Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7NVS
DownloadVisualize
BU of 7nvs by Molmil
RNA polymerase II core pre-initiation complex with closed promoter DNA in proximal position
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVV
DownloadVisualize
BU of 7nvv by Molmil
XPB-containing part of TFIIH in a post-translocated state (with ADP-BeF3)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, General transcription and DNA repair factor IIH helicase subunit XPB, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVY
DownloadVisualize
BU of 7nvy by Molmil
RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position
Descriptor: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7OG4
DownloadVisualize
BU of 7og4 by Molmil
Human mitochondrial ribosome in complex with P/E-tRNA
Descriptor: 12S mitochondrial rRNA, 16S mitochondrial rRNA, 28S ribosomal protein S10, ...
Authors:Aibara, S, Singh, V, Modelska, A, Amunts, A.
Deposit date:2021-05-06
Release date:2021-06-23
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of mitochondrial translation.
Elife, 9, 2020
4WPM
DownloadVisualize
BU of 4wpm by Molmil
Structure of the Chaetomium thermophilum Mex67:Mtr2 Complex
Descriptor: SULFATE ION, mRNA export protein
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-10-20
Release date:2015-07-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
4WP6
DownloadVisualize
BU of 4wp6 by Molmil
Structure of the Mex67 LRR domain from Chaetomium thermophilum
Descriptor: mRNA export protein
Authors:Aibara, S, Valkov, E, Lamers, M, Stewart, M.
Deposit date:2014-10-17
Release date:2015-07-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
4WWU
DownloadVisualize
BU of 4wwu by Molmil
Structure of Mex67:Mtr2
Descriptor: ZINC ION, mRNA export factor MEX67, mRNA transport regulator MTR2
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-12
Release date:2015-02-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Domain organization within the nuclear export factor Mex67:Mtr2 generates an extended mRNA binding surface.
Nucleic Acids Res., 43, 2015
4WP2
DownloadVisualize
BU of 4wp2 by Molmil
Chaetomium Mex67 UBA domain
Descriptor: Putative mRNA export protein
Authors:Aibara, S, Stewart, M.
Deposit date:2014-10-17
Release date:2015-07-15
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
4WYK
DownloadVisualize
BU of 4wyk by Molmil
Structure of the LRR and NTF2-like domains of NXF1 complexed with NXT1
Descriptor: NTF2-related export protein 1, Nuclear RNA export factor 1
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-17
Release date:2015-02-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The principal mRNA nuclear export factor NXF1:NXT1 forms a symmetric binding platform that facilitates export of retroviral CTE-RNA.
Nucleic Acids Res., 43, 2015
4WP5
DownloadVisualize
BU of 4wp5 by Molmil
Chaetomium thermophilum Mex67 NTF2-like domain complexed with Mtr2
Descriptor: Mtr2, mRNA export protein
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-10-17
Release date:2015-07-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
4X2M
DownloadVisualize
BU of 4x2m by Molmil
Structure of Mtr2
Descriptor: Mtr2
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-26
Release date:2015-07-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
4XM4
DownloadVisualize
BU of 4xm4 by Molmil
Structure of Chaetomium Mex67:Mtr2 subunits
Descriptor: Mex67
Authors:Aibara, S, Valkov, M, Stewart, M.
Deposit date:2015-01-14
Release date:2015-07-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
7OZN
DownloadVisualize
BU of 7ozn by Molmil
RNA Polymerase II dimer (Class 1)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Aibara, S, Dienemann, C, Cramer, P.
Deposit date:2021-06-28
Release date:2021-10-06
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of an inactive RNA polymerase II dimer.
Nucleic Acids Res., 49, 2021
7OZP
DownloadVisualize
BU of 7ozp by Molmil
RNA Polymerase II dimer (Class 3)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Aibara, S, Dienemann, C, Cramer, P.
Deposit date:2021-06-28
Release date:2021-10-06
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of an inactive RNA polymerase II dimer.
