Author results

2AY1
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-AMINOHYDROCINNAMIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 4-AMINOHYDROCINNAMIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY2
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH CYCLOHEXANE PROPIONIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, CYCLOHEXANE PROPIONIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY3
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-(3,4-DIMETHOXYPHENYL)PROPIONIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 3-(3,4-DIMETHOXYPHENYL)PROPIONIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY4
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-(P-TOLYL)PROPIONIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 3-(P-TOLYL)PROPIONIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY5
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEPROPIONIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, INDOLYLPROPIONIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY6
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEBUTYRIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 3-INDOLEBUTYRIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY7
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-PHENYLBUTYRIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 4-PHENYL-BUTANOIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY8
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-(2-THIENYL)BUTYRIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 4-(2-THIENYL)BUTYRIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY9
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AROMATIC AMINO ACID AMINOTRANSFERASE WITH 5-PHENYLVALERIC ACID
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 5-PHENYLVALERIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
1ARS
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X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM
Descriptor:ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A., Higuchi, T., Hirotsu, K.
Deposit date:1993-08-02
Release date:1994-08-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic study of pyridoxal 5'-phosphate-type aspartate aminotransferases from Escherichia coli in open and closed form.
J.Biochem.(Tokyo), 116, 1994
1ART
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X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM
Descriptor:ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, 2-methyl-L-aspartic acid
Authors:Okamoto, A., Higuchi, T., Hirotsu, K.
Deposit date:1993-08-02
Release date:1994-08-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic study of pyridoxal 5'-phosphate-type aspartate aminotransferases from Escherichia coli in open and closed form.
J.Biochem.(Tokyo), 116, 1994
1AY4
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AROMATIC AMINO ACID AMINOTRANSFERASE WITHOUT SUBSTRATE
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1AY5
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AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH MALEATE
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, MALEIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1AY8
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AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH 3-PHENYLPROPIONATE
Descriptor:AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, HYDROCINNAMIC ACID
Authors:Okamoto, A., Hirotsu, K., Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
2YSK
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN TTHA1432 FROM THERMUS THERMOPHILUS
Descriptor:Hypothetical protein TTHA1432, SULFATE ION
Authors:Okamoto, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus
To be Published
1CZC
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ASPARTATE AMINOTRANSFERASE MUTANT ATB17/139S/142N WITH GLUTARIC ACID
Descriptor:PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE, GLUTARIC ACID
Authors:Okamoto, A., Oue, S., Yano, T., Kagamiyama, H.
Deposit date:1999-09-02
Release date:2000-02-28
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cocrystallization of a mutant aspartate aminotransferase with a C5-dicarboxylic substrate analog: structural comparison with the enzyme-C4-dicarboxylic analog complex.
J.Biochem.(Tokyo), 127, 2000
1CZE
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ASPARTATE AMINOTRANSFERASE MUTANT ATB17/139S/142N WITH SUCCINIC ACID
Descriptor:ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, SUCCINIC ACID
Authors:Okamoto, A., Oue, S., Yano, T., Kagamiyama, H.
Deposit date:1999-09-02
Release date:2000-02-28
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cocrystallization of a mutant aspartate aminotransferase with a C5-dicarboxylic substrate analog: structural comparison with the enzyme-C4-dicarboxylic analog complex.
J.Biochem.(Tokyo), 127, 2000
3A2B
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CRYSTAL STRUCTURE OF SERINE PALMITOYLTRANSFERASE FROM SPHINGOBACTERIUM MULTIVORUM WITH SUBSTRATE L-SERINE
Descriptor:Serine palmitoyltransferase, SERINE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A., Hoseki, J.
Deposit date:2009-05-09
Release date:2009-07-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum
J.Biochem., 146, 2009
1VDH
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STRUCTURE-BASED FUNCTIONAL IDENTIFICATION OF A NOVEL HEME-BINDING PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:muconolactone isomerase-like protein
Authors:Ebihara, A., Okamoto, A., Kousumi, Y., Yamamoto, H., Masui, R., Ueyama, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-22
Release date:2004-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.
J.STRUCT.FUNCT.GENOM., 6, 2005
1VGG
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CRYSTAL STRUCTURE OF THE CONSERVED HYPOTHETICAL PROTEIN TTHA1091 FROM THERMUS THERMOPHILUS HB8
Descriptor:Conserved Hypothetical Protein TT1634 (TTHA1091)
Authors:Satoh, S., Yao, M., Kousumi, Y., Ebihara, A., Matsumoto, K., Okamoto, A., Tanaka, I., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-04-26
Release date:2004-10-26
Last modified:2014-07-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Conserved Hypothetical Protein TT1634 from Thermus Thermophilus HB8
To be Published
3K8U
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CRYSTAL STRUCTURE OF THE PEPTIDASE DOMAIN OF STREPTOCOCCUS COMA, A BI-FUNCTIONAL ABC TRANSPORTER INVOLVED IN QUORUM SENSING PATHWAY
Descriptor:Putative ABC transporter, ATP-binding protein ComA
Authors:Ishii, S., Yano, T., Ebihara, A., Okamoto, A., Manzoku, M., Hayashi, H.
Deposit date:2009-10-14
Release date:2010-02-23
Last modified:2014-02-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the peptidase domain of Streptococcus ComA, a bifunctional ATP-binding cassette transporter involved in the quorum-sensing pathway
J.Biol.Chem., 285, 2010
1UI0
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Uracil-DNA Glycosylase, SULFATE ION, IRON/SULFUR CLUSTER, ...
Authors:Hoseki, J., Okamoto, A., Masui, R., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2003-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8
J.Mol.Biol., 333, 2003
1UI1
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Uracil-DNA Glycosylase, IRON/SULFUR CLUSTER
Authors:Hoseki, J., Okamoto, A., Masui, R., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2003-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8
J.Mol.Biol., 333, 2003
1YOO
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ASPARTATE AMINOTRANSFERASE MUTANT ATB17 WITH ISOVALERIC ACID
Descriptor:ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, ISOVALERIC ACID
Authors:Oue, S., Okamoto, A., Yano, T., Kagamiyama, H.
Deposit date:1998-06-26
Release date:1999-02-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Redesigning the substrate specificity of an enzyme by cumulative effects of the mutations of non-active site residues.
J.Biol.Chem., 274, 1999
2ATE
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STRUCTURE OF THE COMPLEX OF PURE WITH NITROAIR
Descriptor:Phosphoribosylaminoimidazole carboxylase catalytic subunit, ((2R,3S,4R,5R)-5-(5-AMINO-4-NITRO-1H-IMIDAZOL-1-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL)METHYL DIHYDROGEN PHOSPHATE
Authors:Kappock, T.J., Mathews, I.I., Zaugg, J.B., Peng, P., Hoskins, A.A., Okamoto, A., Ealick, S.E., Stubbe, J.
Deposit date:2005-08-24
Release date:2006-08-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:N5-CAIR mutase: role of a CO2 binding site and substrate movement in catalysis.
Biochemistry, 46, 2007
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