4V7E | | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | | Descriptor: | 18S ribosomal RNA, P-site tRNA, 5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3', ... | | Authors: | Barrio-Garcia, C., Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R. | | Deposit date: | 2013-11-22 | | Release date: | 2014-07-09 | | Last modified: | 2019-12-18 | | Method: | ELECTRON MICROSCOPY (5.5 Å) | | Cite: | Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Nature, 506, 2014
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3IZD | | MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF. | | Descriptor: | rRNA expansion segment ES27L in an "out" conformation | | Authors: | Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R. | | Deposit date: | 2010-10-13 | | Release date: | 2010-12-01 | | Last modified: | 2012-05-30 | | Method: | ELECTRON MICROSCOPY (8.6 Å) | | Cite: | Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
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4V6I | | LOCALIZATION OF THE SMALL SUBUNIT RIBOSOMAL PROTEINS INTO A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME | | Descriptor: | 40S ribosomal protein RACK1 (RACK1), 40S ribosomal protein rpS0 (S2p), 40S ribosomal protein rpS3 (S3p), ... | | Authors: | Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R. | | Deposit date: | 2010-10-12 | | Release date: | 2014-07-09 | | Last modified: | 2019-12-18 | | Method: | ELECTRON MICROSCOPY (8.8 Å) | | Cite: | Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
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2WVW | | CRYO-EM STRUCTURE OF THE RBCL-RBCX COMPLEX | | Descriptor: | RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN, RBCX PROTEIN | | Authors: | Liu, C., Young, A.L., Starling-Windhof, A., Bracher, A., Saschenbrecker, S., Rao, B.V., Rao, K.V., Berninghausen, O., Mielke, T., Hartl, F.U., Beckmann, R., Hayer-Hartl, M. | | Deposit date: | 2009-10-20 | | Release date: | 2010-01-19 | | Last modified: | 2019-10-23 | | Method: | ELECTRON MICROSCOPY (9 Å) | | Cite: | Coupled Chaperone Action in Folding and Assembly of Hexadecameric Rubisco
Nature, 463, 2010
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2WW9 | | CRYO-EM STRUCTURE OF THE ACTIVE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME | | Descriptor: | SEC SIXTY-ONE PROTEIN HOMOLOG, PROTEIN TRANSPORT PROTEIN SSS1, PROTEIN TRANSPORT PROTEIN SEB2, ... | | Authors: | Becker, T., Mandon, E., Bhushan, S., Jarasch, A., Armache, J.P., Funes, S., Jossinet, F., Gumbart, J., Mielke, T., Berninghausen, O., Schulten, K., Westhof, E., Gilmore, R., Beckmann, R. | | Deposit date: | 2009-10-22 | | Release date: | 2009-12-08 | | Last modified: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (8.6 Å) | | Cite: | Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
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2WWA | | CRYO-EM STRUCTURE OF IDLE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME | | Descriptor: | SEC SIXTY-ONE PROTEIN HOMOLOG, PROTEIN TRANSPORT PROTEIN SSS1, PROTEIN TRANSPORT PROTEIN SEB2, ... | | Authors: | Becker, T., Mandon, E., Bhushan, S., Jarasch, A., Armache, J.P., Funes, S., Jossinet, F., Gumbart, J., Mielke, T., Berninghausen, O., Schulten, K., Westhof, E., Gilmore, R., Beckmann, R. | | Deposit date: | 2009-10-22 | | Release date: | 2009-12-08 | | Last modified: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (8.9 Å) | | Cite: | Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
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2WWB | | CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME | | Descriptor: | PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA, ... | | Authors: | Becker, T., Mandon, E., Bhushan, S., Jarasch, A., Armache, J.P., Funes, S., Jossinet, F., Gumbart, J., Mielke, T., Berninghausen, O., Schulten, K., Westhof, E., Gilmore, R., Beckmann, R. | | Deposit date: | 2009-10-22 | | Release date: | 2009-12-08 | | Last modified: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (6.48 Å) | | Cite: | Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
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3IZQ | | STRUCTURE OF THE DOM34-HBS1-GDPNP COMPLEX BOUND TO A TRANSLATING RIBOSOME | | Descriptor: | Protein DOM34, Elongation factor 1 alpha-like protein | | Authors: | Becker, T., Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Sieber, H., Abdel Motaal, B., Mielke, T., Berninghausen, O., Beckmann, R. | | Deposit date: | 2010-11-30 | | Release date: | 2011-06-01 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (9.5 Å) | | Cite: | Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome.
Nat.Struct.Mol.Biol., 18, 2011
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3J15 | | MODEL OF RIBOSOME-BOUND ARCHAEAL PELOTA AND ABCE1 | | Descriptor: | Protein pelota, ABC transporter ATP-binding protein, ADENOSINE-5'-DIPHOSPHATE, ... | | Authors: | Becker, T., Franckenberg, S., Wickles, S., Shoemaker, C.J., Anger, A.M., Armache, J.-P., Sieber, H., Ungewickell, C., Berninghausen, O., Daberkow, I., Karcher, A., Thomm, M., Hopfner, K.-P., Green, R., Beckmann, R. | | Deposit date: | 2011-12-12 | | Release date: | 2012-02-22 | | Last modified: | 2018-08-22 | | Method: | ELECTRON MICROSCOPY (6.6 Å) | | Cite: | Structural basis of highly conserved ribosome recycling in eukaryotes and archaea.
Nature, 482, 2012
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3J16 | | MODELS OF RIBOSOME-BOUND DOM34P AND RLI1P AND THEIR RIBOSOMAL BINDING PARTNERS | | Descriptor: | Dom34p, Rli1p, 28S ribosomal RNA, ... | | Authors: | Becker, T., Franckenberg, S., Wickles, S., Shoemaker, C.J., Anger, A.M., Armache, J.-P., Sieber, H., Ungewickell, C., Berninghausen, O., Daberkow, I., Karcher, A., Thomm, M., Hopfner, K.-P., Green, R., Beckmann, R. | | Deposit date: | 2011-12-12 | | Release date: | 2012-02-22 | | Last modified: | 2012-05-30 | | Method: | ELECTRON MICROSCOPY (7.2 Å) | | Cite: | Structural basis of highly conserved ribosome recycling in eukaryotes and archaea.
Nature, 482, 2012
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3J25 | | STRUCTURAL BASIS FOR TETM-MEDIATED TETRACYCLINE RESISTANCE | | Descriptor: | Tetracycline resistance protein tetM, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | | Authors: | Doenhoefer, A., Franckenberg, S., Wickles, S., Berninghausen, O., Beckmann, R., Wilson, D.N. | | Deposit date: | 2012-08-22 | | Release date: | 2012-10-17 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (7.2 Å) | | Cite: | Structural basis for TetM-mediated tetracycline resistance.
Proc.Natl.Acad.Sci.USA, 109, 2012
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3J5L | | STRUCTURE OF THE E. COLI 50S SUBUNIT WITH ERMBL NASCENT CHAIN | | Descriptor: | 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, ... | | Authors: | Arenz, S., Ramu, H., Gupta, P., Berninghausen, O., Beckmann, R., Vazquez-Laslop, N., Mankin, A.S., Wilson, D.N. | | Deposit date: | 2013-10-23 | | Release date: | 2014-03-26 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (6.6 Å) | | Cite: | Molecular basis for erythromycin-dependent ribosome stalling during translation of the ErmBL leader peptide.
Nat Commun, 5, 2014
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3J7Z | | STRUCTURE OF THE E. COLI 50S SUBUNIT WITH ERMCL NASCENT CHAIN | | Descriptor: | 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, ... | | Authors: | Arenz, S., Meydan, S., Starosta, A.L., Berninghausen, O., Beckmann, R., Vazquez-Laslop, N., Wilson, D.N. | | Deposit date: | 2014-08-27 | | Release date: | 2014-10-22 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (3.9 Å) | | Cite: | Drug Sensing by the Ribosome Induces Translational Arrest via Active Site Perturbation.
Mol.Cell, 56, 2014
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3J9W | | CRYO-EM STRUCTURE OF THE BACILLUS SUBTILIS MIFM-STALLED RIBOSOME COMPLEX | | Descriptor: | 16S ribosomal RNA, 30S ribosomal protein uS2, 30S ribosomal protein uS3, ... | | Authors: | Sohmen, D., Chiba, S., Shimokawa-Chiba, N., Innis, C.A., Berninghausen, O., Beckmann, R., Ito, K., Wilson, D.N. | | Deposit date: | 2015-03-16 | | Release date: | 2015-04-29 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (3.9 Å) | | Cite: | Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling.
Nat Commun, 6, 2015
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3NR5 | | CRYSTAL STRUCTURE OF HUMAN MAF1 | | Descriptor: | Repressor of RNA polymerase III transcription MAF1 homolog | | Authors: | Ringel, R., Vannini, A., Kusser, A.G., Berninghausen, O., Kassavetis, G.A., Cramer, P. | | Deposit date: | 2010-06-30 | | Release date: | 2010-10-13 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.55 Å) | | Cite: | Molecular Basis of RNA Polymerase III Transcription Repression by Maf1
Cell(Cambridge,Mass.), 143, 2010
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3OC3 | | CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP | | Descriptor: | HELICASE MOT1, TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | | Authors: | Wollmann, P., Cui, S., Viswanathan, R., Berninghausen, O., Wells, M.N., Moldt, M., Witte, G., Butryn, A., Wendler, P., Beckmann, R., Auble, D.T., Hopfner, K.-P. | | Deposit date: | 2010-08-09 | | Release date: | 2011-07-13 | | Last modified: | 2011-07-27 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP.
Nature, 475, 2011
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4CG5 | | CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE 80S RIBOSOME TRANSLATING A SECRETORY SUBSTRATE | | Descriptor: | PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA | | Authors: | Gogala, M., Becker, T., Beatrix, B., Barrio-Garcia, C., Berninghausen, O., Beckmann, R. | | Deposit date: | 2013-11-21 | | Release date: | 2014-02-05 | | Last modified: | 2017-08-30 | | Method: | ELECTRON MICROSCOPY (7.4 Å) | | Cite: | Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
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4CG6 | | CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE 80S RIBOSOME TRANSLATING A MEMBRANE-INSERTING SUBSTRATE | | Descriptor: | PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA, ... | | Authors: | Gogala, M., Becker, T., Beatrix, B., Barrio-Garcia, C., Berninghausen, O., Beckmann, R. | | Deposit date: | 2013-11-21 | | Release date: | 2014-02-05 | | Last modified: | 2017-08-30 | | Method: | ELECTRON MICROSCOPY (7.8 Å) | | Cite: | Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
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4CG7 | | CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE IDLE 80S RIBOSOME | | Descriptor: | PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, TRANSPORT PROTEIN SEC61 SUBUNIT BETA | | Authors: | Gogala, M., Becker, T., Beatrix, B., Barrio-Garcia, C., Berninghausen, O., Beckmann, R. | | Deposit date: | 2013-11-21 | | Release date: | 2014-02-05 | | Last modified: | 2017-08-30 | | Method: | ELECTRON MICROSCOPY (6.9 Å) | | Cite: | Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
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4CRM | | CRYO-EM OF A PRE-RECYCLING COMPLEX WITH ERF1 AND ABCE1 | | Descriptor: | TRANSLATION INITIATION FACTOR RLI1, EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1, ADENOSINE-5'-TRIPHOSPHATE, ... | | Authors: | Preis, A., Heuer, A., Barrio-Garcia, C., Hauser, A., Eyler, D., Berninghausen, O., Green, R., Becker, T., Beckmann, R. | | Deposit date: | 2014-02-28 | | Release date: | 2014-07-23 | | Last modified: | 2019-11-20 | | Method: | ELECTRON MICROSCOPY (8.75 Å) | | Cite: | Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing Erf1-Erf3 or Erf1-Abce1.
