Author results

5ZUI
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CRYSTAL STRUCTURE OF HSP104 FROM CHAETOMIUM THERMOPHILUM
Descriptor:Heat Shock Protein 104, ADENOSINE-5'-DIPHOSPHATE, SULFATE ION
Authors:Hanazono, Y., Inoue, Y., Noguchi, K., Yohda, M., Shinohara, K., Takeda, K., Miki, K.
Deposit date:2018-05-07
Release date:2019-06-19
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Transient splitting of the Hsp104 hexameric ring revealed by near atomic analysis and direct visual observation
To Be Published
1EE8
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CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:MUTM (FPG) PROTEIN, ZINC ION
Authors:Sugahara, M., Mikawa, T., Kumasaka, T., Yamamoto, M., Kato, R., Fukuyama, K., Inoue, Y., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-01-31
Release date:2001-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.
EMBO J., 19, 2000
3VW6
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CRYSTAL STRUCTURE OF HUMAN APOPTOSIS SIGNAL-REGULATING KINASE 1 (ASK1) WITH IMIDAZOPYRIDINE INHIBITOR
Descriptor:Mitogen-activated protein kinase kinase kinase 5, 4-tert-butyl-N-[6-(1H-imidazol-1-yl)imidazo[1,2-a]pyridin-2-yl]benzamide
Authors:Terao, Y., Suzuki, H., Yoshikawa, M., Yashiro, H., Takekawa, S., Fujitani, Y., Okada, K., Inoue, Y., Yamamoto, Y., Nakagawa, H., Yao, S., Kawamoto, T., Uchikawa, O.
Deposit date:2012-08-06
Release date:2012-10-31
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and biological evaluation of imidazo[1,2-a]pyridines as novel and potent ASK1 inhibitors.
Bioorg. Med. Chem. Lett., 22, 2012
1AB9
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CRYSTAL STRUCTURE OF BOVINE GAMMA-CHYMOTRYPSIN
Descriptor:GAMMA-CHYMOTRYPSIN, PENTAPEPTIDE (TPGVY), SULFATE ION
Authors:Sugio, S., Kashima, A., Inoue, Y., Maeda, I., Nose, T., Shimohigashi, Y.
Deposit date:1997-02-05
Release date:1997-08-20
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystal structure of a dipeptide-chymotrypsin complex in an inhibitory interaction.
Eur.J.Biochem., 255, 1998
1AFQ
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CRYSTAL STRUCTURE OF BOVINE GAMMA-CHYMOTRYPSIN COMPLEXED WITH A SYNTHETIC INHIBITOR
Descriptor:BOVINE GAMMA-CHYMOTRYPSIN, D-leucyl-N-(4-fluorobenzyl)-L-phenylalaninamide, SULFATE ION
Authors:Sugio, S., Kashima, A., Inoue, Y., Maeda, I., Nose, T., Shimohigashi, Y.
Deposit date:1997-03-12
Release date:1997-09-17
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of a dipeptide-chymotrypsin complex in an inhibitory interaction.
Eur.J.Biochem., 255, 1998
1WOT
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STRUCTURE OF PUTATIVE MINIMAL NUCLEOTIDYLTRANSFERASE
Descriptor:PUTATIVE MINIMAL NUCLEOTIDYLTRANSFERASE
Authors:Suzuki, S., Hatanaka, H., Hondoh, T., Okumura, A., Kuroda, Y., Kuramitsu, S., Shibata, T., Inoue, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-08-25
Release date:2004-09-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of Putative Minimal Nucleotidyltransferase
To be Published
1GD7
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CRYSTAL STRUCTURE OF A BIFUNCTIONAL PROTEIN (CSAA) WITH EXPORT-RELATED CHAPERONE AND TRNA-BINDING ACTIVITIES.
Descriptor:CSAA PROTEIN
Authors:Shibata, T., Inoue, Y., Vassylyev, D.G., Kawaguchi, S., Yokoyama, S., Muller, J., Linde, D., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-09-22
Release date:2001-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.
EMBO J., 20, 2001
1IPA
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CRYSTAL STRUCTURE OF RNA 2'-O RIBOSE METHYLTRANSFERASE
Descriptor:RNA 2'-O-RIBOSE METHYLTRANSFERASE
Authors:Nureki, O., Shirouzu, M., Hashimoto, K., Ishitani, R., Terada, T., Tamakoshi, M., Oshima, T., Chijimatsu, M., Takio, K., Vassylyev, D.G., Shibata, T., Inoue, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-05-02
Release date:2002-07-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An enzyme with a deep trefoil knot for the active-site architecture.
