Author results

1PIN
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PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM HOMO SAPIENS
Descriptor:PEPTIDYL-PROLYL CIS-TRANS ISOMERASE, ALANINE, PROLINE, ...
Authors:Noel, J.P., Ranganathan, R., Hunter, T.
Deposit date:1998-06-21
Release date:1998-10-14
Last modified:2014-02-26
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and functional analysis of the mitotic rotamase Pin1 suggests substrate recognition is phosphorylation dependent.
Cell(Cambridge,Mass.), 89, 1997
2QKT
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CRYSTAL STRUCTURE OF THE 5TH PDZ DOMAIN OF INAD
Descriptor:Inactivation-no-after-potential D protein
Authors:Ranganathan, R., Socolich, M.
Deposit date:2007-07-11
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dynamic Scaffolding in a G Protein-Coupled Signaling System.
Cell(Cambridge,Mass.), 131, 2007
2QKU
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THE 5TH PDZ DOMAIN OF INAD IN 10MM DTT
Descriptor:Inactivation-no-after-potential D protein, GLYCEROL
Authors:Ranganathan, R., Socolich, M., Wall, M.
Deposit date:2007-07-11
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dynamic Scaffolding in a G Protein-Coupled Signaling System.
Cell(Cambridge,Mass.), 131, 2007
2QKV
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CRYSTAL STRUCTURE OF THE C645S MUTANT OF THE 5TH PDZ DOMAIN OF INAD
Descriptor:Inactivation-no-after-potential D protein
Authors:Ranganathan, R., Socolich, M.
Deposit date:2007-07-11
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Dynamic Scaffolding in a G Protein-Coupled Signaling System.
Cell(Cambridge,Mass.), 131, 2007
1GGX
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RED FLUORESCENT PROTEIN (FP583 OR DSRED(CLONTECH)) FROM DISCOSOMA SP.
Descriptor:PROTEIN (FLUORESCENT PROTEIN FP583)
Authors:Wall, M.A., Socolich, M.A., Ranganathan, R.
Deposit date:2000-10-05
Release date:2000-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis for red fluorescence in the tetrameric GFP homolog DsRed.
Nat.Struct.Biol., 7, 2000
1Q4A
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S65T Q80R GREEN FLUORESCENT PROTEIN (GFP) PH 8.5
Descriptor:Green Fluorescent Protein
Authors:Jain, R.K., Ranganathan, R.
Deposit date:2003-08-02
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4B
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S65T Q80R GREEN FLUORESCENT PROTEIN (GFP) PH 5.5
Descriptor:Green Fluorescent Protein
Authors:Jain, R.K., Ranganathan, R.
Deposit date:2003-08-02
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4C
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S65T Q80R T203C GREEN FLUORESCENT PROTEIN (GFP) PH 8.5
Descriptor:Green Fluorescent Protein
Authors:Jain, R.K., Ranganathan, R.
Deposit date:2003-08-02
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4D
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S65T Q80R T203C GREEN FLUORESCENT PROTEIN (GFP) PH 5.5
Descriptor:Green Fluorescent Protein
Authors:Jain, R.K., Ranganathan, R.
Deposit date:2003-08-02
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4E
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S65T Q80R Y145C GREEN FLUORESCENT PROTEIN (GFP) PH 8.5
Descriptor:Green Fluorescent Protein
Authors:Jain, R.K., Ranganathan, R.
Deposit date:2003-08-02
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q73
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S65T Q80R Y145C T203C GREEN FLUORESCENT PROTEIN (GFP) PH 8.5
Descriptor:Green Fluorescent Protein
Authors:Jain, R.K., Ranganathan, R.
Deposit date:2003-08-15
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1YMZ
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CC45, AN ARTIFICIAL WW DOMAIN DESIGNED USING STATISTICAL COUPLING ANALYSIS
Descriptor:CC45
Authors:Socolich, M., Lockless, S.W., Russ, W.P., Lee, H., Gardner, K.H., Ranganathan, R.