Cell Rep., 8, 2014
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4CRN | | CRYO-EM OF A PRETERMINATION COMPLEX WITH ERF1 AND ERF3 | | Descriptor: | ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX, ERF1 IN RIBOSOME-BOUND ERF1-ERF3-GDPNP COMPLEX, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | | Authors: | Preis, A., Heuer, A., Barrio-Garcia, C., Hauser, A., Eyler, D., Berninghausen, O., Green, R., Becker, T., Beckmann, R. | | Deposit date: | 2014-02-28 | | Release date: | 2014-07-23 | | Last modified: | 2017-08-23 | | Method: | ELECTRON MICROSCOPY (9.1 Å) | | Cite: | Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing Erf1-Erf3 or Erf1-Abce1.
Cell Rep., 8, 2014
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4URD | | CRYO-EM MAP OF TRIGGER FACTOR BOUND TO A TRANSLATING RIBOSOME | | Descriptor: | TRIGGER FACTOR | | Authors: | Deeng, J., Chan, K.Y., van der Sluis, E., Bischoff, L., Berninghausen, O., Han, W., Gumbart, J., Schulten, K., Beatrix, B., Beckmann, R. | | Deposit date: | 2014-06-27 | | Release date: | 2016-01-13 | | Last modified: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (7.7 Å) | | Cite: | Dynamic Behavior of Trigger Factor on the Ribosome.
J.Mol.Biol., 428, 2016
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4UTQ | | A STRUCTURAL MODEL OF THE ACTIVE RIBOSOME-BOUND MEMBRANE PROTEIN INSERTASE YIDC | | Descriptor: | MEMBRANE PROTEIN INSERTASE YIDC, ATP SYNTHASE SUBUNIT C | | Authors: | Wickles, S., Singharoy, A., Andreani, J., Seemayer, S., Bischoff, L., Berninghausen, O., Soeding, J., Schulten, K., vanderSluis, E.O., Beckmann, R. | | Deposit date: | 2014-07-22 | | Release date: | 2014-07-30 | | Last modified: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (8 Å) | | Cite: | A Structural Model of the Active Ribosome-Bound Membrane Protein Insertase Yidc.
Elife, 3, 2014
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4UY8 | | MOLECULAR BASIS FOR THE RIBOSOME FUNCTIONING AS A L-TRYPTOPHAN SENSOR - CRYO-EM STRUCTURE OF A TNAC STALLED E.COLI RIBOSOME | | Descriptor: | 50S RIBOSOMAL PROTEIN L32, 50S RIBOSOMAL PROTEIN L33, 50S RIBOSOMAL PROTEIN L34, ... | | Authors: | Bischoff, L., Berninghausen, O., Beckmann, R. | | Deposit date: | 2014-08-29 | | Release date: | 2014-10-29 | | Last modified: | 2018-10-03 | | Method: | ELECTRON MICROSCOPY (3.8 Å) | | Cite: | Molecular Basis for the Ribosome Functioning as an L-Tryptophan Sensor.
Cell Rep., 9, 2014
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4V6M | | STRUCTURE OF THE RIBOSOME-SECYE COMPLEX IN THE MEMBRANE ENVIRONMENT | | Descriptor: | 16S RIBOSOMAL RNA, mRNA, FtsQ nascent chain, ... | | Authors: | Frauenfeld, J., Gumbart, J., van der Sluis, E.O., Funes, S., Gartmann, M., Beatrix, B., Mielke, T., Berninghausen, O., Becker, T., Schulten, K., Beckmann, R. | | Deposit date: | 2011-02-08 | | Release date: | 2014-07-09 | | Last modified: | 2019-12-18 | | Method: | ELECTRON MICROSCOPY (7.1 Å) | | Cite: | Cryo-EM structure of the ribosome-SecYE complex in the membrane environment.
Nat.Struct.Mol.Biol., 18, 2011
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