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7SHX
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BU of 7shx by Molmil
A functional SNP regulates E-cadherin expression by dynamically remodeling the 3D structure of a promoter-associated non-coding RNA transcript, NMR, minimized average structure
Descriptor: RNA (94-MER)
Authors:Sharma, S, Varani, G.
Deposit date:2021-10-11
Release date:2022-10-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A functional SNP regulates E-cadherin expression by dynamically remodeling the 3D structure of a promoter-associated non-coding RNA transcript.
Nucleic Acids Res., 50, 2022
7MDY
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BU of 7mdy by Molmil
LolCDE nucleotide-bound
Descriptor: ADP ORTHOVANADATE, Lipo-releasing system transmembrane protein lolC, Lipoprotein transporter subunit LolE, ...
Authors:Sharma, S, Liao, M.
Deposit date:2021-04-06
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of LolCDE as a molecular extruder of bacterial triacylated lipoproteins
Nat Commun, 12, 2021
7MDX
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BU of 7mdx by Molmil
LolCDE nucleotide-free
Descriptor: (2R)-2-(tridecanoyloxy)propyl hexadecanoate, Lipoprotein-releasing system ATP-binding protein LolD, Lipoprotein-releasing system transmembrane protein LolC, ...
Authors:Sharma, S, Liao, M.
Deposit date:2021-04-06
Release date:2021-08-11
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Mechanism of LolCDE as a molecular extruder of bacterial triacylated lipoproteins
Nat Commun, 12, 2021
6W3M
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BU of 6w3m by Molmil
Solution NMR Structure of 5'UTR Stem Loop B in DENV4 Flavivirus.
Descriptor: RNA (41-MER)
Authors:Sharma, S, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-03-09
Release date:2020-09-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication.
Biochem.Biophys.Res.Commun., 531, 2020
8U1E
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BU of 8u1e by Molmil
Apo protein tyrosine phosphatase 1B (PTP1B) at high resolution (1.43 A) in space group P43212 with two distinctly ordered chains
Descriptor: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Sharma, S, Mehlman, S.T, Keedy, D.A.
Deposit date:2023-08-31
Release date:2023-09-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:High-resolution double vision of the allosteric phosphatase PTP1B.
Acta Crystallogr.,Sect.F, 80, 2024
1NKX
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BU of 1nkx by Molmil
CRYSTAL STRUCTURE OF A PROTEOLYTICALLY GENERATED FUNCTIONAL MONOFERRIC C-LOBE OF BOVINE LACTOFERRIN AT 1.9A RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Sharma, S, Jasti, J, Kumar, J, Mohanty, A.K, Singh, T.P.
Deposit date:2003-01-06
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a Proteolytically Generated Functional Monoferric C-lobe of Bovine Lactoferrin at 1.9A Resolution
J.Mol.Biol., 331, 2003
8F29
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BU of 8f29 by Molmil
Yeast ATP synthase in conformation-1 at pH 6
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase protein 8, ATP synthase subunit 4, ...
Authors:Sharma, S, Patel, H, Luo, M, Mueller, D.M, Liao, M.
Deposit date:2022-11-07
Release date:2024-02-07
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Conformational ensemble of yeast ATP synthase at low pH reveals unique intermediates and plasticity in F 1 -F o coupling.
Nat.Struct.Mol.Biol., 31, 2024
8F39
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BU of 8f39 by Molmil
Yeast ATP synthase in conformation-2, at pH 6
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase protein 8, ATP synthase subunit 4, ...
Authors:Sharma, S, Patel, H, Luo, M, Mueller, D.M, Liao, M.
Deposit date:2022-11-09
Release date:2024-02-07
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conformational ensemble of yeast ATP synthase at low pH reveals unique intermediates and plasticity in F 1 -F o coupling.
Nat.Struct.Mol.Biol., 31, 2024
8FKJ
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BU of 8fkj by Molmil
Yeast ATP Synthase in conformation-3, at pH 6
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, mitochondrial, ...
Authors:Sharma, S, Patel, H, Luo, M, Mueller, D.M, Liao, M.
Deposit date:2022-12-21
Release date:2024-01-24
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Conformational ensemble of yeast ATP synthase at low pH reveals unique intermediates and plasticity in F 1 -F o coupling.
Nat.Struct.Mol.Biol., 31, 2024
8FL8
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BU of 8fl8 by Molmil
Yeast ATP Synthase structure in presence of MgATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase protein 8, ...
Authors:Sharma, S, Patel, H, Luo, M, Mueller, D.M, Liao, M.
Deposit date:2022-12-21
Release date:2024-01-17
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Conformational ensemble of yeast ATP synthase at low pH reveals unique intermediates and plasticity in F 1 -F o coupling.
Nat.Struct.Mol.Biol., 31, 2024
2YIM
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BU of 2yim by Molmil
The enolisation chemistry of a thioester-dependent racemase: the 1.4 A crystal structure of a complex with a planar reaction intermediate analogue
Descriptor: 2-METHYLACETOACETYL COA, GLYCEROL, PHOSPHATE ION, ...
Authors:Sharma, S, Bhaumik, P, Venkatesan, R, Hiltunen, J.K, Conzelmann, E, Juffer, A.H, Wierenga, R.K.
Deposit date:2011-05-16
Release date:2012-03-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:The Enolization Chemistry of a Thioester-Dependent Racemase: The 1.4 A Crystal Structure of a Reaction Intermediate Complex Characterized by Detailed Qm/Mm Calculations.
J Phys Chem B, 116, 2012
6U79
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BU of 6u79 by Molmil
Solution NMR structure of 5' UTR stem loop B from West Nile Virus
Descriptor: 5' UTR region stem loop
Authors:Sharma, S, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-09-01
Release date:2020-08-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication.
Biochem.Biophys.Res.Commun., 531, 2020
2MDL
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BU of 2mdl by Molmil
Structure and NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)
Descriptor: Anti-lipopolysaccharide factor
Authors:Sharma, S, Barnwal, R, Yedery, R, Reddy, K.
Deposit date:2013-09-11
Release date:2014-09-17
Method:SOLUTION NMR
Cite:NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)
To be Published
8DU7
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BU of 8du7 by Molmil
Room-temperature serial synchrotron crystallography (SSX) structure of apo PTP1B
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1
Authors:Ebrahim, A, Sharma, S, Keedy, D.A.
Deposit date:2022-07-27
Release date:2022-08-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Room-temperature serial synchrotron crystallography of the human phosphatase PTP1B.
Acta Crystallogr.,Sect.F, 79, 2023
6IF9
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BU of 6if9 by Molmil
Solution-state NMR structure of G57W human gammaS crystallin
Descriptor: Gamma-crystallin S
Authors:Sharma, S, Bari, K.J, Chary, K.V.R.
Deposit date:2018-09-19
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of G57W mutant of human gamma S-crystallin and its involvement in cataract formation.
J. Struct. Biol., 205, 2019
2A7T
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BU of 2a7t by Molmil
Crystal Structure of a novel neurotoxin from Buthus tamalus at 2.2A resolution.
Descriptor: Neurotoxin
Authors:Ethayathulla, A.S, Sharma, M, Saravanan, K, Sharma, S, Kaur, P, Yadav, S, Srinivasan, A, Singh, T.P.
Deposit date:2005-07-06
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a highly acidic neurotoxin from scorpion Buthus tamulus at 2.2A resolution reveals novel structural features.
J.Struct.Biol., 155, 2006
9IYH
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BU of 9iyh by Molmil
Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.25 A resolution.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHONOACETIC ACID, ...
Authors:Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2024-07-30
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.25 A resolution.
To Be Published
9IYF
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BU of 9iyf by Molmil
Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.37 A resolution.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHONOACETIC ACID, ...
Authors:Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2024-07-30
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.37 A resolution.
To Be Published
9IT8
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BU of 9it8 by Molmil
Crystal structure of the ternary complex of lactoperoxidase with nitric oxide and nitrite ion at 1.95 A resolution
Descriptor: 1,2-ETHANEDIOL, 1-(OXIDOSULFANYL)METHANAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Maurya, A, Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2024-07-19
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Crystal structure of the ternary complex of lactoperoxidase with nitric oxide and nitrite ion at 1.95 A resolution
To Be Published
9IYE
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BU of 9iye by Molmil
Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.39 A resolution.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHONOACETIC ACID, ...
Authors:Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2024-07-30
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.39 A resolution.
To Be Published
9IYG
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BU of 9iyg by Molmil
Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the 17-mer expression tag bound in the substrate binding site of a neighbouring molecule at 2.60 A resolution.
Descriptor: CITRIC ACID, GLYCEROL, Phosphopantetheine adenylyltransferase
Authors:Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2024-07-30
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the 17-mer expression tag bound in the substrate binding site of a neighbouring molecule at 2.60 A resolution.
To Be Published
4XY7
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BU of 4xy7 by Molmil
Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 2.5 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein
Authors:Yamini, S, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-02-02
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with N- acetylglucosamine at 2.5 A resolution
To Be Published
3RK8
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BU of 3rk8 by Molmil
Crystal structure of the chloride inhibited dihydrodipicolinate synthase from Acinetobacter baumannii complexed with pyruvate at 1.8 A resolution
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Dihydrodipicolinate synthase, ...
Authors:Kaushik, S, Singh, A, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-17
Release date:2011-04-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the chloride inhibited dihydrodipicolinate synthase from Acinetobacter baumannii complexed with pyruvate at 1.8 A resolution
To be Published
5XGY
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BU of 5xgy by Molmil
Crystal structure of peptidoglycan recognition protein (PGRP-S) at 2.45 A resolution
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Peptidoglycan recognition protein 1
Authors:Shokeen, A, Sharma, P, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-04-18
Release date:2017-05-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of peptidoglycan recognition protein (PGRP-S) at 2.45 A resolution
To Be Published
4LL2
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BU of 4ll2 by Molmil
Crystal structure of plant lectin with two metal binding sites from cicer arietinum at 2.6 angstrom resolution
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Lectin, ...
Authors:Kumar, S, Dube, D, Bhushan, A, Dey, S, Sharma, S, Singh, T.P.
Deposit date:2013-07-09
Release date:2013-10-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure plant lectinwith two metal binding sites from cicer arietinum at 2.6 angstrom resolution
TO BE PUBLISHED

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PDB entries from 2024-09-18

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