, 30S ribosomal protein S6, ... | | Authors: | Sharma, M.R., Booth, T.M., Simpson, L., Maslov, D.A., Agrawal, R.K. | | Deposit date: | 2009-04-16 | | Release date: | 2009-07-07 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (14.1 Å) | | Cite: | Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
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4V61 | | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME. | | Descriptor: | 16S rRNA, Ribosomal Protein S2, Ribosomal Protein S3, ... | | Authors: | Sharma, M.R., Wilson, D.N., Datta, P.P., Barat, C., Schluenzen, F., Fucini, P., Agrawal, R.K. | | Deposit date: | 2007-11-09 | | Release date: | 2014-07-09 | | Last modified: | 2015-03-25 | | Method: | ELECTRON MICROSCOPY (9.4 Å) | | Cite: | Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
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6DZI | | CRYO-EM STRUCTURE OF MYCOBACTERIUM SMEGMATIS 70S C(MINUS) RIBOSOME 70S-MPY COMPLEX | | Descriptor: | 16S rRNA, CONSERVED PROTEIN DOMAIN, 30S ribosomal protein S3, ... | | Authors: | Sharma, M.R., Li, Y., Korripella, R., Yang, Y., Kaushal, P.S., Lin, Q., Wade, J.T., Gray, A.G., Derbyshire, K.M., Agrawal, R.K., Ojha, A. | | Deposit date: | 2018-07-05 | | Release date: | 2018-09-26 | | Method: | ELECTRON MICROSCOPY (3.46 Å) | | Cite: | Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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6DZK | | CRYO-EM STRUCTURE OF MYCOBACTERIUM SMEGMATIS C(MINUS) 30S RIBOSOMAL SUBUNIT WITH MPY | | Descriptor: | 16S rRNA, Conserved domain protein, 30S ribosomal protein S3, ... | | Authors: | Sharma, M.R., Li, Y., Korripella, R., Yang, Y., Kaushal, P.S., Lin, Q., Wade, J.T., Gray, A.G., Derbyshire, K.M., Agrawal, R.K., Ojha, A. | | Deposit date: | 2018-07-05 | | Release date: | 2018-09-19 | | Last modified: | 2018-10-24 | | Method: | ELECTRON MICROSCOPY (3.6 Å) | | Cite: | Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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6DZP | | CRYO-EM STRUCTURE OF MYCOBACTERIUM SMEGMATIS C(MINUS) 50S RIBOSOMAL SUBUNIT | | Descriptor: | 23S rRNA, 5S rRNA, 50S ribosomal protein L2, ... | | Authors: | Sharma, M.R., Li, Y., Korripella, R., Yang, Y., Kaushal, P.S., Lin, Q., Wade, J.T., Gray, A.G., Derbyshire, K.M., Agrawal, R.K., Ojha, A. | | Deposit date: | 2018-07-05 | | Release date: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (3.42 Å) | | Cite: | Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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1T1M | | BINDING POSITION OF RIBOSOME RECYCLING FACTOR (RRF) ON THE E. COLI 70S RIBOSOME | | Descriptor: | dodecamer fragment of double helix from 23S rRNA, 42-mer fragment of double helix from 16S rRNA, ribosome recycling factor | | Authors: | Agrawal, R.K., Sharma, M.R., Kiel, M.C., Hirokawa, G., Booth, T.M., Spahn, C.M., Grassucci, R.A., Kaji, A., Frank, J. | | Deposit date: | 2004-04-16 | | Release date: | 2004-06-15 | | Last modified: | 2011-07-13 | | Method: | ELECTRON MICROSCOPY (12 Å) | | Cite: | Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
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1T1O | | COMPONENTS OF THE CONTROL 70S RIBOSOME TO PROVIDE REFERENCE FOR THE RRF BINDING SITE | | Descriptor: | dodecamer fragment of double helix from 23S rRNA, 19-mer fragment of the 23S rRNA, 42-mer fragment of double helix from 16S rRNA | | Authors: | Agrawal, R.K., Sharma, M.R., Kiel, M.C., Hirokawa, G., Booth, T.M., Spahn, C.M., Grassucci, R.A., Kaji, A., Frank, J. | | Deposit date: | 2004-04-16 | | Release date: | 2004-06-15 | | Last modified: | 2011-07-13 | | Method: | ELECTRON MICROSCOPY (12 Å) | | Cite: | Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
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2BCW | | COORDINATES OF THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L11,C-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L7/L12 AND A PORTION OF THE G' DOMAIN OF ELONGATION FACTOR G, AS FITTED INTO CRYO-EM MAP OF AN ESCHERICHIA COLI 70S*EF-G*GDP*FUSIDIC ACID COMPLEX | | Descriptor: | 50S ribosomal protein L11, 50S ribosomal protein L7/L12, Elongation factor G | | Authors: | Datta, P.P., Sharma, M.R., Qi, L., Frank, J., Agrawal, R.K. | | Deposit date: | 2005-10-19 | | Release date: | 2005-12-20 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (11.2 Å) | | Cite: | Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM.
