Author results

158D
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CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNA
分子名称:DNA (5'-D(*CP*CP*AP*AP*GP*CP*TP*TP*GP*G)-3'), CALCIUM ION
著者Grzeskowiak, K., Goodsell, D.S., Kaczor-Grzeskowiak, M., Cascio, D., Dickerson, R.E.
登録日1994-02-03
公開日1994-05-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA.
Biochemistry, 32, 1993
1D23
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THE STRUCTURE OF B-HELICAL C-G-A-T-C-G-A-T-C-G AND COMPARISON WITH C-C-A-A-C-G-T-T-G-G. THE EFFECT OF BASE PAIR REVERSALS
分子名称:DNA (5'-D(*CP*GP*AP*TP*CP*GP*AP*TP*CP*G)-3'), MAGNESIUM ION
著者Grzeskowiak, K., Yanagi, K., Prive, G.G., Dickerson, R.E.
登録日1991-05-29
公開日1991-10-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of B-helical C-G-A-T-C-G-A-T-C-G and comparison with C-C-A-A-C-G-T-T-G-G. The effect of base pair reversals.
J.Biol.Chem., 266, 1991
1RNL
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THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL
分子名称:NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL, PLATINUM (II) ION, GLYCEROL
著者Baikalov, I., Schroder, I., Kaczor-Grzeskowiak, M., Grzeskowiak, K., Gunsalus, R.P., Dickerson, R.E.
登録日1996-04-17
公開日1996-11-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Escherichia coli response regulator NarL.
Biochemistry, 35, 1996
1D49
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THE STRUCTURE OF A B-DNA DECAMER WITH A CENTRAL T-A STEP: C-G-A-T-T-A-A-T-C-G
分子名称:DNA (5'-D(*CP*GP*AP*TP*TP*AP*AP*TP*CP*G)-3'), MAGNESIUM ION
著者Quintana, J.R., Grzeskowiak, K., Yanagi, K., Dickerson, R.E.
登録日1991-09-17
公開日1992-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a B-DNA decamer with a central T-A step: C-G-A-T-T-A-A-T-C-G.
J.Mol.Biol., 225, 1992
1DA3
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THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURN
分子名称:DNA (5'-D(*CP*GP*AP*TP*CP*GP*(6MA)P*TP*CP*G)-3'), CHLORIDE ION, MAGNESIUM ION
著者Baikalov, I., Grzeskowiak, K., Yanagi, K., Quintana, J., Dickerson, R.E.
登録日1992-11-09
公開日1993-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the trigonal decamer C-G-A-T-C-G-6meA-T-C-G: a B-DNA helix with 10.6 base-pairs per turn.
J.Mol.Biol., 231, 1993
1D16
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STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS
分子名称:DNA (5'-D(*CP*GP*CP*GP*CP*GP*TP*TP*TP*TP*CP*GP*CP*GP*CP*G)-3')
著者Chattopadhyaya, R., Grzeskowiak, K., Dickerson, R.E.
登録日1988-04-12
公開日1989-01-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a T4 hairpin loop on a Z-DNA stem and comparison with A-RNA and B-DNA loops.
J.Mol.Biol., 211, 1990
2IE1
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POLYAMINES STABILIZE LEFT-HANDED Z-DNA. WE FOUND NEW TYPE OF POLYAMINE WHICH STABILIZE LEFT-HANDED Z-DNA BY X-RAY CRYSTALLOGRAPHY
分子名称:DNA (5'-D(*DCP*DGP*DCP*DGP*DCP*DG)-3'), N-(2-AMINOETHYL)-N'-{2-[(2-AMINOETHYL)AMINO]ETHYL}ETHANE-1,2-DIAMINE
著者Ohishi, H., Odoko, M., Tsukamoto, K., Hiyama, Y., Maezaki, N., Grzeskowiak, K., Ishida, T., Tanaka, T., Okabe, N., Fukuyama, K.
登録日2006-09-16
公開日2007-10-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Polyamines stabilize left-handed Z-DNA. We found new type of polyamine which stabilize left-handed Z-DNA by X-ray crystallography
To be Published
8BNA
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BINDING OF HOECHST 33258 TO THE MINOR GROOVE OF B-DNA
分子名称:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, MAGNESIUM ION
著者Pjura, P.E., Grzeskowiak, K., Dickerson, R.E.
登録日1986-08-29
公開日1987-01-15
最終更新日2014-07-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Binding of Hoechst 33258 to the minor groove of B-DNA.
J.Mol.Biol., 197, 1987
196D
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CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION
分子名称:DNA (5'-D(*CP*TP*CP*TP*CP*GP*AP*GP*AP*G)-3'), CALCIUM ION
著者Goodsell, D.S., Grzeskowiak, K., Dickerson, R.E.
登録日1994-11-07
公開日1995-02-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction.
Biochemistry, 34, 1995
1D30
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THE STRUCTURE OF DAPI BOUND TO DNA
分子名称:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE
著者Larsen, T., Goodsell, D.S., Cascio, D., Grzeskowiak, K., Dickerson, R.E.
登録日1991-01-04
公開日1992-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of DAPI bound to DNA.
J.Biomol.Struct.Dyn., 7, 1989
274D
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CRYSTAL STRUCTURE OF A COVALENT DNA-DRUG ADDUCT: ANTHRAMYCIN BOUND TO C-C-A-A-C-G-T-T-G-G, AND A MOLECULAR EXPLANATION OF SPECIFICITY
分子名称:DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*(DRUG)GP*G)-3'), ANTHRAMYCIN
著者Kopka, M.L., Goodsell, D.S., Baikalov, I., Grzeskowiak, K., Cascio, D., Dickerson, R.E.
登録日1994-04-28
公開日1994-10-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a covalent DNA-drug adduct: anthramycin bound to C-C-A-A-C-G-T-T-G-G and a molecular explanation of specificity.
Biochemistry, 33, 1994
307D
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STRUCTURE OF A DNA ANALOG OF THE PRIMER FOR HIV-1 RT SECOND STRAND SYNTHESIS
分子名称:DNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')
著者Han, G.W., Kopka, M.L., Cascio, D., Grzeskowiak, K., Dickerson, R.E.
登録日1997-01-07
公開日1997-01-27
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of a DNA analog of the primer for HIV-1 RT second strand synthesis.
J.Mol.Biol., 269, 1997
1ZG1
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NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
分子名称:5'-D(*CP*GP*TP*AP*CP*TP*CP*CP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*GP*GP*AP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, ...
著者Maris, A.E., Kaczor-Grzeskowiak, M., Ma, Z., Kopka, M.L., Gunsalus, R.P., Dickerson, R.E.
登録日2005-04-20
公開日2005-11-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZG5
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NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
分子名称:5'-D(*CP*GP*TP*AP*CP*CP*CP*CP*TP*AP*TP*AP*GP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, SULFATE ION
著者Maris, A.E., Kaczor-Grzeskowiak, M., Ma, Z., Kopka, M.L., Gunsalus, R.P., Dickerson, R.E.
登録日2005-04-20
公開日2005-11-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1A04
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THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM
分子名称:NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
著者Baikalov, I., Schroder, I., Kaczor-Grzeskowiak, M., Cascio, D., Gunsalus, R.P., Dickerson, R.E.
登録日1997-12-08
公開日1998-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献NarL dimerization? Suggestive evidence from a new crystal form
Biochemistry, 37, 1998
1D56
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ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-G
分子名称:DNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3'), CALCIUM ION
著者Yuan, H., Quintana, J., Dickerson, R.E.
登録日1992-02-19
公開日1992-09-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Alternative structures for alternating poly(dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G.
Biochemistry, 31, 1992
1D57
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ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-G
分子名称:DNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3'), MAGNESIUM ION
著者Yuan, H., Quintana, J., Dickerson, R.E.
登録日1992-02-19
公開日1992-09-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Alternative structures for alternating poly(dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G.
Biochemistry, 31, 1992
1D43
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DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE UP
分子名称:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE
著者Quintana, J.R., Lipanov, A.A., Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2011-08-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1D44
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DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE DOWN
分子名称:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE
著者Quintana, J.R., Lipanov, A.A., Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2011-08-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1D45
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DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-25 DEGREES C, PIPERAZINE DOWN
分子名称:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, MAGNESIUM ION
著者Quintana, J.R., Lipanov, A.A., Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2011-08-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1D46
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DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-100 DEGREES C, PIPERAZINE DOWN
分子名称:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE
著者Quintana, J.R., Lipanov, A.A., Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2011-08-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1SK5
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THE ULTRA-HIGH RESOLUTION STRUCTURE OF D(CTTTTAAAAG)2: MODULATION OF BENDING BY T-A STEPS AND ITS ROLE IN DNA RECOGNITION
分子名称:5'-D(*CP*TP*TP*TP*TP*AP*AP*AP*AP*G)-3', CALCIUM ION
著者Han, G.W., Langs, D., Kopka, M.L., Dickerson, R.E.
登録日2004-03-04
公開日2005-06-21
最終更新日2018-02-14
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
To be Published
252D
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CRYSTAL STRUCTURE OF THE B-DNA DECAMER D(CGCAATTGCG)2; SEQUENCE-DEPENDENT CROSSED HELIX PACKING
分子名称:DNA (5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3')
著者Wood, A.A., Nunn, C.M., Trent, J.O., Neidle, S.
登録日1996-03-07
公開日1996-04-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Sequence-dependent crossed helix packing in the crystal structure of a B-DNA decamer yields a detailed model for the Holliday junction.
J.Mol.Biol., 269, 1997