5A16 | | CRYSTAL STRUCTURE OF FAB4201 RAISED AGAINST HUMAN ERYTHROCYTE ANION EXCHANGER 1 | | Descriptor: | FAB4201 HEAVY CHAIN | | Authors: | Arakawa, T., Kobayashi-Yugiri, T., Alguel, Y., Weyand, S., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Ikeda-Suno, C., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A., Kobayashi, T., Hamasaki, N., Iwata, S. | | Deposit date: | 2015-04-28 | | Release date: | 2015-06-10 | | Last modified: | 2019-10-23 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystal Structure of the Anion Exchanger Domain of Human Erythrocyte Band 3
Science, 350, 2015
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5GTG | | CRYSTAL STRUCTURE OF ONION LACHRYMATORY FACTOR SYNTHASE (LFS) CONTAINING 1,2-PROPANEDIOL | | Descriptor: | Lachrymatory-factor synthase, S-1,2-PROPANEDIOL, TREHALOSE, ... | | Authors: | Arakawa, T., Sato, Y., Takabe, J., Masamura, N., Tsuge, N., Imai, S., Fushinobu, S. | | Deposit date: | 2016-08-20 | | Release date: | 2017-08-23 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Structure Of Allium Lachrymatory Factor Synthase Elucidates Catalysis On Sulfenic Acid Substrate
to be published
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1WOL | |
2DD4 | | THIOCYANATE HYDROLASE (SCNASE) FROM THIOBACILLUS THIOPARUS RECOMBINANT APO-ENZYME | | Descriptor: | Thiocyanate hydrolase alpha subunit, Thiocyanate hydrolase beta subunit, Thiocyanate hydrolase gamma subunit, ... | | Authors: | Arakawa, T., Kawano, Y., Kataoka, S., Katayama, Y., Kamiya, N., Yohda, M., Odaka, M. | | Deposit date: | 2006-01-19 | | Release date: | 2007-01-30 | | Last modified: | 2019-07-10 | | Method: | X-RAY DIFFRACTION (2.06 Å) | | Cite: | Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
J.Mol.Biol., 366, 2007
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2DD5 | | THIOCYANATE HYDROLASE (SCNASE) FROM THIOBACILLUS THIOPARUS NATIVE HOLO-ENZYME | | Descriptor: | Thiocyanate hydrolase alpha subunit, Thiocyanate hydrolase beta subunit, Thiocyanate hydrolase gamma subunit, ... | | Authors: | Arakawa, T., Kawano, Y., Kataoka, S., Katayama, Y., Kamiya, N., Yohda, M., Odaka, M. | | Deposit date: | 2006-01-19 | | Release date: | 2007-01-30 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
J.Mol.Biol., 366, 2007
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2DXB | | RECOMBINANT THIOCYANATE HYDROLASE COMPRISING PARTIALLY-MODIFIED COBALT CENTERS | | Descriptor: | Thiocyanate hydrolase subunit alpha, Thiocyanate hydrolase subunit beta, Thiocyanate hydrolase subunit gamma, ... | | Authors: | Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M. | | Deposit date: | 2006-08-25 | | Release date: | 2007-08-28 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.25 Å) | | Cite: | Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
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2DXC | | RECOMBINANT THIOCYANATE HYDROLASE, FULLY-MATURED FORM | | Descriptor: | Thiocyanate hydrolase subunit alpha, Thiocyanate hydrolase subunit beta, Thiocyanate hydrolase subunit gamma, ... | | Authors: | Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M. | | Deposit date: | 2006-08-25 | | Release date: | 2007-08-28 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
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2ZZD | | RECOMBINANT THIOCYANATE HYDROLASE, AIR-OXIDIZED FORM OF HOLO-ENZYME | | Descriptor: | Thiocyanate hydrolase subunit alpha, Thiocyanate hydrolase subunit beta, Thiocyanate hydrolase subunit gamma, ... | | Authors: | Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M. | | Deposit date: | 2009-02-09 | | Release date: | 2009-10-13 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.78 Å) | | Cite: | Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
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4YZF | | CRYSTAL STRUCTURE OF THE ANION EXCHANGER DOMAIN OF HUMAN ERYTHROCYTE BAND 3 | | Descriptor: | Band 3 anion transport protein, FAB fragment of Immunoglobulin (IgG) molecule, 2,2'-ethane-1,2-diylbis{5-[(sulfanylmethyl)amino]benzenesulfonic acid} | | Authors: | Alguel, Y., Arakawa, T., Yugiri, T.K., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Suno, C.I., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A.D., Kobayashi, T., Hamasaki, N., Iwata, S. | | Deposit date: | 2015-03-25 | | Release date: | 2015-11-04 | | Last modified: | 2015-11-18 | | Method: | X-RAY DIFFRACTION (3.5 Å) | | Cite: | Crystal structure of the anion exchanger domain of human erythrocyte band 3.
Science, 350, 2015
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5GTE | | CRYSTAL STRUCTURE OF ONION LACHRYMATORY FACTOR SYNTHASE (LFS), SOLUTE-FREE FORM | | Descriptor: | Lachrymatory-factor synthase, TREHALOSE, SULFATE ION | | Authors: | Takabe, J., Arakawa, T., Masamura, N., Tsuge, N., Imai, S., Fushinobu, S. | | Deposit date: | 2016-08-20 | | Release date: | 2017-08-23 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Structure Of Allium Lachrymatory Factor Synthase Elucidates Catalysis On Sulfenic Acid Substrate
to be published
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5GTF | | CRYSTAL STRUCTURE OF ONION LACHRYMATORY FACTOR SYNTHASE (LFS) CONTAINING GLYCEROL | | Descriptor: | Lachrymatory-factor synthase, GLYCEROL, SULFATE ION, ... | | Authors: | Takabe, J., Arakawa, T., Masamura, N., Tsuge, N., Imai, S., Fushinobu, S. | | Deposit date: | 2016-08-20 | | Release date: | 2017-08-23 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structure Of Allium Lachrymatory Factor Synthase Elucidates Catalysis On Sulfenic Acid Substrate
to be published
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6IES | | ONION LACHRYMATORY FACTOR SYNTHASE (LFS) CONTAINING (E)-2-PROPEN 1-OL (CROTYL ALCOHOL) | | Descriptor: | Lachrymatory-factor synthase, (2E)-but-2-en-1-ol | | Authors: | Sato, Y., Arakawa, T., Takabe, J., Masamura, N., Tsuge, N., Imai, S., Fushinobu, S. | | Deposit date: | 2018-09-17 | | Release date: | 2019-09-18 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Unraveling the Labile Sulfur Catalysis on Lachrymatory Factor Generation
To be published
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1UG8 | | NMR STRUCTURE OF THE R3H DOMAIN FROM POLY(A)-SPECIFIC RIBONUCLEASE | | Descriptor: | Poly(A)-specific Ribonuclease | | Authors: | Nagata, T., Muto, Y., Hayami, N., Uda, H., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Kobayashi, N., Tanaka, A., Osanai, T., Matsuo, Y., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-06-15 | | Release date: | 2004-08-17 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | NMR structure of the R3H domain from Poly(A)-specific Ribonuclease
To be Published
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1UGJ | | SOLUTION STRUCTURE OF A MURINE HYPOTHETICAL PROTEIN FROM RIKEN CDNA 2310057J16 | | Descriptor: | RIKEN cDNA 2310057J16 protein | | Authors: | Nagashima, T., Hayashi, F., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-06-16 | | Release date: | 2004-08-03 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a murine hypothetical protein from RIKEN cDNA 2310057J16
To be Published
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3VG9 | | CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN ALLOSTERIC INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION | | Descriptor: | Adenosine receptor A2a, antibody fab fragment light chain, antibody fab fragment heavy chain, ... | | Authors: | Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T. | | Deposit date: | 2011-08-04 | | Release date: | 2012-02-01 | | Last modified: | 2012-02-15 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody
Nature, 482, 2012
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3VGA | | CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN ALLOSTERIC INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION | | Descriptor: | Adenosine receptor A2a, antibody fab fragment light chain, antibody fab fragment heavy chain, ... | | Authors: | Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T. | | Deposit date: | 2011-08-04 | | Release date: | 2012-02-01 | | Last modified: | 2012-02-15 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody
Nature, 482, 2012
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1UFN | | SOLUTION STRUCTURE OF THE SAND DOMAIN OF THE PUTATIVE NUCLEAR PROTEIN HOMOLOG (5830484A20RIK) | | Descriptor: | putative nuclear protein homolog 5830484A20Rik | | Authors: | Tochio, N., Kobayashi, N., Koshiba, S., Kigawa, T., Inoue, M., Shirouzu, M., Terada, T., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Matsuo, Y., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-06-02 | | Release date: | 2004-06-22 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik)
To be Published
