Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1GRM
DownloadVisualize
BU of 1grm by Molmil
REFINEMENT OF THE SPATIAL STRUCTURE OF THE GRAMICIDIN A TRANSMEMBRANE ION-CHANNEL (RUSSIAN)
Descriptor: GRAMICIDIN A
Authors:Arseniev, A.S, Barsukov, I.L, Lomize, A.L, Orekhov, V.Y, Bystrov, V.F.
Deposit date:1993-10-18
Release date:1994-01-31
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Refinement of the Spatial Structure of the Gramicidin a Ion Channel
Biol.Membr.(Ussr), 18, 1992
1SIS
DownloadVisualize
BU of 1sis by Molmil
SPATIAL STRUCTURE OF INSECTOTOXIN I5A BUTHUS EUPEUS BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY (RUSSIAN)
Descriptor: SCORPION INSECTOTOXIN I5A
Authors:Arseniev, A.S, Kondakov, V.I, Lomize, A.L, Maiorov, V.N, Bystrov, V.F.
Deposit date:1993-11-11
Release date:1994-04-30
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Determination of the spatial structure of insectotoxin 15A from Buthus erpeus by (1)H-NMR spectroscopy data
Bioorg.Khim., 17, 1991
1ZAD
DownloadVisualize
BU of 1zad by Molmil
Structure of cytotoxin I (CTI) from Naja Oxiana in complex with DPC micelle
Descriptor: Cytotoxin 1
Authors:Dubinnyi, M.A, Pustovalova, Y.E, Dubovskii, P.V, Utkin, Y.N, Konshina, A.G, Efremov, R.G, Arseniev, A.S.
Deposit date:2005-04-06
Release date:2006-06-20
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Interaction of three-finger toxins with phospholipid membranes: comparison of S- and P-type cytotoxins
Biochem.J., 387, 2005
8C5J
DownloadVisualize
BU of 8c5j by Molmil
Spatial structure of Lch-alpha peptide from two-component lantibiotic system Lichenicidin VK21
Descriptor: Lantibiotic lichenicidin VK21 A1
Authors:Mineev, K.S, Paramonov, A.S, Arseniev, A.S, Ovchinnikova, T.V, Shenkarev, Z.O.
Deposit date:2023-01-09
Release date:2023-03-22
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Specific Binding of the alpha-Component of the Lantibiotic Lichenicidin to the Peptidoglycan Precursor Lipid II Predetermines Its Antimicrobial Activity.
Int J Mol Sci, 24, 2023
8AR3
DownloadVisualize
BU of 8ar3 by Molmil
Solution structure of TLR9 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 9
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
8AR2
DownloadVisualize
BU of 8ar2 by Molmil
Solution structure of TLR5 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 5
Authors:Shabalkina, A.V, Kornilov, F.D, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
8AR0
DownloadVisualize
BU of 8ar0 by Molmil
Solution structure of TLR2 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 2
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
8AR1
DownloadVisualize
BU of 8ar1 by Molmil
Solution structure of TLR3 transmembrane and cytoplasmic juxtamembrane regions
Descriptor: Toll-like receptor 3
Authors:Kornilov, F.D, Shabalkina, A.V, Goncharuk, M.V, Goncharuk, S.A, Arseniev, A.S, Mineev, K.S.
Deposit date:2022-08-15
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.
Nat Commun, 14, 2023
6GWM
DownloadVisualize
BU of 6gwm by Molmil
Solution structure of rat RIP2 caspase recruitment domain
Descriptor: Receptor-interacting serine/threonine-protein kinase 2
Authors:Mineev, K.S, Goncharuk, S.A, Artemieva, L.E, Arseniev, A.S.
Deposit date:2018-06-25
Release date:2018-10-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:CARD domain of rat RIP2 kinase: Refolding, solution structure, pH-dependent behavior and protein-protein interactions.
PLoS ONE, 13, 2018
6HJ7
DownloadVisualize
BU of 6hj7 by Molmil
The NMR structure of NRADD death domain
Descriptor: Death domain-containing membrane protein NRADD
Authors:Nadezhdin, K.D, Mineev, K.S, Goncharuk, S.A, Arseniev, A.S.
Deposit date:2018-09-01
Release date:2019-05-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure of a full-length single-pass membrane protein NRADD.
Proteins, 87, 2019
1ZNU
DownloadVisualize
BU of 1znu by Molmil
Structure of cyclotide Kalata B1 in DPC micelles solution
Descriptor: Kalata B1
Authors:Shenkarev, Z.O, Nadezhdin, K.D, Sobol, V.A, Sobol, A.G, Skjeldal, L, Arseniev, A.S.
Deposit date:2005-05-12
Release date:2006-04-25
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Conformation and mode of membrane interaction in cyclotides. Spatial structure of kalata B1 bound to a dodecylphosphocholine micelle.
Febs J., 273, 2006
1R9U
DownloadVisualize
BU of 1r9u by Molmil
Refined structure of peptaibol zervamicin IIB in methanol solution from trans-hydrogen bond J couplings
Descriptor: ZERVAMICIN IIB
Authors:Shenkarev, Z.O, Balashova, T.A, Yakimenko, Z.A, Ovchinnikova, T.V, Arseniev, A.S.
Deposit date:2003-10-31
Release date:2004-11-09
Last modified:2018-10-10
Method:SOLUTION NMR
Cite:Biosynthetic Uniform 13C,15N-Labelling of Zervamicin Iib. Complete 13C and 15N NMR Assignment.
J.Pept.Sci., 9, 2003
1IMI
DownloadVisualize
BU of 1imi by Molmil
SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1
Descriptor: PROTEIN (ALPHA-CONOTOXIN IMI)
Authors:Maslennikov, I.V, Shenkarev, Z.O, Zhmak, M.N, Tsetlin, V.I, Ivanov, V.T, Arseniev, A.S.
Deposit date:1998-11-27
Release date:1999-04-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR spatial structure of alpha-conotoxin ImI reveals a common scaffold in snail and snake toxins recognizing neuronal nicotinic acetylcholine receptors.
FEBS Lett., 444, 1999
1J5J
DownloadVisualize
BU of 1j5j by Molmil
Solution structure of HERG-specific scorpion toxin BeKm-1
Descriptor: BeKm-1 toxin
Authors:Korolokova, Y.V, Bocharov, E.V, Angelo, K, Maslennikov, I.V, Grinenko, O.V, Lipkin, A.V, Nosireva, E.D, Pluzhnikov, K.A, Olesen, S.-P, Arseniev, A.S, Grishin, E.V.
Deposit date:2002-04-16
Release date:2002-11-20
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:New binding site on common molecular scaffold provides HERG channel specificity of scorpion toxin BeKm-1.
J.Biol.Chem., 277, 2002
1IH9
DownloadVisualize
BU of 1ih9 by Molmil
NMR Structure of Zervamicin IIB (peptaibol antibiotic) Bound to DPC Micelles
Descriptor: ZERVAMICIN IIB
Authors:Shenkarev, Z.O, Balasheva, T.A, Efremov, R.G, Yakimenko, Z.A, Ovchinnikova, T.V, Raap, J, Arseniev, A.S.
Deposit date:2001-04-19
Release date:2002-02-13
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:Spatial Structure of Zervamicin Iib Bound to Dpc Micelles: Implications for Voltage-Gating.
Biophys.J., 82, 2002
1LGL
DownloadVisualize
BU of 1lgl by Molmil
Solution structure of HERG-specific scorpion toxin BeKm-1
Descriptor: BeKm-1 toxin
Authors:Korolokova, Y.V, Bocharov, E.V, Angelo, K, Maslennikov, I.V, Grinenko, O.V, Lipkin, A.V, Nosireva, E.D, Pluzhnikov, K.A, Olesen, S.-P, Arseniev, A.S, Grishin, E.V.
Deposit date:2002-04-16
Release date:2002-11-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:New binding site on common molecular scaffold provides HERG channel specificity of scorpion toxin BeKm-1.
J.Biol.Chem., 277, 2002
2G9P
DownloadVisualize
BU of 2g9p by Molmil
NMR structure of a novel antimicrobial peptide, latarcin 2a, from spider (Lachesana tarabaevi) venom
Descriptor: antimicrobial peptide Latarcin 2a
Authors:Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S.
Deposit date:2006-03-07
Release date:2006-09-12
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Spatial structure and activity mechanism of a novel spider antimicrobial peptide.
Biochemistry, 45, 2006
1NOR
DownloadVisualize
BU of 1nor by Molmil
TWO-DIMENSIONAL 1H-NMR STUDY OF THE SPATIAL STRUCTURE OF NEUROTOXIN II FROM NAJA OXIANA
Descriptor: NEUROTOXIN II
Authors:Golovanov, A.P, Utkin, Y.N, Lomize, A.L, Tsetlin, V.I, Arseniev, A.S.
Deposit date:1993-04-05
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Two-dimensional 1H-NMR study of the spatial structure of neurotoxin II from Naja naja oxiana.
Eur.J.Biochem., 213, 1993
1BHA
DownloadVisualize
BU of 1bha by Molmil
THREE-DIMENSIONAL STRUCTURE OF (1-71) BACTERIOOPSIN SOLUBILIZED IN METHANOL-CHLOROFORM AND SDS MICELLES DETERMINED BY 15N-1H HETERONUCLEAR NMR SPECTROSCOPY
Descriptor: BACTERIORHODOPSIN
Authors:Pervushin, K.V, Orekhov, V.Y, Popov, A.I, Musina, L.Y, Arseniev, A.S.
Deposit date:1993-10-11
Release date:1994-01-31
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of (1-71)bacterioopsin solubilized in methanol/chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy.
Eur.J.Biochem., 219, 1994
1BHB
DownloadVisualize
BU of 1bhb by Molmil
Three-dimensional structure of (1-71) bacterioopsin solubilized in methanol-chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy
Descriptor: BACTERIORHODOPSIN
Authors:Orekhov, V.Y, Pervushin, K.V, Popov, A.I, Musina, L.Y, Arseniev, A.S.
Deposit date:1993-10-11
Release date:1994-01-31
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of (1-71)bacterioopsin solubilized in methanol/chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy.
Eur.J.Biochem., 219, 1994
5LM0
DownloadVisualize
BU of 5lm0 by Molmil
NMR spatial structure of Tk-hefu peptide
Descriptor: L-2
Authors:Mineev, K.S, Berkut, A.A, Novikova, E.V, Oparin, P.B, Grishin, E.V, Arseniev, A.S, Vassilevski, A.A.
Deposit date:2016-07-28
Release date:2017-08-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protein Surface Topography as a tool to enhance the selective activity of a potassium channel blocker.
J.Biol.Chem., 2019
5LQV
DownloadVisualize
BU of 5lqv by Molmil
Spatial structure of the lentil lipid transfer protein in complex with anionic lysolipid LPPG
Descriptor: 1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)], Non-specific lipid-transfer protein 2
Authors:Mineev, K.S, Shenkarev, Z.O, Arseniev, A.S, Melnikova, D.N, Finkina, E.I, Ovchinnikova, T.V.
Deposit date:2016-08-17
Release date:2017-06-28
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Ligand Binding Properties of the Lentil Lipid Transfer Protein: Molecular Insight into the Possible Mechanism of Lipid Uptake.
Biochemistry, 56, 2017
5LAH
DownloadVisualize
BU of 5lah by Molmil
NMR structure of the sea anemone peptide tau-AnmTx Ueq 12-1 with an uncommon fold
Descriptor: tau-AnmTx Ueq 12-1
Authors:Mineev, K.S, Arseniev, A.S, Andreev, Y.A, Kozlov, S.A, Logashina, Y.A.
Deposit date:2016-06-14
Release date:2017-05-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:New Disulfide-Stabilized Fold Provides Sea Anemone Peptide to Exhibit Both Antimicrobial and TRPA1 Potentiating Properties
Toxins, 9, 2017
1RQT
DownloadVisualize
BU of 1rqt by Molmil
NMR structure of dimeric N-terminal domain of ribosomal protein L7 from E.coli
Descriptor: 50S ribosomal protein L7/L12
Authors:Bocharov, E.V, Sobol, A.G, Pavlov, K.V, Korzhnev, D.M, Jaravine, V.A, Gudkov, A.T, Arseniev, A.S.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:From structure and dynamics of protein L7/L12 to molecular switching in ribosome.
J.Biol.Chem., 279, 2004
1RQV
DownloadVisualize
BU of 1rqv by Molmil
Spatial model of L7 dimer from E.coli with one hinge region in helical state
Descriptor: 50S ribosomal protein L7/L12
Authors:Bocharov, E.V, Sobol, A.G, Pavlov, K.V, Korzhnev, D.M, Jaravine, V.A, Gudkov, A.T, Arseniev, A.S.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:From structure and dynamics of protein L7/L12 to molecular switching in ribosome
J.Biol.Chem., 279, 2004

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon