Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4F0M
DownloadVisualize
BU of 4f0m by Molmil
UNACTIVATED RUBISCO with MAGNESIUM AND A WATER MOLECULE BOUND
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Stec, B.
登録日2012-05-04
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
5OYA
DownloadVisualize
BU of 5oya by Molmil
Unusual posttranslational modifications revealed in crystal structures of diatom Rubisco.
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Valegard, K, Andersson, I.
登録日2017-09-08
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional analyses of Rubisco from arctic diatom species reveal unusual posttranslational modifications.
J. Biol. Chem., 293, 2018
8BDB
DownloadVisualize
BU of 8bdb by Molmil
Ribulose-1,5-bisphosphate carboxylase/oxygenase from Griffithsia monilis
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, BICARBONATE ION, ...
著者Andersson, I, Gunn, L.H.
登録日2022-10-19
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Grafting Rhodobacter sphaeroides with red algae Rubisco to accelerate catalysis and plant growth.
Nat.Plants, 9, 2023
7YK5
DownloadVisualize
BU of 7yk5 by Molmil
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Multifunctional fusion protein, PYCO1 LSU binding motif, ...
著者Oh, Z.G, Ang, W.S.L, Bhushan, S, Mueller-Cajar, O.
登録日2022-07-21
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献A linker protein from a red-type pyrenoid phase separates with Rubisco via oligomerizing sticker motifs.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BCM
DownloadVisualize
BU of 8bcm by Molmil
Structure of Synechococcus elongatus PCC 7942 Rubisco recombinantly expressed from E.coli
分子名称: Ribulose 1,5-bisphosphate carboxylase small subunit, Ribulose bisphosphate carboxylase large chain
著者Ni, T, Sun, Y, Liu, L.N, Zhang, P.
登録日2022-10-17
公開日2023-11-01
実験手法ELECTRON MICROSCOPY (2.15 Å)
主引用文献Structure of Rubisco
To Be Published
5MZ2
DownloadVisualize
BU of 5mz2 by Molmil
Rubisco from Thalassiosira antarctica
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Andersson, I, Valegard, K.
登録日2017-01-30
公開日2018-02-14
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and functional analyses of Rubisco from arctic diatom species reveal unusual posttranslational modifications.
J. Biol. Chem., 293, 2018
1BXN
DownloadVisualize
BU of 1bxn by Molmil
THE CRYSTAL STRUCTURE OF RUBISCO FROM ALCALIGENES EUTROPHUS TO 2.7 ANGSTROMS.
分子名称: PHOSPHATE ION, PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN), PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN)
著者Hansen, S, Vollan, V.B, Hough, E, Andersen, K.
登録日1998-10-06
公開日1999-10-06
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of rubisco from Alcaligenes eutrophus reveals a novel central eight-stranded beta-barrel formed by beta-strands from four subunits.
J.Mol.Biol., 288, 1999
7YYO
DownloadVisualize
BU of 7yyo by Molmil
Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
著者Mann, D, Evans, S.L, Bergeron, J.R.C.
登録日2022-02-18
公開日2023-01-25
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Single-particle cryo-EM analysis of the shell architecture and internal organization of an intact alpha-carboxysome.
Structure, 31, 2023
7SNV
DownloadVisualize
BU of 7snv by Molmil
H. neapolitanus carboxysomal rubisco/CsoSCA-peptide (1-50)complex
分子名称: Carboxysome shell carbonic anhydrase, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain
著者Blikstad, C, Dugan, E, Laughlin, T.G, Liu, M, Shoemaker, S, Remis, J, Savage, D.F.
登録日2021-10-28
公開日2023-05-03
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.07 Å)
主引用文献Identification of a carbonic anhydrase-Rubisco complex within the alpha-carboxysome.
Proc.Natl.Acad.Sci.USA, 120, 2023
7SMK
DownloadVisualize
BU of 7smk by Molmil
H. neapolitanus carboxysomal rubisco/CsoSCA-peptide (1-50)complex
分子名称: Carboxysome shell carbonic anhydrase, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain
著者Blikstad, C, Dugan, E, Laughlin, T.G, Liu, M, Shoemaker, S, Remis, J, Savage, D.F.
登録日2021-10-26
公開日2023-05-24
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献Identification of a carbonic anhydrase-Rubisco complex within the alpha-carboxysome.
Proc.Natl.Acad.Sci.USA, 120, 2023
7ZC1
DownloadVisualize
BU of 7zc1 by Molmil
Subtomogram averaging of Rubisco from Cyanobium carboxysome
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase, small subunit
著者Ni, T, Zhu, Y, Seaton-Burn, W, Zhang, P.
登録日2022-03-25
公開日2022-07-06
最終更新日2023-01-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
7ZBT
DownloadVisualize
BU of 7zbt by Molmil
Subtomogram averaging of Rubisco from native Halothiobacillus carboxysomes
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit
著者Ni, T, Zhu, Y, Yu, X, Sun, Y, Liu, L, Zhang, P.
登録日2022-03-24
公開日2022-07-20