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1UG2 | | SOLUTION STRUCTURE OF MOUSE HYPOTHETICAL GENE (2610100B20RIK) PRODUCT HOMOLOGOUS TO MYB DNA-BINDING DOMAIN | | Descriptor: | 2610100B20Rik gene product | | Authors: | Zhao, C., Kigawa, T., Tochio, N., Koshiba, S., Inoue, M., Shirouzu, M., Terada, T., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Tanaka, A., Osanai, T., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-06-11 | | Release date: | 2004-06-22 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of Mouse Hypothetical Gene (2610100B20Rik) Product Homologous to Myb DNA-binding Domain
To be Published
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1UG7 | | SOLUTION STRUCTURE OF FOUR HELICAL UP-AND-DOWN BUNDLE DOMAIN OF THE HYPOTHETICAL PROTEIN 2610208M17RIK SIMILAR TO THE PROTEIN FLJ12806 | | Descriptor: | 2610208M17Rik protein | | Authors: | Li, H., Kigawa, T., Tomizawa, T., Koshiba, S., Inoue, M., Shirouzu, M., Terada, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-06-13 | | Release date: | 2004-08-17 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of four helical up-and-down bundle domain of the hypothetical protein 2610208M17Rik similar to the protein FLJ12806
To be Published
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1UH6 | | SOLUTION STRUCTURE OF THE MURINE UBIQUITIN-LIKE 5 PROTEIN FROM RIKEN CDNA 0610031K06 | | Descriptor: | ubiquitin-like 5 | | Authors: | Hayashi, F., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-06-25 | | Release date: | 2003-12-25 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06
To be Published
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1UHR | | SOLUTION STRUCTURE OF THE SWIB DOMAIN OF MOUSE BRG1-ASSOCIATED FACTOR 60A | | Descriptor: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily D member 1 | | Authors: | Yamada, K., Saito, K., Nameki, N., Inoue, M., Koshiba, S., Shirouzu, M., Terada, T., Yabuki, T., Aoki, M., Matsuda, T., Seki, E., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-07-09 | | Release date: | 2004-08-24 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the SWIB domain of mouse BRG1-associated factor 60a
To be Published
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1UHS | | SOLUTION STRUCTURE OF MOUSE HOMEODOMAIN-ONLY PROTEIN HOP | | Descriptor: | homeodomain only protein | | Authors: | Saito, K., Koshiba, S., Inoue, M., Shirouzu, M., Terada, T., Yabuki, T., Aoki, M., Matsuda, T., Seki, E., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-07-10 | | Release date: | 2004-07-10 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of mouse homeodomain-only protein HOP
To be Published
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1UHW | | SOLUTION STRUCTURE OF THE DEP DOMAIN OF MOUSE PLECKSTRIN | | Descriptor: | Pleckstrin | | Authors: | Inoue, K., Yoshida, M., Hatta, R., Hayashi, F., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Tanaka, A., Osanai, T., Matsuo, Y., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-07-11 | | Release date: | 2004-01-11 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the DEP domain of mouse pleckstrin
To be Published
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1V9J | | SOLUTION STRUCTURE OF A BOLA-LIKE PROTEIN FROM MUS MUSCULUS | | Descriptor: | BolA-like protein RIKEN cDNA 1110025L05 | | Authors: | Kasai, T., Inoue, M., Koshiba, S., Yabuki, T., Aoki, M., Nunokawa, E., Seki, E., Matsuda, T., Matsuda, N., Tomo, Y., Shirouzu, M., Terada, T., Obayashi, N., Hamana, H., Shinya, N., Tatsuguchi, A., Yasuda, S., Yoshida, M., Hirota, H., Matsuo, Y., Tani, K., Suzuki, H., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2004-01-26 | | Release date: | 2004-02-10 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a BolA-like protein from Mus musculus
Protein Sci., 13, 2004
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5AYB | | CRYSTAL STRUCTURE OF GH1 BETA-GLUCOSIDASE TD2F2 N223G MUTANT | | Descriptor: | BETA-GLUCOSIDASE, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, ... | | Authors: | Jo, T., Manninen, J.A., Matsuzawa, T., Uchiyama, T., Yaoi, K., Arakawa, T., Fushinobu, S. | | Deposit date: | 2015-08-12 | | Release date: | 2016-04-27 | | Last modified: | 2016-07-06 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2
Febs J., 283, 2016
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