Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5D39
DownloadVisualize
BU of 5d39 by Molmil
Transcription factor-DNA complex
Descriptor: DNA (5'-D(P*AP*TP*GP*GP*AP*TP*TP*TP*CP*CP*TP*GP*GP*AP*AP*GP*AP*CP*AP*GP*A)-3'), DNA (5'-D(P*TP*CP*TP*GP*TP*CP*TP*TP*CP*CP*AP*GP*GP*AP*AP*AP*TP*CP*CP*AP*T)-3'), Signal transducer and activator of transcription 6
Authors:Li, J, Niu, F, Ouyang, S, Liu, Z.
Deposit date:2015-08-06
Release date:2016-08-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for DNA recognition by STAT6
Proc.Natl.Acad.Sci.USA, 113, 2016
8I23
DownloadVisualize
BU of 8i23 by Molmil
Clostridium thermocellum RNA polymerase transcription open complex with SigI1 and its promoter
Descriptor: DNA (80-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Li, J, Zhang, H, Li, D, Feng, Y, Zhu, P.
Deposit date:2023-01-13
Release date:2023-10-11
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structure of the transcription open complex of distinct sigma I factors.
Nat Commun, 14, 2023
8I24
DownloadVisualize
BU of 8i24 by Molmil
Clostridium thermocellum RNA polymerase transcription open complex with SigI6 and its promoter
Descriptor: DNA (80-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Li, J, Zhang, H, Li, D, Feng, Y, Zhu, P.
Deposit date:2023-01-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure of the transcription open complex of distinct sigma I factors.
Nat Commun, 14, 2023
6L8W
DownloadVisualize
BU of 6l8w by Molmil
Crystal structure of ugt transferase mutant2
Descriptor: Glycosyltransferase
Authors:Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
Deposit date:2019-11-07
Release date:2020-04-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 2020
6L90
DownloadVisualize
BU of 6l90 by Molmil
Crystal structure of ugt transferase enzyme
Descriptor: Glycosyltransferase, SULFATE ION
Authors:Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
Deposit date:2019-11-07
Release date:2020-04-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 2020
6L8X
DownloadVisualize
BU of 6l8x by Molmil
Crystal structure of Siraitia grosvenorii ugt transferase mutant2
Descriptor: Glycosyltransferase
Authors:Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
Deposit date:2019-11-07
Release date:2020-04-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 10, 2020
5XR9
DownloadVisualize
BU of 5xr9 by Molmil
Crystal structure of Human Hsp90 with FS6
Descriptor: Heat shock protein HSP 90-alpha, N-[3-[5-bromanyl-2,4-bis(oxidanyl)phenyl]-4-(4-methoxyphenyl)-1,2-oxazol-5-yl]ethanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-08
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Crystal structure of Human Hsp90 with FS6
To Be Published
5XRE
DownloadVisualize
BU of 5xre by Molmil
Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor JX1
Descriptor: Heat shock protein HSP 90-alpha, N-[4-(4-methoxyphenyl)-3-[5-(8-methylquinolin-5-yl)-2,4-bis(oxidanyl)phenyl]-1,2-oxazol-5-yl]ethanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-08
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor JX1
To Be Published
5XQE
DownloadVisualize
BU of 5xqe by Molmil
Crystal structure of Human Hsp90 with FS3
Descriptor: Heat shock protein HSP 90-alpha, N-[3-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-4-(4-methoxyphenyl)-1,2-oxazol-5-yl]-2-methyl-propanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Crystal structure of Human Hsp90 with FS3
To Be Published
5XRD
DownloadVisualize
BU of 5xrd by Molmil
Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor FS7
Descriptor: Heat shock protein HSP 90-alpha, N-{3-[2,4-dihydroxy-5-(propan-2-yl)phenyl]-4-(4-methoxyphenyl)-1H-pyrazol-5-yl}acetamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-08
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor FS7
To Be Published
5XQD
DownloadVisualize
BU of 5xqd by Molmil
Crystal structure of Human Hsp90 with FS2
Descriptor: Heat shock protein HSP 90-alpha, N-[3-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-4-(4-methoxyphenyl)-1,2-oxazol-5-yl]propanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Human Hsp90 with FS2
To Be Published
5XR5
DownloadVisualize
BU of 5xr5 by Molmil
Crystal structure of Human Hsp90 with FS4
Descriptor: Heat shock protein HSP 90-alpha, N-[3-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-4-(4-methoxyphenyl)-1,2-oxazol-5-yl]-2,2-dimethyl-propanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Human Hsp90 with FS4
To Be Published
5XRB
DownloadVisualize
BU of 5xrb by Molmil
Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor FJ5
Descriptor: Heat shock protein HSP 90-alpha, N-[3-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-4-(4-methoxyphenyl)-1,2-oxazol-5-yl]cyclopropanecarboxamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-08
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor FJ5
To Be Published
4Y7K
DownloadVisualize
BU of 4y7k by Molmil
Structure of an archaeal mechanosensitive channel in closed state
Descriptor: Large conductance mechanosensitive channel protein,Riboflavin synthase
Authors:Li, J, Liu, Z.
