Author results

3WHJ
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CRYSTAL STRUCTURE OF NAS2 N-TERMINAL DOMAIN
Descriptor:Probable 26S proteasome regulatory subunit p27, SULFATE ION, CADMIUM ION
Authors:Satoh, T., Saeki, Y., Hiromoto, T., Wang, Y.-H., Uekusa, Y., Yagi, H., Yoshihara, H., Yagi-Utsumi, M., Mizushima, T., Tanaka, K., Kato, K.
Deposit date:2013-08-26
Release date:2014-03-26
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis for Proteasome Formation Controlled by an Assembly Chaperone Nas2
Structure, 2014
3WHK
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CRYSTAL STRUCTURE OF PAN-RPT5C CHIMERA
Descriptor:Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A, ADENOSINE-5'-TRIPHOSPHATE
Authors:Satoh, T., Saeki, Y., Hiromoto, T., Wang, Y.-H., Uekusa, Y., Yagi, H., Yoshihara, H., Yagi-Utsumi, M., Mizushima, T., Tanaka, K., Kato, K.
Deposit date:2013-08-26
Release date:2014-03-26
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Proteasome Formation Controlled by an Assembly Chaperone Nas2
Structure, 2014
3WHL
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CRYSTAL STRUCTURE OF NAS2 N-TERMINAL DOMAIN COMPLEXED WITH PAN-RPT5C CHIMERA
Descriptor:Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A, Probable 26S proteasome regulatory subunit p27, ...
Authors:Satoh, T., Saeki, Y., Hiromoto, T., Wang, Y.-H., Uekusa, Y., Yagi, H., Yoshihara, H., Yagi-Utsumi, M., Mizushima, T., Tanaka, K., Kato, K.
Deposit date:2013-08-26
Release date:2014-03-26
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural Basis for Proteasome Formation Controlled by an Assembly Chaperone Nas2
Structure, 2014
4YGB
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, MONOCLINIC CALCIUM-FREE FORM
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, GLYCEROL, ...
Authors:Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
Deposit date:2015-02-26
Release date:2016-04-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Interaction mode of coagulation factors V and VIII with the cargo receptor MCFD2/ERGIC-53 complex
To Be Published
4YGC
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, MONOCLINIC CALCIUM-BOUND FORM 1
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, CALCIUM ION, ...
Authors:Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
Deposit date:2015-02-26
Release date:2016-04-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Interaction mode of coagulation factors V and VIII with the cargo receptor MCFD2/ERGIC-53 complex
To Be Published
4YGD
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, MONOCLINIC CALCIUM-BOUND FORM 2
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, CALCIUM ION, ...
Authors:Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
Deposit date:2015-02-26
Release date:2016-04-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Interaction mode of coagulation factors V and VIII with the cargo receptor MCFD2/ERGIC-53 complex
To Be Published
4YGE
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, TRIGONAL CALCIUM-BOUND FORM 2
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, CALCIUM ION, ...
Authors:Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
Deposit date:2015-02-26
Release date:2016-04-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Interaction mode of coagulation factors V and VIII with the cargo receptor MCFD2/ERGIC-53 complex
To Be Published
5DKX
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CRYSTAL STRUCTURE OF GLUCOSIDASE II ALPHA SUBUNIT (TRIS-BOUND FROM)
Descriptor:Alpha glucosidase-like protein, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION
Authors:Satoh, T., Toshimori, T., Yan, G., Yamaguchi, T., Kato, K.
Deposit date:2015-09-04
Release date:2016-01-27
Last modified:2016-02-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control.
Sci Rep, 6, 2016
5DKY
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CRYSTAL STRUCTURE OF GLUCOSIDASE II ALPHA SUBUNIT (DNJ-BOUND FROM)
Descriptor:Alpha glucosidase-like protein, 1-DEOXYNOJIRIMYCIN
Authors:Satoh, T., Toshimori, T., Yan, G., Yamaguchi, T., Kato, K.
Deposit date:2015-09-04
Release date:2016-01-27
Last modified:2016-02-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control.
Sci Rep, 6, 2016
5DKZ
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CRYSTAL STRUCTURE OF GLUCOSIDASE II ALPHA SUBUNIT (ALPHA3-GLC2-BOUND FROM)
Descriptor:Alpha glucosidase-like protein, ALPHA-D-GLUCOSE
Authors:Satoh, T., Toshimori, T., Yan, G., Yamaguchi, T., Kato, K.
Deposit date:2015-09-04
Release date:2016-01-27
Last modified:2016-02-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control.
Sci Rep, 6, 2016
5DL0
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CRYSTAL STRUCTURE OF GLUCOSIDASE II ALPHA SUBUNIT (GLC1MAN2-BOUND FROM)
Descriptor:Alpha glucosidase-like protein, ALPHA-D-MANNOSE, ALPHA-D-GLUCOSE
Authors:Satoh, T., Toshimori, T., Yan, G., Yamaguchi, T., Kato, K.
Deposit date:2015-09-04
Release date:2016-01-27
Last modified:2016-02-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control.
Sci Rep, 6, 2016
5H18
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CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF UGGT (UDP-GLUCOSE-BOUND FORM) FROM THERMOMYCES DUPONTII
Descriptor:UGGT, URIDINE-5'-DIPHOSPHATE-GLUCOSE, CALCIUM ION, ...
Authors:Satoh, T., Zhu, T., Toshimori, T., Kamikubo, H., Uchihashi, T., Kato, K.
Deposit date:2016-10-08
Release date:2017-09-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
5Y7F
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CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF UGGT (UDP-BOUND FORM) FROM THERMOMYCES DUPONTII
Descriptor:UGGT, URIDINE-5'-DIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Satoh, T., Song, C., Zhu, T., Toshimori, T., Murata, K., Hayashi, Y., Kamikubo, H., Uchihashi, T., Kato, K.
Deposit date:2017-08-17
Release date:2017-09-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
5Y7O
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CRYSTAL STRUCTURE OF FOLDING SENSOR REGION OF UGGT FROM THERMOMYCES DUPONTII
Descriptor:UGGT
Authors:Satoh, T., Song, C., Zhu, T., Toshimori, T., Murata, K., Hayashi, Y., Kamikubo, H., Uchihashi, T., Kato, K.
Deposit date:2017-08-17
Release date:2017-09-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
3WNX
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, CALCIUM/MAN3-BOUND FORM
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, CALCIUM ION, ...
Authors:Satoh, T., Suzuki, K., Yamaguchi, T., Kato, K.
Deposit date:2013-12-18
Release date:2014-01-15
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Basis for Disparate Sugar-Binding Specificities in the Homologous Cargo Receptors ERGIC-53 and VIP36
Plos One, 9, 2014
5JQP
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CRYSTAL STRUCTURE OF ER GLUCOSIDASE II HETERODIMERIC COMPLEX CONSISTING OF CATALYTIC SUBUNIT AND THE BINDING DOMAIN OF REGULATORY SUBUNIT
Descriptor:Alpha glucosidase-like protein, Glucosidase 2 subunit beta-like protein, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Satoh, T., Toshimori, T., Noda, M., Uchiyama, S., Kato, K.
Deposit date:2016-05-05
Release date:2016-09-14
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interaction mode between catalytic and regulatory subunits in glucosidase II involved in ER glycoprotein quality control.
Protein Sci., 25, 2016
3WHT
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, CALCIUM-FREE FORM
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, CHLORIDE ION, ...
Authors:Satoh, T., Suzuki, K., Kato, K.
Deposit date:2013-08-30
Release date:2014-01-15
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Disparate Sugar-Binding Specificities in the Homologous Cargo Receptors ERGIC-53 and VIP36
Plos One, 9, 2014
3WHU
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CRYSTAL STRUCTURE OF ERGIC-53/MCFD2, CALCIUM/MAN2-BOUND FORM
Descriptor:Protein ERGIC-53, Multiple coagulation factor deficiency protein 2, CALCIUM ION, ...
Authors:Satoh, T., Suzuki, K., Kato, K.
Deposit date:2013-08-30
Release date:2014-01-15
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Disparate Sugar-Binding Specificities in the Homologous Cargo Receptors ERGIC-53 and VIP36
Plos One, 9, 2014
2A6V
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CRYSTAL STRUCTURE OF EMP46P CARBOHYDRATE RECOGNITION DOMAIN (CRD), POTASSIUM-BOUND FORM
Descriptor:Emp46p, POTASSIUM ION, 1,2-ETHANEDIOL
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6W
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CRYSTAL STRUCTURE OF EMP46P CARBOHYDRATE RECOGNITION DOMAIN (CRD), METAL-FREE FORM
Descriptor:Emp46p
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6X
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CRYSTAL STRUCTURE OF EMP46P CARBOHYDRATE RECOGNITION DOMAIN (CRD), Y131F MUTANT
Descriptor:Emp46p, POTASSIUM ION, 1,2-ETHANEDIOL
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6Y
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CRYSTAL STRUCTURE OF EMP47P CARBOHYDRATE RECOGNITION DOMAIN (CRD), TETRAGONAL CRYSTAL FORM
Descriptor:Emp47p (form1), SULFATE ION
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6Z
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CRYSTAL STRUCTURE OF EMP47P CARBOHYDRATE RECOGNITION DOMAIN (CRD), MONOCLINIC CRYSTAL FORM 1
Descriptor:Emp47p (form2)
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A70
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CRYSTAL STRUCTURE OF EMP47P CARBOHYDRATE RECOGNITION DOMAIN (CRD), MONOCLINIC CRYSTAL FORM 2
Descriptor:Emp47p, 1,2-ETHANEDIOL
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Katoh, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A71
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CRYSTAL STRUCTURE OF EMP47P CARBOHYDRATE RECOGNITION DOMAIN (CRD), ORTHORHOMBIC CRYSTAL FORM
Descriptor:Emp47p
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
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