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1BHJ
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BU of 1bhj by Molmil
CRYSTAL STRUCTURE OF APO-GLYCINE N-METHYLTRANSFERASE (GNMT)
Descriptor: GLYCINE N-METHYLTRANSFERASE
Authors:Pattanayek, R, Newcomer, M.E, Wagner, C.
Deposit date:1998-06-09
Release date:1999-01-06
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of apo-glycine N-methyltransferase (GNMT).
Protein Sci., 7, 1998
3DVL
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BU of 3dvl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M.
Deposit date:2008-07-18
Release date:2009-07-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
To be Published
2GBL
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BU of 2gbl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Williams, D.R, Pattanayek, S, Xu, Y, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
Deposit date:2006-03-10
Release date:2007-01-23
Last modified:2021-07-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.
Embo J., 25, 2006
2QKE
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BU of 2qke by Molmil
Wild Type Crystal Structure of Full Length Circadian Clock Protein KaiB from Thermosynechococcus elongatus BP-1
Descriptor: Circadian clock protein kaiB
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2007-07-10
Release date:2008-06-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation.
Embo J., 27, 2008
5C5E
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BU of 5c5e by Molmil
Structure of KaiA dimer in complex with C-terminal KaiC peptide at 2.8 A resolution
Descriptor: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[(sulfanylcarbonyl)amino]benzoic acid, Circadian clock protein KaiA, KaiC C-terminal peptide
Authors:Pattanayek, R, Egli, M.
Deposit date:2015-06-19
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Protein-Protein Interactions in the Cyanobacterial Circadian Clock: Structure of KaiA Dimer in Complex with C-Terminal KaiC Peptides at 2.8 angstrom Resolution.
Biochemistry, 54, 2015
3S1A
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BU of 3s1a by Molmil
Crystal structure of the phosphorylation-site double mutant S431E/T432E of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Williams, D.W, Rossi, G, Weigand, S, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
Deposit date:2011-05-14
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Combined SAXS/EM Based Models of the S. elongatus Post-Translational Circadian Oscillator and its Interactions with the Output His-Kinase SasA.
Plos One, 6, 2011
3JZM
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BU of 3jzm by Molmil
Crystal structure of the phosphorylation-site mutant T432A of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2009-09-23
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K09
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BU of 3k09 by Molmil
Crystal structure of the phosphorylation-site mutant S431D of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2009-09-24
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0C
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BU of 3k0c by Molmil
Crystal structure of the phosphorylation-site double mutant S431A/T432E of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2009-09-24
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0F
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BU of 3k0f by Molmil
Crystal structure of the phosphorylation-site double mutant T426A/T432A of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2009-09-24
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0A
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BU of 3k0a by Molmil
Crystal structure of the phosphorylation-site mutant S431A of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2009-09-24
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
3K0E
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BU of 3k0e by Molmil
Crystal structure of the phosphorylation-site mutant T426N of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M, Pattanayek, S.
Deposit date:2009-09-24
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of KaiC Circadian Clock Mutant Proteins: A New Phosphorylation Site at T426 and Mechanisms of Kinase, ATPase and Phosphatase.
Plos One, 4, 2009
4O0M
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BU of 4o0m by Molmil
Crystal structure of T. Elongatus BP-1 Clock Protein KaiC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M.
Deposit date:2013-12-13
Release date:2014-05-14
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:An arginine tetrad as mediator of input-dependent and input-independent ATPases in the clock protein KaiC
Acta Crystallogr.,Sect.D, D70, 2014
4G86
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BU of 4g86 by Molmil
Crystal structure of the redox-active cofactor DBMIB bound to the full length circadian clock protein KaiA from Synechococcus elongatus
Descriptor: 2,5-DIBROMO-3-ISOPROPYL-6-METHYLBENZO-1,4-QUINONE, Circadian clock protein kaiA, GLYCEROL, ...
Authors:Pattanayek, R, Egli, M.
Deposit date:2012-07-21
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.387 Å)
Cite:Crystal Structure of the Redox-Active Cofactor Dibromothymoquinone Bound to Circadian Clock Protein KaiA and Structural Basis for Dibromothymoquinone's Ability to Prevent Stimulation of KaiC Phosphorylation by KaiA.
Biochemistry, 51, 2012
1TF7
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BU of 1tf7 by Molmil
Crystal Structure of Circadian Clock Protein KaiC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, KaiC
Authors:Pattanayek, R, Wang, J, Mori, T, Xu, Y, Johnson, C.H, Egli, M.