Deposit date:2015-02-15
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Mechanical coupling of the multiple structural elements of the large-conductance mechanosensitive channel during expansion
Proc.Natl.Acad.Sci.USA, 112, 2015
4Y7J
DownloadVisualize
BU of 4y7j by Molmil
Structure of an archaeal mechanosensitive channel in expanded state
Descriptor: Large conductance mechanosensitive channel protein,Riboflavin synthase, nonyl beta-D-glucopyranoside
Authors:Li, J, Liu, Z.
Deposit date:2015-02-15
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Mechanical coupling of the multiple structural elements of the large-conductance mechanosensitive channel during expansion
Proc.Natl.Acad.Sci.USA, 112, 2015
7F04
DownloadVisualize
BU of 7f04 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with Heme and ATP.
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, ADENOSINE-5'-TRIPHOSPHATE, Cytochrome c biogenesis ATP-binding export protein CcmA, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
4BZ1
DownloadVisualize
BU of 4bz1 by Molmil
Structure of dengue virus EDIII in complex with Fab 3e31
Descriptor: CHLORIDE ION, ENVELOPE PROTEIN, FAB 3E31 HEAVY CHAIN, ...
Authors:Li, J, Watterson, D, Chang, C.W, Li, X.Q, Ericsson, D.J, Qiu, L.W, Cai, J.P, Chen, J, Fry, S.R, Cooper, M.A, Che, X.Y, Young, P.R, Kobe, B.
Deposit date:2013-07-23
Release date:2014-08-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of Dengue Virus Ediii in Complex with Fab 3E31
To be Published
4BZ2
DownloadVisualize
BU of 4bz2 by Molmil
Structure of dengue virus EDIII in complex with Fab 2D73
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ENVELOPE PROTEIN, ...
Authors:Li, J, Watterson, D, Chang, C.W, Li, X.Q, Ericsson, D.J, Qiu, L.W, Cai, J.P, Chen, J, Fry, S.R, Cooper, M.A, Che, X.Y, Young, P.R, Kobe, B.
Deposit date:2013-07-23
Release date:2014-08-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structure of Dengue Virus Ediii in Complex with Fab 2D73
To be Published
7FIX
DownloadVisualize
BU of 7fix by Molmil
Cryo-EM structure of cyanobacterial photosystem I in the presence of ferredoxin and cytochrome c6
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, CALCIUM ION, ...
Authors:Li, J, Kurisu, G.
Deposit date:2021-08-01
Release date:2022-09-21
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (1.97 Å)
Cite:Structure of cyanobacterial photosystem I complexed with ferredoxin at 1.97 angstrom resolution.
Commun Biol, 5, 2022
3R93
DownloadVisualize
BU of 3r93 by Molmil
Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
Descriptor: H3K9Me3 peptide, M-phase phosphoprotein 8, UNKNOWN ATOM OR ION
Authors:Li, J, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
Deposit date:2011-03-24
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.057 Å)
Cite:Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
7F03
DownloadVisualize
BU of 7f03 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with ANP
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
7F02
DownloadVisualize
BU of 7f02 by Molmil
Cytochrome c-type biogenesis protein CcmABCD from E. coli
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein B, ...
Authors:Li, J, Zheng, W, Gu, M, Zhang, K, Zhu, J.P.
Deposit date:2021-06-03
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structures of the CcmABCD heme release complex at multiple states.
Nat Commun, 13, 2022
6LBM
DownloadVisualize
BU of 6lbm by Molmil
Crystal Structure of FOXC2-DBD bound to a palindromic DNA sequence
Descriptor: Forkhead box protein C2, IRE0, MAGNESIUM ION
Authors:Li, J, Dai, S.Y.
Deposit date:2019-11-14
Release date:2021-02-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Mechanism of forkhead transcription factors binding to a novel palindromic DNA site.
Nucleic Acids Res., 49, 2021
6LBI
DownloadVisualize
BU of 6lbi by Molmil
Crystal Structure of FOXO1-DBD homodimer bound to a palindromic DNA sequence
Descriptor: Forkhead box protein O1, IRE0
Authors:Li, J, Dai, S.Y, Chen, Y.H.
Deposit date:2019-11-14
Release date:2021-02-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.067 Å)
Cite:Mechanism of forkhead transcription factors binding to a novel palindromic DNA site.
Nucleic Acids Res., 49, 2021
6M3Q
DownloadVisualize
BU of 6m3q by Molmil
Crystal structure of AnkB/beta4-spectrin complex
Descriptor: Ankyrin-2, Spectrin beta chain
Authors:Li, J, Chen, K, Zhu, R, Zhang, M.
Deposit date:2020-03-04
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.436 Å)
Cite:Structural Basis Underlying Strong Interactions between Ankyrins and Spectrins.
J.Mol.Biol., 432, 2020

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon