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1WE0
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BU of 1we0 by Molmil
Crystal structure of peroxiredoxin (AhpC) from Amphibacillus xylanus
Descriptor: AMMONIUM ION, alkyl hydroperoxide reductase C
Authors:Kitano, K, Kita, A, Hakoshima, T, Niimura, Y, Miki, K.
Deposit date:2004-05-21
Release date:2005-03-29
Last modified:2018-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of decameric peroxiredoxin (AhpC) from Amphibacillus xylanus
Proteins, 59, 2005
7E8R
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BU of 7e8r by Molmil
EcoT38I restriction endonuclease
Descriptor: EcoT38I restriction endonuclease, GLYCEROL
Authors:Kita, K, Mikami, B.
Deposit date:2021-03-02
Release date:2022-03-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of EcoT38I restriction endonuclease
To Be Published
7EDB
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BU of 7edb by Molmil
EcoT38I restriction endonuclease complexed with DNA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kita, K, Mikami, B.
Deposit date:2021-03-15
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural analysis of EcoT38I restriction endonuclease
To Be Published
1GEH
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BU of 1geh by Molmil
CRYSTAL STRUCTURE OF ARCHAEAL RUBISCO (RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE)
Descriptor: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, SULFATE ION
Authors:Kitano, K, Maeda, N, Fukui, T, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2000-11-13
Release date:2001-12-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Novel-Type Archaeal Rubisco with Pentagonal Symmetry
Structure, 9, 2001
5BRO
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BU of 5bro by Molmil
Crystal structure of modified HexB (modB)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase subunit beta, FORMIC ACID, ...
Authors:Kitakaze, K, Maita, N, Itoh, K.
Deposit date:2015-06-01
Release date:2016-05-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Protease-resistant modified human beta-hexosaminidase B ameliorates symptoms in GM2 gangliosidosis model.
J.Clin.Invest., 126, 2016
6KSL
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BU of 6ksl by Molmil
Staphylococcus aureus lipase - S116A inactive mutant
Descriptor: CALCIUM ION, LAURIC ACID, Lipase 2, ...
Authors:Kitadokoro, K, Tanaka, M, Kamitani, S.
Deposit date:2019-08-24
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of pathogenic Staphylococcus aureus lipase complex with the anti-obesity drug orlistat.
Sci Rep, 10, 2020
2SFA
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BU of 2sfa by Molmil
SERINE PROTEINASE FROM STREPTOMYCES FRADIAE ATCC 14544
Descriptor: SERINE PROTEINASE
Authors:Kitadokoro, K, Tsuzuki, H.
Deposit date:1994-04-25
Release date:1996-06-20
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Purification, characterization, primary structure, crystallization and preliminary crystallographic study of a serine proteinase from Streptomyces fradiae ATCC 14544.
Eur.J.Biochem., 220, 1994
3VIS
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BU of 3vis by Molmil
Crystal structure of cutinase Est119 from Thermobifida alba AHK119
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Esterase
Authors:Kitadokoro, K, Thumarat, U, Nakamura, R, Nishimura, K, Karatani, H, Suzuki, H, Kawai, F.
Deposit date:2011-10-11
Release date:2012-04-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of cutinase Est119 from Thermobida alba AHK119 that can degrade modpolyethylene terephthalate at 1.76 A resolution.
POLYM.DEGRAD.STAB., 97, 2012
1G8Q
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BU of 1g8q by Molmil
CRYSTAL STRUCTURE OF HUMAN CD81 EXTRACELLULAR DOMAIN, A RECEPTOR FOR HEPATITIS C VIRUS
Descriptor: CD81 ANTIGEN, EXTRACELLULAR DOMAIN
Authors:Kitadokoro, K, Bolognesi, M, Bordo, D, Grandi, G, Galli, G, Petracca, R, Falugi, F.
Deposit date:2000-11-20
Release date:2001-02-21
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CD81 extracellular domain 3D structure: insight into the tetraspanin superfamily structural motifs.
EMBO J., 20, 2001
1IV5
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BU of 1iv5 by Molmil
New Crystal Form of Human CD81 Large Extracellular Loop.
Descriptor: CD81 antigen
Authors:Kitadokoro, K, Bolognesi, M, Grandi, G, Marco, P, Galli, G, Petracca, R, Fabiana, F.
Deposit date:2002-03-14
Release date:2003-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Subunit Association and Conformational Flexibility in the Head-subdomain of Human CD81 Large Extracellular Loop.
Biol.Chem., 383, 2002
6AID
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BU of 6aid by Molmil
Structural insights into the unique polylactate degrading mechanism of Thermobifida alba cutinase
Descriptor: CALCIUM ION, Esterase, LACTIC ACID, ...
Authors:Kitadokoro, K, Kakara, M, Matsui, S, Osokoshi, R, Thumarat, U, Kawai, F, Kamitani, S.
Deposit date:2018-08-22
Release date:2019-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural insights into the unique polylactate-degrading mechanism of Thermobifida alba cutinase.
Febs J., 286, 2019
6KSM
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BU of 6ksm by Molmil
Staphylococcus aureus lipase -Orlistat complex
Descriptor: (2S,3S,5S)-5-[(N-FORMYL-L-LEUCYL)OXY]-2-HEXYL-3-HYDROXYHEXADECANOIC ACID, CALCIUM ION, LAURIC ACID, ...
