Author results

3M48
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GCN4 LEUCINE ZIPPER PEPTIDE MUTANT
Descriptor:General control protein GCN4, SODIUM ION
Authors:Du, S., Kettering, R.D., Alvarado, J.J., Tortajada, A., Yeh, J.I.
Deposit date:2010-03-10
Release date:2011-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:GCN4 Leucine Zipper Peptide Mutant
To be Published
5Y92
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CRYSTAL STRUCTURE OF ANXUR2 EXTRACELLULAR DOMAIN FROM ARABIDOPSIS THALIANA
Descriptor:Receptor-like protein kinase ANXUR2, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Du, S., Xiao, J.Y.
Deposit date:2017-08-22
Release date:2018-02-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal structures of the extracellular domains of the CrRLK1L receptor-like kinases ANXUR1 and ANXUR2
Protein Sci., 27, 2018
5Y96
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CRYSTAL STRUCTURE OF ANXUR1 EXTRACELLULAR DOMAIN FROM ARABIDOPSIS THALIANA
Descriptor:Receptor-like protein kinase ANXUR1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Du, S., Xiao, J.Y.
Deposit date:2017-08-22
Release date:2018-02-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the extracellular domains of the CrRLK1L receptor-like kinases ANXUR1 and ANXUR2
Protein Sci., 27, 2018
7CH4
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CRYSTAL STRUCTURE OF THE SARS-COV-2 S RBD IN COMPLEX WITH BD-604 FAB
Descriptor:BD-604 Fab H, BD-604 Fab L, Spike glycoprotein
Authors:Du, S., Xiao, J.Y.
Deposit date:2020-07-05
Release date:2020-09-16
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of the SARS-CoV-2 S RBD in complex with BD-604 Fab
To Be Published
7CH5
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CRYSTAL STRUCTURE OF THE SARS-COV-2 S RBD IN COMPLEX WITH BD-629 FAB
Descriptor:BD-629 Fab H, BD-629 Fab L, Spike glycoprotein
Authors:Du, S., Xiao, J.Y.
Deposit date:2020-07-05
Release date:2020-09-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the SARS-CoV-2 S RBD in complex with BD-629 Fab
To Be Published
7CHC
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CRYSTAL STRUCTURE OF THE SARS-COV-2 S RBD IN COMPLEX WITH BD-629 FAB AND BD-368-2 FAB
Descriptor:BD-629 Fab H, IGK@ protein, Spike glycoprotein, ...
Authors:Du, S., Xiao, J.Y.
Deposit date:2020-07-05
Release date:2020-09-16
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structure of the SARS-CoV-2 S RBD in complex with BD-629 Fab and BD-368-2 Fab
To Be Published
6K1Z
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CRYSTAL STRUCTURE OF FARNESYLATED HGBP1
Descriptor:Guanylate-binding protein 1, FARNESYL
Authors:Du, S., Xiao, J.Y.
Deposit date:2019-05-13
Release date:2019-06-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Structural mechanism for guanylate-binding proteins (GBPs) targeting by the Shigella E3 ligase IpaH9.8.
Plos Pathog., 15, 2019
3PA0
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CRYSTAL STRUCTURE OF CHIRAL GAMMA-PNA WITH COMPLEMENTARY DNA STRAND: INSIGHT INTO THE STABILITY AND SPECIFICITY OF RECOGNITION AN CONFORMATIONAL PREORGANIZATION
Descriptor:DNA 5'-D(*AP*TP*CP*TP*GP*TP*GP*GP*TP*C)-3', PEPTIDE NUCLEIC ACID, 1,2-ETHANEDIOL, ...
Authors:Yeh, J.I., Shivachev, B., Du, S.
Deposit date:2010-10-18
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of chiral gammaPNA with complementary DNA strand: insights into the stability and specificity of recognition and conformational preorganization.
J.Am.Chem.Soc., 132, 2010
1M5W
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1.96 A CRYSTAL STRUCTURE OF PYRIDOXINE 5'-PHOSPHATE SYNTHASE IN COMPLEX WITH 1-DEOXY-D-XYLULOSE PHOSPHATE
Descriptor:Pyridoxal phosphate biosynthetic protein pdxJ, 1-DEOXY-D-XYLULOSE-5-PHOSPHATE, PHOSPHATE ION
Authors:Yeh, J.I., Du, S., Pohl, E., Cane, D.E.
Deposit date:2002-07-10
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Multistate Binding in Pyridoxine 5'-Phosphate Synthase: 1.96 A Crystal Structure in Complex with 1-deoxy-D-xylulose phosphate
Biochemistry, 41, 2002
2QCU
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CRYSTAL STRUCTURE OF GLYCEROL-3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI
Descriptor:Aerobic glycerol-3-phosphate dehydrogenase, octyl beta-D-glucopyranoside, SULFATE ION, ...
Authors:Yeh, J.I., Chinte, U., Du, S.
Deposit date:2007-06-19
Release date:2008-04-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2R45
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI GLYCEROL-3-PHOSPHATE DEHYDROGENASE IN COMPLEX WITH 2-PHOSPHO-D-GLYCERIC ACID
Descriptor:Aerobic glycerol-3-phosphate dehydrogenase, octyl beta-D-glucopyranoside, PHOSPHATE ION, ...
Authors:Yeh, J.I., Du, S., Chinte, U.
Deposit date:2007-08-30
Release date:2008-04-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism
Proc.Natl.Acad.Sci.USA, 105, 2008
2R46
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI GLYCEROL-3-PHOSPHATE DEHYDROGENASE IN COMPLEX WITH 2-PHOSPHOPYRUVIC ACID.
Descriptor:Aerobic glycerol-3-phosphate dehydrogenase, octyl beta-D-glucopyranoside, 1,2-ETHANEDIOL, ...
Authors:Yeh, J.I., Du, S., Chinte, U.
Deposit date:2007-08-30
Release date:2008-04-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism
Proc.Natl.Acad.Sci.USA, 105, 2008
2R4E
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI GLYCEROL-3-PHOSPHATE DEHYDROGENASE IN COMPLEX WITH DHAP
Descriptor:Aerobic glycerol-3-phosphate dehydrogenase, octyl beta-D-glucopyranoside, PHOSPHATE ION, ...
Authors:Yeh, J.I., Du, S., Chinte, U.
Deposit date:2007-08-31
Release date:2008-04-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2R4J
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI SEMET SUBSTITUTED GLYCEROL-3-PHOSPHATE DEHYDROGENASE IN COMPLEX WITH DHAP
Descriptor:Aerobic glycerol-3-phosphate dehydrogenase, octyl beta-D-glucopyranoside, PHOSPHATE ION, ...
Authors:Yeh, J.I., Du, S., Chinte, U.
Deposit date:2007-08-31
Release date:2008-06-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3MBU
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STRUCTURE OF A BIPYRIDINE-MODIFIED PNA DUPLEX
Descriptor:Bipyridine-PNA, 1,2-ETHANEDIOL, R-1,2-PROPANEDIOL, ...
Authors:Yeh, J.I., Pohl, E., Truan, D., He, W., Sheldrick, G.M., Du, S., Achim, C.
Deposit date:2010-03-26
Release date:2011-03-30
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:The crystal structure of non-modified and bipyridine-modified PNA duplexes.
Chemistry, 16, 2010
4E54
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DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR
Descriptor:DNA damage-binding protein 1, DNA damage-binding protein 2, AP24 DNA strand, ...
Authors:Yeh, J.I., Du, S.
Deposit date:2012-03-14
Release date:2012-08-08
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
4E5Z
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DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR
Descriptor:DNA damage-binding protein 1, DNA damage-binding protein 2, AP24 DNA strand, ...
Authors:Yeh, J.I., Du, S.
Deposit date:2012-03-15
Release date:2012-08-22
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
5GJ9
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CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA ACO2 IN COMPLEX WITH POA
Descriptor:1-aminocyclopropane-1-carboxylate oxidase 2, ZINC ION, PYRAZINE-2-CARBOXYLIC ACID
Authors:Sun, X.Z., Li, Y.X., He, W.R., Ji, C.G., Xia, P.X., Wang, Y.C., Du, S., Li, H.J., Raikhel, N., Xiao, J.Y., Guo, H.W.
Deposit date:2016-06-28
Release date:2017-05-10
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pyrazinamide and derivatives block ethylene biosynthesis by inhibiting ACC oxidase.
Nat Commun, 8, 2017
5GJA
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CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA ACO2 IN COMPLEX WITH 2-PA
Descriptor:1-aminocyclopropane-1-carboxylate oxidase 2, ZINC ION, PYRIDINE-2-CARBOXYLIC ACID
Authors:Sun, X.Z., Li, Y.X., He, W.R., Ji, C.G., Xia, P.X., Wang, Y.C., Du, S., Li, H.J., Raikhel, N., Xiao, J.Y., Guo, H.W.
Deposit date:2016-06-28
Release date:2017-05-10
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pyrazinamide and derivatives block ethylene biosynthesis by inhibiting ACC oxidase.
Nat Commun, 8, 2017
3NTE
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CRYSTAL STRUCTURE OF THE WILD-TYPE FULL-LENGTH HIV-1 CAPSID PROTEIN
Descriptor:HIV-1 capsid protein, IODIDE ION, Tri-iodode Anion, ...
Authors:Betts, L., Yeh, J.I.
Deposit date:2010-07-03
Release date:2010-12-01
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the HIV-1 full-length capsid protein in a conformationally trapped unassembled state induced by small-molecule binding.
J.Mol.Biol., 406, 2011
5TX4
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DERIVATIVE OF MOUSE TGF-BETA2, WITH A DELETION OF RESIDUES 52-71 AND K25R, R26K, L51R, A74K, C77S, L89V, I92V, K94R T95K, I98V SINGLE AMINO ACID SUBSTITUTIONS, BOUND TO HUMAN TGF-BETA TYPE II RECEPTOR ECTODOMAIN RESIDUES 15-130
Descriptor:TGF-beta receptor type-2, Transforming growth factor beta-2
Authors:Hinck, A.P., Kim, S.
Deposit date:2016-11-15
Release date:2017-03-01
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.876 Å)
Cite:An engineered transforming growth factor beta (TGF-beta ) monomer that functions as a dominant negative to block TGF-beta signaling.
J. Biol. Chem., 292, 2017
3MBS
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CRYSTAL STRUCTURE OF 8MER PNA
Descriptor:Peptide Nucleic Acid, 1,2-ETHANEDIOL
Authors:Yeh, J.I., Pohl, E., Truan, D., He, W., Sheldrick, G.M., Achim, C.
Deposit date:2010-03-26
Release date:2011-03-30
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:The crystal structure of non-modified and bipyridine-modified PNA duplexes.
Chemistry, 16, 2010
4Z3D
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HUMAN CARBONYL REDUCTASE 1 WITH GLUTATHIONE IN A PROTECTIVE CONFIGURATION
Descriptor:Carbonyl reductase [NADPH] 1, GLUTATHIONE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ding, Y., Liang, Q.
Deposit date:2015-03-31
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights on the catalytic site protection of human carbonyl reductase 1 by glutathione.
J.Struct.Biol., 192, 2015
5TX2
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MINIATURE TGF-BETA2 3-MUTANT MONOMER
Descriptor:Transforming growth factor beta-2
Authors:Taylor, A.B., Kim, S.K., Hart, P.J., Hinck, A.P.
Deposit date:2016-11-15
Release date:2017-03-01
Last modified:2017-05-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:An engineered transforming growth factor beta (TGF-beta ) monomer that functions as a dominant negative to block TGF-beta signaling.
J. Biol. Chem., 292, 2017
5TX6
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STRUCTURE OF TGF-BETA2 DERIVATIVE WITH DELETION OF RESIDUES 52-71 AND 10 SINGLE AMINO ACID MUTATIONS (MMTGF-BETA2-7M)
Descriptor:Transforming growth factor beta-2, CALCIUM ION
Authors:Petrunak, E.M., Hinck, A.P.
Deposit date:2016-11-15
Release date:2017-03-01
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.746 Å)
Cite:An engineered transforming growth factor beta (TGF-beta ) monomer that functions as a dominant negative to block TGF-beta signaling.
J. Biol. Chem., 292, 2017
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PDB entries from 2020-09-16