Mol.Cell, 20, 2005
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2FTC | | STRUCTURAL MODEL FOR THE LARGE SUBUNIT OF THE MAMMALIAN MITOCHONDRIAL RIBOSOME | | Descriptor: | Mitochondrial 16S ribosomal RNA, Mitochondrial ribosomal protein L1, mitochondrial ribosomal protein L2, ... | | Authors: | Mears, J.A., Sharma, M.R., Gutell, R.R., Richardson, P.E., Agrawal, R.K., Harvey, S.C. | | Deposit date: | 2006-01-24 | | Release date: | 2006-04-11 | | Last modified: | 2011-07-13 | | Method: | ELECTRON MICROSCOPY (12.1 Å) | | Cite: | A Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome
J.Mol.Biol., 358, 2006
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2R1C | | COORDINATES OF THE THERMUS THERMOPHILUS RIBOSOME BINDING FACTOR A (RBFA) HOMOLOGY MODEL AS FITTED INTO THE CRYO-EM MAP OF A 30S-RBFA COMPLEX | | Descriptor: | Ribosome-binding factor A | | Authors: | Datta, P.P., Wilson, D.N., Kawazoe, M., Swami, N.K., Kaminishi, T., Sharma, M.R., Booth, T.M., Takemoto, C., Fucini, P., Yokoyama, S., Agrawal, R.K. | | Deposit date: | 2007-08-22 | | Release date: | 2008-03-18 | | Last modified: | 2011-07-13 | | Method: | ELECTRON MICROSCOPY (12.5 Å) | | Cite: | Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
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2R1G | | COORDINATES OF THE THERMUS THERMOPHILUS 30S COMPONENTS NEIGHBORING RBFA AS OBTAINED BY FITTING INTO THE CRYO-EM MAP OF A 30S-RBFA COMPLEX | | Descriptor: | 16S RIBOSOMAL RNA HELIX 1, 16S RIBOSOMAL RNA HELIX 18, 16S RIBOSOMAL RNA HELIX 27, ... | | Authors: | Datta, P.P., Wilson, D.N., Kawazoe, M., Swami, N.K., Kaminishi, T., Sharma, M.R., Booth, T.M., Takemoto, C., Fucini, P., Yokoyama, S., Agrawal, R.K. | | Deposit date: | 2007-08-22 | | Release date: | 2008-03-18 | | Last modified: | 2011-07-13 | | Method: | ELECTRON MICROSCOPY (12.5 Å) | | Cite: | Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
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3JD5 | | CRYO-EM STRUCTURE OF THE SMALL SUBUNIT OF THE MAMMALIAN MITOCHONDRIAL RIBOSOME | | Descriptor: | 28S ribosomal RNA, mitochondial, 28S ribosomal protein S2, ... | | Authors: | Kaushal, P.S., Sharma, M.R., Booth, T.M., Haque, E.M., Tung, C.S., Sanbonmatsu, K.Y., Spremulli, L.L., Agrawal, R.K. | | Deposit date: | 2016-04-08 | | Release date: | 2016-07-13 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (7 Å) | | Cite: | Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome.
Proc.Natl.Acad.Sci.USA, 111, 2014
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6NEQ | | STRUCTURE OF HUMAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 3 BOUND TO THE SMALL RIBOSOMAL SUBUNIT-CLASS-II | | Descriptor: | 28S ribosomal RNA, mitochondrial, 28S ribosomal protein S24, ... | | Authors: | Sharma, M., Koripella, R., Agrawal, R. | | Deposit date: | 2018-12-18 | | Release date: | 2019-02-27 | | Method: | ELECTRON MICROSCOPY (3.32 Å) | | Cite: | Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
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6NF8 | | STRUCTURE OF HUMAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 3 BOUND TO THE SMALL RIBOSOMAL SUBUNIT -CLASS I | | Descriptor: | 28S ribosomal RNA, mitochondria, 28S ribosomal protein S24, ... | | Authors: | Sharma, M., Koripella, R., Agrawal, R. | | Deposit date: | 2018-12-19 | | Release date: | 2019-02-27 | | Method: | ELECTRON MICROSCOPY (3.48 Å) | | Cite: | Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
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2DYJ | | CRYSTAL STRUCTURE OF RIBOSOME-BINDING FACTOR A FROM THERMUS THERMOPHILUS HB8 | | Descriptor: | Ribosome-binding factor A | | Authors: | Kawazoe, M., Takemoto, C., Nakayama-Ushikoshi, R., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-09-14 | | Release date: | 2007-03-14 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.84 Å) | | Cite: | Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
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