Acta Crystallogr.,Sect.D, 58, 2002
1IQR
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CRYSTAL STRUCTURE OF DNA PHOTOLYASE FROM THERMUS THERMOPHILUS
Descriptor:photolyase, PHOSPHATE ION, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Komori, H., Masui, R., Kuramitsu, S., Yokoyama, S., Shibata, T., Inoue, Y., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-07-27
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IQU
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CRYSTAL STRUCTURE OF PHOTOLYASE-THYMINE COMPLEX
Descriptor:photolyase, PHOSPHATE ION, THYMINE, ...
Authors:Komori, H., Masui, R., Kuramitsu, S., Yokoyama, S., Shibata, T., Inoue, Y., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-08-03
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1J1H
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SOLUTION STRUCTURE OF A TMRNA-BINDING PROTEIN, SMPB, FROM THERMUS THERMOPHILUS
Descriptor:Small Protein B
Authors:Someya, T., Nameki, N., Hosoi, H., Suzuki, S., Hatanaka, H., Fujii, M., Terada, T., Shirouzu, M., Inoue, Y., Shibata, T., Kuramitsu, S., Yokoyama, S., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-04
Release date:2003-02-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus
FEBS Lett., 535, 2003
1UI0
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Uracil-DNA Glycosylase, SULFATE ION, IRON/SULFUR CLUSTER, ...
Authors:Hoseki, J., Okamoto, A., Masui, R., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2003-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8
J.Mol.Biol., 333, 2003
1UI1
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Uracil-DNA Glycosylase, IRON/SULFUR CLUSTER
Authors:Hoseki, J., Okamoto, A., Masui, R., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2003-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8
J.Mol.Biol., 333, 2003
1V8I
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE
Descriptor:ADP-ribose pyrophosphatase
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-09
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8L
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STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE COMPLEXED WITH ADP-RIBOSE
Descriptor:ADP-ribose pyrophosphatase, ADENOSINE-5-DIPHOSPHORIBOSE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-10
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8M
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CRYSTAL STRUCTURE ANALYSIS OF ADP-RIBOSE PYROPHOSPHATASE COMPLEXED WITH ADP-RIBOSE AND GD
Descriptor:ADP-ribose pyrophosphatase, ADENOSINE-5-DIPHOSPHORIBOSE, GADOLINIUM ATOM
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-12
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8N
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE COMPLEXED WITH ZN
Descriptor:ADP-ribose pyrophosphatase, ZINC ION
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-12
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8R
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE COMPLEXED WITH ADP-RIBOSE AND ZN
Descriptor:ADP-ribose pyrophosphatase, ZINC ION, ADENOSINE-5-DIPHOSPHORIBOSE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-14
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8S
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CRYSTAL STRUCTURE ANALUSIS OF THE ADP-RIBOSE PYROPHOSPHATASE COMPLEXED WITH AMP AND MG
Descriptor:ADP-ribose pyrophosphatase, MAGNESIUM ION, ADENOSINE MONOPHOSPHATE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-14
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8T
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE COMPLEXED WITH RIBOSE-5'-PHOSPHATE AND ZN
Descriptor:ADP-ribose pyrophosphatase, RIBOSE-5-PHOSPHATE, ZINC ION
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-14
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8U
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E82Q MUTANT WITH SO4 AND MG
Descriptor:ADP-ribose pyrophosphatase, MAGNESIUM ION, SULFATE ION
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8V
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E86Q MUTANT, COMPLEXED WITH ADP-RIBOSE AND MG
Descriptor:ADP-ribose pyrophosphatase, MAGNESIUM ION, ADENOSINE-5-DIPHOSPHORIBOSE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8W
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E82Q MUTANT, COMPLEXED WITH SO4 AND ZN
Descriptor:ADP-ribose pyrophosphatase, SULFATE ION, ZINC ION
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1V8Y
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E86Q MUTANT, COMPLEXED WITH ADP-RIBOSE AND ZN
Descriptor:ADP-ribose pyrophosphatase, ZINC ION, ADENOSINE-5-DIPHOSPHORIBOSE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
2EHD
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CRYSTAL STRUCTURE ANALYSIS OF OXIDOREDUCTASE
Descriptor:Oxidoreductase, short-chain dehydrogenase/reductase family, COBALT (II) ION
Authors:Kamiya, N., Hikima, T., Ebihara, A., Inoue, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-06
Release date:2008-03-11
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure analysis of putative oxidoreductase from Thermus thermophilus HB8
to be published
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