Authors:Kitadokoro, K, Tanaka, M, Kamitani, S.
Deposit date:2019-08-24
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of pathogenic Staphylococcus aureus lipase complex with the anti-obesity drug orlistat.
Sci Rep, 10, 2020
6KSI
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BU of 6ksi by Molmil
Staphylococcus aureus lipase - native
Descriptor: CALCIUM ION, HEXANOIC ACID, LAURIC ACID, ...
Authors:Kitadokoro, K, Tanaka, M, Kamitani, S.
Deposit date:2019-08-24
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structure of pathogenic Staphylococcus aureus lipase complex with the anti-obesity drug orlistat.
Sci Rep, 10, 2020
3AM2
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BU of 3am2 by Molmil
Clostridium perfringens enterotoxin
Descriptor: GLYCEROL, Heat-labile enterotoxin B chain, UNKNOWN ATOM OR ION
Authors:Kitadokoro, K, Nishimura, K, Kamitani, S, Kimura, J, Fukui, A, Abe, H, Horiguchi, Y.
Deposit date:2010-08-12
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal Structure of Clostridium perfringens Enterotoxin Displays Features of {beta}-Pore-forming Toxins
J.Biol.Chem., 286, 2011
3WYN
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BU of 3wyn by Molmil
Structure of calcium bound cutinase Est119 from Thermobifida alba.
Descriptor: CALCIUM ION, Esterase, NONAETHYLENE GLYCOL
Authors:Kitadokoro, K, Thumarat, U, Kawai, F.
Deposit date:2014-09-02
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure of calcium bound cutinase Est119 from Thermobifida alba.
To be Published
2EC5
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BU of 2ec5 by Molmil
Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Descriptor: Dermonecrotic toxin
Authors:Kitadokoro, K, Horiguchi, Y, Kamitani, S.
Deposit date:2007-02-09
Release date:2007-03-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EBF
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BU of 2ebf by Molmil
Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Descriptor: Dermonecrotic toxin, PHOSPHONATE, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Kitadokoro, K, Horiguchi, Y, Kamitani, S.
Deposit date:2007-02-08
Release date:2007-03-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E1E
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BU of 2e1e by Molmil
Crystal structure of the HRDC Domain of Human Werner Syndrome Protein, WRN
Descriptor: CHLORIDE ION, Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Yoshihara, N, Hakoshima, T.
Deposit date:2006-10-25
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the HRDC domain of human Werner syndrome protein, WRN
J.Biol.Chem., 282, 2007
2EBH
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BU of 2ebh by Molmil
Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Descriptor: Dermonecrotic toxin, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Kitadokoro, K, Horiguchi, Y, Kamitani, S.
Deposit date:2007-02-08
Release date:2007-03-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E1F
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BU of 2e1f by Molmil
Crystal structure of the HRDC Domain of Human Werner Syndrome Protein, WRN
Descriptor: CHLORIDE ION, Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Yoshihara, N, Hakoshima, T.
Deposit date:2006-10-25
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the HRDC domain of human Werner syndrome protein, WRN
J.Biol.Chem., 282, 2007
2D2Q
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BU of 2d2q by Molmil
Crystal structure of the dimerized radixin FERM domain
Descriptor: Radixin
Authors:Kitano, K, Yusa, F, Hakoshima, T.
Deposit date:2005-09-15
Release date:2006-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of dimerized radixin FERM domain suggests a novel masking motif in C-terminal residues 295-304
ACTA CRYSTALLOGR.,SECT.F, 62, 2006
3AAF
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BU of 3aaf by Molmil
Structure of WRN RQC domain bound to double-stranded DNA
Descriptor: ACETATE ION, DNA (5'-D(*AP*CP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*GP*T)-3'), Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Hakoshima, T.
Deposit date:2009-11-16
Release date:2010-02-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for DNA strand separation by the unconventional winged-helix domain of RecQ helicase WRN
Structure, 18, 2010
1ZZE
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BU of 1zze by Molmil
X-ray Structure of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor
Descriptor: Aldehyde reductase II, SULFATE ION
Authors:Kamitori, S, Iguchi, A, Ohtaki, A, Yamada, M, Kita, K.
Deposit date:2005-06-14
Release date:2005-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray Structures of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor Provide Insights into Stereoselective Reductions of Carbonyl Compounds
J.Mol.Biol., 352, 2005
6IDJ
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BU of 6idj by Molmil
Crystal structure of human DHODH in complex with ferulenol
Descriptor: 4-oxidanyl-3-[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
Authors:Shiba, T, Inaoka, D.K, Sato, D, Hartuti, E.D, Amalia, E, Nagahama, M, Yoshioka, Y, Matsubayashi, M, Balogun, E.O, Tsuji, N, Kita, K, Harada, S.
Deposit date:2018-09-10
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Biochemical Features of Eimeria tenella Dihydroorotate Dehydrogenase, a Potential Drug Target.
Genes (Basel), 11, 2020
4JDB
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BU of 4jdb by Molmil
Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-005
Descriptor: 5-[2-(7-methoxynaphthalen-2-yl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ...
Authors:Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K.
Deposit date:2013-02-24
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-005
To be Published

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