Nucleic Acids Res., 49, 2021
7OZO
DownloadVisualize
BU of 7ozo by Molmil
RNA Polymerase II dimer (Class 2)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Aibara, S, Dienemann, C, Cramer, P.
Deposit date:2021-06-28
Release date:2021-10-06
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of an inactive RNA polymerase II dimer.
Nucleic Acids Res., 49, 2021
7NVT
DownloadVisualize
BU of 7nvt by Molmil
RNA polymerase II core pre-initiation complex with closed promoter DNA in distal position
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVU
DownloadVisualize
BU of 7nvu by Molmil
RNA polymerase II core pre-initiation complex with open promoter DNA
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVX
DownloadVisualize
BU of 7nvx by Molmil
TFIIH in a post-translocated state (with ADP-BeF3)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, CDK-activating kinase assembly factor MAT1, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NW0
DownloadVisualize
BU of 7nw0 by Molmil
RNA polymerase II pre-initiation complex with open promoter DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, CDK-activating kinase assembly factor MAT1, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVW
DownloadVisualize
BU of 7nvw by Molmil
TFIIH in a pre-translocated state (without ADP-BeF3)
Descriptor: CDK-activating kinase assembly factor MAT1, General transcription and DNA repair factor IIH helicase subunit XPB, General transcription factor IIE subunit 1, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVZ
DownloadVisualize
BU of 7nvz by Molmil
RNA polymerase II pre-initiation complex with closed promoter DNA in distal position
Descriptor: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Aibara, S, Schilbach, S, Cramer, P.
Deposit date:2021-03-16
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
1PMS
DownloadVisualize
BU of 1pms by Molmil
PLECKSTRIN HOMOLOGY DOMAIN OF SON OF SEVENLESS 1 (SOS1) WITH GLYCINE-SERINE ADDED TO THE N-TERMINUS, NMR, 20 STRUCTURES
Descriptor: SOS 1
Authors:Koshiba, S, Kigawa, T, Kim, J, Shirouzu, M, Bowtell, D, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1997-02-18
Release date:1997-05-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the pleckstrin homology domain of mouse Son-of-sevenless 1 (mSos1).
J.Mol.Biol., 269, 1997
1INZ
DownloadVisualize
BU of 1inz by Molmil
SOLUTION STRUCTURE OF THE EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN OF HUMAN EPSIN
Descriptor: EPS15-INTERACTING PROTEIN(EPSIN)
Authors:Koshiba, S, Kigawa, T, Kikuchi, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-12-05
Release date:2001-05-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the epsin N-terminal homology (ENTH) domain of human epsin
J.STRUCT.FUNCT.GENOM., 2, 2001
1IQ3
DownloadVisualize
BU of 1iq3 by Molmil
SOLUTION STRUCTURE OF THE EPS15 HOMOLOGY DOMAIN OF A HUMAN POB1
Descriptor: CALCIUM ION, RALBP1-INTERACTING PROTEIN (PARTNER OF RALBP1)
Authors:Koshiba, S, Kigawa, T, Iwahara, J, Kikuchi, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-06-06
Release date:2001-06-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the Eps15 homology domain of a human POB1 (partner of RalBP1).
FEBS Lett., 442, 1999
5G5P
DownloadVisualize
BU of 5g5p by Molmil
Structure of the Saccharomyces cerevisiae TREX-2 complex
Descriptor: 26S PROTEASOME COMPLEX SUBUNIT SEM1, NUCLEAR MRNA EXPORT PROTEIN SAC3, NUCLEAR MRNA EXPORT PROTEIN THP1
Authors:Aibara, S, Bai, X.C, Stewart, M.
Deposit date:2016-05-26
Release date:2016-11-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:The Sac3 Tpr-Like Region in the Saccharomyces Cerevisiae Trex-2 Complex is More Extensive But Independent of the Cid Region
J.Struct.Biol., 195, 2016

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon