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3ELK
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BU of 3elk by Molmil
Crystal structure of putative transcriptional regulator TA0346 from Thermoplasma acidophilum
Descriptor: CHLORIDE ION, Putative transcriptional regulator TA0346
Authors:Grantz Saskova, K, Chruszcz, M, Evdokimova, E, Egorova, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-09-22
Release date:2008-09-30
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of putative transcriptional regulator TA0346 from Thermoplasma acidophilum
To be Published
4M8Y
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BU of 4m8y by Molmil
GS-8374, a Novel Phosphonate-Containing Inhibitor of HIV-1 Protease, Effectively Inhibits HIV PR Mutants with Amino Acid Insertions
Descriptor: DIETHYL ({4-[(2S,3R)-2-({[(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YLOXY]CARBONYL}AMINO)-3-HYDROXY-4-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}BUTYL]PHENOXY}METHYL)PHOSPHONATE, Protease
Authors:Grantz saskova, K, Brynda, J, Rezacova, P, Kozisek, M, Konvalinka, J.
Deposit date:2013-08-14
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:GS-8374, a prototype phosphonate-containing inhibitor of HIV-1 protease, effectively inhibits protease mutants with amino acid insertions.
J.Virol., 88, 2014
4M8X
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BU of 4m8x by Molmil
GS-8374, a Novel Phosphonate-Containing Inhibitor of HIV-1 Protease, Effectively Inhibits HIV PR Mutants with Amino Acid Insertions
Descriptor: DIETHYL ({4-[(2S,3R)-2-({[(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YLOXY]CARBONYL}AMINO)-3-HYDROXY-4-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}BUTYL]PHENOXY}METHYL)PHOSPHONATE, Protease
Authors:Grantz saskova, K, Brynda, J, Rezacova, P, Kozisek, M, Konvalinka, J.
Deposit date:2013-08-14
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:GS-8374, a prototype phosphonate-containing inhibitor of HIV-1 protease, effectively inhibits protease mutants with amino acid insertions.
J.Virol., 88, 2014
4LL3
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BU of 4ll3 by Molmil
Structure of wild-type HIV protease in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:Grantz Saskova, K, Rezacova, P, Brynda, J, Kozisek, M, Konvalinka, J.
Deposit date:2013-07-09
Release date:2014-04-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Thermodynamic and structural analysis of HIV protease resistance to darunavir - analysis of heavily mutated patient-derived HIV-1 proteases.
Febs J., 281, 2014
4RGH
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BU of 4rgh by Molmil
Human DNA Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering its Cellular Role
Descriptor: CHLORIDE ION, Protein DDI1 homolog 2
Authors:Brynda, J, Grantz Saskova, K.
Deposit date:2014-09-30
Release date:2016-02-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human DNA Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering its Cellular Role
To be Published
3TTP
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BU of 3ttp by Molmil
Structure of multiresistant HIV-1 protease in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Saskova, K.G, Brynda, J, Kozisek, M, Konvalinka, J, Rezacova, P.
Deposit date:2011-09-15
Release date:2012-09-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Thermodynamic and structural analysis of HIV protease resistance to darunavir - analysis of heavily mutated patient-derived HIV-1 proteases.
Febs J., 281, 2014
2N7E
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BU of 2n7e by Molmil
Solution structure of the UBL domain of yeast Ddi1
Descriptor: DNA damage-inducible protein 1
Authors:Siva, M, Grantz Saskova, K, Veverka, V.
Deposit date:2015-09-09
Release date:2016-07-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
2N7D
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BU of 2n7d by Molmil
Solution structure of the UBL domain of human Ddi2
Descriptor: Protein DDI1 homolog 2
Authors:Siva, M, Grantz Saskova, K, Veverka, V.
Deposit date:2015-09-08
Release date:2016-07-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.
Sci Rep, 6, 2016

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