最終更新日2023-01-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
4F0K
DownloadVisualize
BU of 4f0k by Molmil
UNACTIVATED RUBISCO with MAGNESIUM AND CARBON DIOXIDE BOUND
分子名称: CARBON DIOXIDE, CHLORIDE ION, GLYCEROL, ...
著者Stec, B.
登録日2012-05-04
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
5N9Z
DownloadVisualize
BU of 5n9z by Molmil
Rubisco from Thalassiosira hyalina
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Andersson, I, Valegard, K.
登録日2017-02-27
公開日2018-03-14
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structural and functional analyses of Rubisco from arctic diatom species reveal unusual posttranslational modifications.
J. Biol. Chem., 293, 2018
8CMY
DownloadVisualize
BU of 8cmy by Molmil
Structure of the Cyanobium sp. PCC 7001 determined with C1 symmetry
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
著者Evans, S.L, Bergeron, J.R.C.
登録日2023-02-21
公開日2023-03-22
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Single-particle cryo-EM analysis of the shell architecture and internal organization of an intact alpha-carboxysome.
Structure, 31, 2023
2OEK
DownloadVisualize
BU of 2oek by Molmil
Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ions
分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, MAGNESIUM ION
著者Fedorov, A.A, Imker, H.J, Fedorov, E.V, Almo, S.C, Gerlt, J.A.
登録日2006-12-30
公開日2007-03-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus.
Biochemistry, 46, 2007
1EJ7
DownloadVisualize
BU of 1ej7 by Molmil
CRYSTAL STRUCTURE OF UNACTIVATED TOBACCO RUBISCO WITH BOUND PHOSPHATE IONS
分子名称: PHOSPHATE ION, RUBISCO (LARGE SUBUNIT), RUBISCO (SMALL SUBUNIT)
著者Duff, A.P, Andrews, T.J, Curmi, P.M.G.
登録日2000-03-01
公開日2000-03-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The transition between the open and closed states of rubisco is triggered by the inter-phosphate distance of the bound bisphosphate.
J.Mol.Biol., 298, 2000
8DHT
DownloadVisualize
BU of 8dht by Molmil
Crystal structure of a typeIII Rubisco
分子名称: 3-PHOSPHOGLYCERIC ACID, ACETATE ION, GLYCEROL, ...
著者Qingqiu, H.
登録日2022-06-28
公開日2022-11-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Crystal structure of a type III Rubisco in complex with its product 3-phosphoglycerate.
Proteins, 91, 2023
5NV3
DownloadVisualize
BU of 5nv3 by Molmil
Structure of Rubisco from Rhodobacter sphaeroides in complex with CABP
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
著者Bracher, A, Milicic, G, Ciniawsky, S, Wendler, P, Hayer-Hartl, M, Hartl, F.U.
登録日2017-05-03
公開日2017-07-26
最終更新日2017-09-20
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Mechanism of Enzyme Repair by the AAA(+) Chaperone Rubisco Activase.
Mol. Cell, 67, 2017
2OEM
DownloadVisualize
BU of 2oem by Molmil
Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and 2,3-diketohexane 1-phosphate
分子名称: (1Z)-2-HYDROXY-3-OXOHEX-1-EN-1-YL DIHYDROGEN PHOSPHATE, 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, MAGNESIUM ION
著者Fedorov, A.A, Imker, H.J, Fedorov, E.V, Gerlt, J.A, Almo, S.C.
登録日2006-12-30
公開日2007-03-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus.
Biochemistry, 46, 2007
2OEJ
DownloadVisualize
BU of 2oej by Molmil
Crystal structure of a rubisco-like protein from Geobacillus kaustophilus (tetramutant form), liganded with phosphate ions
分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, PHOSPHATE ION
著者Fedorov, A.A, Imker, H.J, Fedorov, E.V, Almo, S.C, Gerlt, J.A.
登録日2006-12-30
公開日2007-03-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus.
Biochemistry, 46, 2007
7T1J
DownloadVisualize
BU of 7t1j by Molmil
Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2021-12-02
公開日2022-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
7T1C
DownloadVisualize
BU of 7t1c by Molmil
Crystal structure of RUBISCO from Sulfurivirga caldicuralii
分子名称: Ribulose-bisphosphate carboxylase
著者Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2021-12-01
公開日2022-09-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
2OEL
DownloadVisualize
BU of 2oel by Molmil
Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and HCO3- ions
分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, CARBONATE ION, MAGNESIUM ION
著者Fedorov, A.A, Imker, H.J, Fedorov, E.V, Almo, S.C, Gerlt, J.A.
登録日2006-12-30
公開日2007-03-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus.
Biochemistry, 46, 2007
4HHH
DownloadVisualize
BU of 4hhh by Molmil
Structure of Pisum sativum Rubisco
分子名称: RIBULOSE-1,5-DIPHOSPHATE, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain
著者Loewen, P.C, Didychuk, A.L, Switala, J, Loewen, M.C.
登録日2012-10-09
公開日2012-10-31
最終更新日2013-01-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Pisum sativum Rubisco with bound ribulose 1,5-bisphosphate.
Acta Crystallogr.,Sect.F, 69, 2013

219515

件を2024-05-08に公開中

PDB statisticsPDBj update infoContact PDBjnumon