Author results

1NYI
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CROSSLINKED HAMMERHEAD RIBOZYME INITIAL STATE
Descriptor:5'-R(P*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3', 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*AP*GP*UP*CP*AP*CP*CP*AP*C)-3', COBALT (II) ION, ...
Authors:Dunham, C.M., Murray, J.B., Scott, W.G.
Deposit date:2003-02-12
Release date:2004-02-24
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme.
J.Mol.Biol., 332, 2003
1Q29
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HAMMERHEAD RIBOZYME WITH 5'-5' G-G LINKAGE: CONFORMATIONAL CHANGE EXPERIMENT
Descriptor:5'-R(*GP*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3', Ribozyme, COBALT (II) ION
Authors:Dunham, C.M., Murray, J.B., Scott, W.G.
Deposit date:2003-07-23
Release date:2004-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme.
J.Mol.Biol., 332, 2003
1Y28
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CRYSTAL STRUCTURE OF THE R220A METBJFIXL HEME DOMAIN
Descriptor:Sensor protein fixL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Dunham, C.M., Dioum, E.M., Tuckerman, J.R., Gonzalez, G., Scott, W.G., Gilles-Gonzalez, M.A.
Deposit date:2004-11-21
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A distal arginine in the oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure
Biochemistry, 42, 2003
2UXB
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CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
Descriptor:16S RIBOSOMAL RNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Dunham, C.M., Selmer, M., Phelps, S.S., Kelley, A.C., Suzuki, T., Joseph, S., Ramakrishnan, V.
Deposit date:2007-03-28
Release date:2007-07-31
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit.
RNA, 13, 2007
2UXC
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CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
Descriptor:16S RIBOSOMAL RNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Dunham, C.M., Selmer, M., Phelps, S.S., Kelley, A.C., Suzuki, T., Joseph, S., Ramakrishnan, V.
Deposit date:2007-03-28
Release date:2007-05-08
Last modified:2015-05-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of Trnas with an Expanded Anticodon Loop in the Decoding Center of the 30S Ribosomal Subunit.
RNA, 13, 2007
2UXD
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CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
Descriptor:16S RIBOSOMAL RNA, RIBOSOMAL PROTEIN S2, RIBOSOMAL PROTEIN S3, ...
Authors:Dunham, C.M., Selmer, M., Phelps, S.S., Kelley, A.C., Suzuki, T., Joseph, S., Ramakrishnan, V.
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of Trnas with an Expanded Anticodon Loop in the Decoding Center of the 30S Ribosomal Subunit.
RNA, 13, 2007
1VVJ
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CRYSTAL STRUCTURE OF FRAMESHIFT SUPPRESSOR TRNA SUFA6 BOUND TO CODON CCC-G ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-05-24
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.440001 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
3UZ0
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CRYSTAL STRUCTURE OF SPOIIIAH AND SPOIIQ COMPLEX
Descriptor:Stage III sporulation protein AH, Stage II sporulation protein Q, SULFATE ION
Authors:Maehigashi, T., Meisner, J., Dunham, C.M.
Deposit date:2011-12-07
Release date:2012-03-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structure of the basal components of a bacterial transporter.
Proc.Natl.Acad.Sci.USA, 109, 2012
4L47
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CRYSTAL STRUCTURE OF FRAMESHIFT SUPPRESSOR TRNA SUFA6 BOUND TO CODON CCC-U ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-06-07
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.220001 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4L71
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CRYSTAL STRUCTURE OF FRAMESHIFT SUPPRESSOR TRNA SUFA6 BOUND TO CODON CCC-A ON THE RIBOSOME
Descriptor:16S Ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-06-13
Release date:2014-08-06
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (3.900001 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LEL
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CRYSTAL STRUCTURE OF FRAMESHIFT SUPPRESSOR TRNA SUFA6 BOUND TO CODON CCG-G ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-06-25
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LFZ
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CRYSTAL STRUCTURE OF FRAMESHIFT SUPPRESSOR TRNA SUFA6 BOUND TO CODON CCC-U IN THE ABSENCE OF PAROMOMYCIN
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-06-27
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.920001 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LNT
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CRYSTAL STRUCTURE OF TRNA PROLINE (CGG) BOUND TO CODON CCC-U ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-07-12
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LSK
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CRYSTAL STRUCTURE OF TRNA PROLINE (CGG) BOUND TO CODON CCG-G ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-07-22
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.480006 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LT8
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CRYSTAL STRUCTURE OF TRNA PROLINE (CGG) BOUND TO CODON CCC-G ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2013-07-23
Release date:2014-08-06
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.140002 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MCT
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P. VULGARIS HIGBA STRUCTURE, CRYSTAL FORM 1
Descriptor:Antidote protein, Killer protein
Authors:Schureck, M.A., Maehigashi, T., Dunham, C.M.
Deposit date:2013-08-21
Release date:2013-12-11
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Proteus vulgaris HigB-(HigA)2-HigB Toxin-Antitoxin Complex.
J.Biol.Chem., 289, 2014
4MCX
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P. VULGARIS HIGBA STRUCTURE, CRYSTAL FORM 2
Descriptor:Antidote protein, Killer protein
Authors:Schureck, M.A., Maehigashi, T., Dunham, C.M.
Deposit date:2013-08-21
Release date:2013-12-11
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the Proteus vulgaris HigB-(HigA)2-HigB Toxin-Antitoxin Complex.
J.Biol.Chem., 289, 2014
4OX9
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CRYSTAL STRUCTURE OF THE AMINOGLYCOSIDE RESISTANCE METHYLTRANSFERASE NPMA BOUND TO THE 30S RIBOSOMAL SUBUNIT
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Dunkle, J.A., Conn, G.L., Dunham, C.M.
Deposit date:2014-02-04
Release date:2014-04-09
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (3.8035 Å)
Cite:Molecular recognition and modification of the 30S ribosome by the aminoglycoside-resistance methyltransferase NpmA.
Proc.Natl.Acad.Sci.USA, 111, 2014
4P6F
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CRYSTAL STRUCTURE OF THE PEPTOLIDE 12C BOUND TO BACTERIAL RIBOSOME
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Fagan, C.E., Dunham, C.M.
Deposit date:2014-03-24
Release date:2014-10-01
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Macrolide-Peptide Conjugates as Probes of the Path of Travel of the Nascent Peptides through the Ribosome.
Acs Chem.Biol., 9, 2014
4P70
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CRYSTAL STRUCTURE OF UNMODIFIED TRNA PROLINE (CGG) BOUND TO CODON CCG ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Maehigashi, T., Dunkle, J.A., Dunham, C.M.
Deposit date:2014-03-25
Release date:2014-08-13
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.68 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PX8
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STRUCTURE OF P. VULGARIS HIGB TOXIN
Descriptor:Killer protein, CHLORIDE ION
Authors:Schureck, M.A., Dunkle, J.A., Maehigashi, T., Dunham, C.M.
Deposit date:2014-03-22
Release date:2015-10-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Defining the mRNA recognition signature of a bacterial toxin protein.
Proc.Natl.Acad.Sci.USA, 112, 2015
4Q2U
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CRYSTAL STRUCTURE OF THE E. COLI DINJ-YAFQ TOXIN-ANTITOXIN COMPLEX
Descriptor:Antitoxin DinJ, mRNA interferase YafQ, SULFATE ION
Authors:Maehigashi, T., Ruangprasert, A., Dunham, C.M.
Deposit date:2014-04-09
Release date:2014-06-11
Last modified:2014-08-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanisms of Toxin Inhibition and Transcriptional Repression by Escherichia coli DinJ-YafQ.
J.Biol.Chem., 289, 2014
4TUA
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CRYSTAL STRUCTURE OF ASL-THR BOUND TO CODON ACC-A ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Fagan, C.E., Dunham, C.M.
Deposit date:2014-06-24
Release date:2015-05-13
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural insights into translational recoding by frameshift suppressor tRNASufJ.
Rna, 20, 2014
4TUB
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CRYSTAL STRUCTURE OF TRNA-THR BOUND TO CODON ACC-C ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Fagan, C.E., Dunham, C.M.
Deposit date:2014-06-24
Release date:2015-05-13
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural insights into translational recoding by frameshift suppressor tRNASufJ.
Rna, 20, 2014
4TUC
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CRYSTAL STRUCTURE OF ASL-SUFJ BOUND TO CODON ACC-A ON THE RIBOSOME
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Fagan, C.E., Dunham, C.M.
Deposit date:2014-06-24
Release date:2015-05-13
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural insights into translational recoding by frameshift suppressor tRNASufJ.
Rna, 20, 2014
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