Deposit date:2005-01-22
Release date:2005-09-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Evolutionary information for specifying a protein fold.
Nature, 437, 2005
2JRE
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C60-1, A PDZ DOMAIN DESIGNED USING STATISTICAL COUPLING ANALYSIS
Descriptor:C60-1 PDZ domain peptide
Authors:Larson, C., Stiffler, M., Li, P., Rosen, M., MacBeath, G., Ranganathan, R.
Deposit date:2007-06-25
Release date:2008-07-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:C60-1, a PDZ domain designed using statistical coupling analysis
To be Published
5E11
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SECOND PDZ DOMAIN OF LIGAND OF NUMB PROTEIN X 2 BY LAUE CRYSTALLOGRAPHY (NO ELECTRIC FIELD)
Descriptor:Ligand of Numb protein X 2
Authors:Hekstra, D.R., White, K.I., Socolich, M.A., Henning, R.W., Srajer, V., Ranganathan, R.
Deposit date:2015-09-29
Release date:2016-12-07
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E1Y
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PDZ2 OF LNX2 AT 277K, MODEL WITH ALTERNATE CONFORMATIONS
Descriptor:Ligand of Numb protein X 2
Authors:Hekstra, D.R., White, K.I., Socolich, M.A., Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2017-01-11
Method:X-RAY DIFFRACTION (1.011 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E21
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PDZ2 OF LNX2 AT 277K,SINGLE CONFORMER MODEL
Descriptor:Ligand of Numb protein X 2
Authors:Hekstra, D.R., White, K.I., Socolich, M.A., Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2017-01-11
Method:X-RAY DIFFRACTION (1.011 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E22
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THE SECOND PDZ DOMAIN OF LIGAND OF NUMB PROTEIN X 2 IN THE PRESENCE OF AN ELECTRIC FIELD OF ~1 MV/CM ALONG THE CRYSTALLOGRAPHIC X AXIS, WITH EIGHTFOLD EXTRAPOLATION OF STRUCTURE FACTOR DIFFERENCES.
Descriptor:Ligand of Numb protein X 2, GLYCEROL
Authors:Hekstra, D.R., White, K.I., Socolich, M.A., Henning, R.W., Srajer, V., Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5HDY
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95
Descriptor:Disks large homolog 4, GLYCEROL
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-05
Release date:2017-01-11
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The third PDZ domain from the synaptic protein PSD-95
To Be Published
5HEB
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM CRIPT
Descriptor:Disks large homolog 4, Cysteine-rich PDZ-binding protein, GLYCEROL
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-05
Release date:2016-11-16
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HED
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 IN COMPLEX WITH A MUTANT C-TERMINAL PEPTIDE DERIVED FROM CRIPT (T-2F)
Descriptor:Disks large homolog 4, Cysteine-rich PDZ-binding protein
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-05
Release date:2016-11-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HET
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 (G330T MUTANT)
Descriptor:Disks large homolog 4
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HEY
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 (G330T MUTANT) IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM CRIPT
Descriptor:Disks large homolog 4, Cysteine-rich PDZ-binding protein
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HF1
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 (G330T MUTANT) IN COMPLEX WITH A MUTANT C-TERMINAL PEPTIDE DERIVED FROM CRIPT (T-2F)
Descriptor:Disks large homolog 4, Cysteine-rich PDZ-binding protein
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HF4
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 (H372A MUTANT)
Descriptor:Disks large homolog 4, GLYCEROL
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-06
Release date:2017-01-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The third PDZ domain from the synaptic protein PSD-95 (H372A mutant)
To Be Published
5HFB
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 (H372A MUTANT) IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM CRIPT
Descriptor:Disks large homolog 4, Cysteine-rich PDZ-binding protein
Authors:White, K.I., Raman, A.S., Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Method:X-RAY DIFFRACTION (1.616 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
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