Deposit date:2004-05-26
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Visualizing a Circadian Clock Protein; Crystal Structure of KaiC and Functional Insights
Mol.Cell, 15, 2004
1XUX
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BU of 1xux by Molmil
Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogs
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(NMS)P*AP*CP*GP*C)-3')
Authors:Pattanayek, R, Sethaphong, L, Pan, C, Prhavc, M, Prakash, T.P, Manoharan, M, Egli, M.
Deposit date:2004-10-26
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogues.
J.Am.Chem.Soc., 126, 2004
1XUW
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BU of 1xuw by Molmil
Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogs
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(NMT)P*AP*CP*GP*C)-3')
Authors:Pattanayek, R, Sethaphong, L, Pan, C, Prhavc, M, Prakash, T.P, Manoharan, M, Egli, M.
Deposit date:2004-10-26
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogues.
J.Am.Chem.Soc., 126, 2004
4KSO
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BU of 4kso by Molmil
Crystal Structure of Circadian clock protein KaiB from S.Elongatus
Descriptor: Circadian clock protein KaiB
Authors:Pattanayek, R, Egli, M.
Deposit date:2013-05-17
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.622 Å)
Cite:CryoEM and Molecular Dynamics of the Circadian KaiB-KaiC Complex Indicates KaiB Monomers Interact with KaiC and Block ATP Binding Clefts.
J.Mol.Biol., 425, 2013
1VTM
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BU of 1vtm by Molmil
STRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTION
Descriptor: Coat protein, RNA (5'-R(P*GP*AP*A)-3')
Authors:Stubbs, G, Pattanayek, R.
Deposit date:1992-03-30
Release date:1994-07-31
Last modified:2024-02-14
Method:FIBER DIFFRACTION (3.5 Å)
Cite:Structure of the U2 strain of tobacco mosaic virus refined at 3.5 A resolution using X-ray fiber diffraction.
J.Mol.Biol., 228, 1992
6M7H
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BU of 6m7h by Molmil
Structure of calmodulin with KN93
Descriptor: CALCIUM ION, Calmodulin-1, N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide
Authors:Damo, S.M, Pattanayek, R, Johnson, C.N.
Deposit date:2018-08-20
Release date:2019-08-28
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The CaMKII inhibitor KN93-calmodulin interaction and implications for calmodulin tuning of NaV1.5 and RyR2 function.
Cell Calcium, 82, 2019
4DUG
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BU of 4dug by Molmil
Crystal Structure of Circadian Clock Protein KaiC E318A Mutant
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION, ...
Authors:Egli, M, Mori, T, Pattanayek, R, Xu, Y, Qin, X, Johnson, C.H.
Deposit date:2012-02-21
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.292 Å)
Cite:Dephosphorylation of the Core Clock Protein KaiC in the Cyanobacterial KaiABC Circadian Oscillator Proceeds via an ATP Synthase Mechanism.
Biochemistry, 51, 2012
1U9I
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BU of 1u9i by Molmil
Crystal Structure of Circadian Clock Protein KaiC with Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, KaiC, MAGNESIUM ION
Authors:Xu, Y, Mori, T, Pattanayek, R, Pattanayek, S, Egli, M, Johnson, C.H.
Deposit date:2004-08-09
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses
PROC.NATL.ACAD.SCI.USA, 101, 2004
4IJM
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BU of 4ijm by Molmil
Crystal structure of circadian clock protein KaiC A422V mutant
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION, ...
Authors:Egli, M, Pattanayek, R.
Deposit date:2012-12-21
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.352 Å)
Cite:Loop-Loop Interactions Regulate KaiA-Stimulated KaiC Phosphorylation in the Cyanobacterial KaiABC Circadian Clock.
Biochemistry, 52, 2013
2TMV
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BU of 2tmv by Molmil
VISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTION
Descriptor: CALCIUM ION, RNA (5'-R(P*GP*AP*A)-3'), TMV COAT PROTEIN
Authors:Stubbs, G, Pattanayek, R, Namba, K.
Deposit date:1988-09-15
Release date:1989-01-09
Last modified:2024-02-21
Method:FIBER DIFFRACTION (2.9 Å)
Cite:Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction.
J.Mol.Biol., 208, 1989
1VRO
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BU of 1vro by Molmil
Selenium-Assisted Nucleic Acid Crystallography: Use of Phosphoroselenoates for MAD Phasing of a DNA Structure
Descriptor: 5'-D(*CP*(GMS)P*CP*GP*CP*G)-3', MAGNESIUM ION, SPERMINE
Authors:Wilds, C.J, Pattanayek, R, Pan, C, Wawrzak, Z, Egli, M.
Deposit date:2005-04-14
Release date:2005-04-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Selenium-Assisted Nucleic Acid Crystallography: Use of Phosphoroselenoates for MAD Phasing of a DNA Structure
J.Am.Chem.Soc., 124, 2002

 

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