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1U12
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BU of 1u12 by Molmil
M. loti cyclic nucleotide binding domain mutant
Descriptor: IODIDE ION, POTASSIUM ION, SULFATE ION, ...
Authors:Clayton, G.M, Silverman, W.R, Heginbotham, L, Morais-Cabral, J.H.
Deposit date:2004-07-14
Release date:2004-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis of Ligand Activation in a Cyclic Nucleotide Regulated Potassium Channel
Cell(Cambridge,Mass.), 119, 2004
1ZYB
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BU of 1zyb by Molmil
Crystal structure of transcription regulator from Bacteroides thetaiotaomicron VPI-5482 at 2.15 A resolution
Descriptor: GLYCEROL, transcription regulator, CRP family
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-06-09
Release date:2005-07-19
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of transcription regulator from Bacteroides thetaiotaomicron VPI-5482 at 2.15 A resolution
To be published
2BYV
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BU of 2byv by Molmil
Structure of the cAMP responsive exchange factor Epac2 in its auto- inhibited state
Descriptor: RAP GUANINE NUCLEOTIDE EXCHANGE FACTOR 4
Authors:Rehmann, H, Wittinghofer, A, Bos, J.L.
Deposit date:2005-08-08
Release date:2006-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Cyclic-AMP Responsive Exchange Factor Epac2 in its Auto-Inhibited State
Nature, 439, 2006
1ZRE
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BU of 1zre by Molmil
4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6G;17C]ICAP38 DNA
Descriptor: 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*GP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*CP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
Authors:Berman, H.M, Napoli, A.A.
Deposit date:2005-05-19
Release date:2006-03-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps.
J.Mol.Biol., 357, 2006
1ZRC
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BU of 1zrc by Molmil
4 Crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-ICAP38 DNA
Descriptor: 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
Authors:Berman, H.M, Napoli, A.A.
Deposit date:2005-05-19
Release date:2006-03-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps.
J.Mol.Biol., 357, 2006
1ZRF
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BU of 1zrf by Molmil
4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6C;17G]ICAP38 DNA
Descriptor: 1,4-DIETHYLENE DIOXIDE, 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ...
Authors:Berman, H.M, Napoli, A.A.
Deposit date:2005-05-19
Release date:2006-03-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps.
J.Mol.Biol., 357, 2006
1ZRD
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BU of 1zrd by Molmil
4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6A;17T]ICAP38 DNA
Descriptor: 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*AP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*TP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
Authors:Berman, H.M, Napoli, A.A.
Deposit date:2005-05-19
Release date:2006-03-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps.
J.Mol.Biol., 357, 2006
2GAU
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BU of 2gau by Molmil
Crystal structure of transcriptional regulator, Crp/Fnr family from Porphyromonas gingivalis (APC80792), Structural genomics, MCSG
Descriptor: transcriptional regulator, Crp/Fnr family
Authors:Rotella, F.J, Zhang, R.G, Mulligan, R, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-09
Release date:2006-04-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9-A crystal structure of transcriptional regulator, Crp/Fnr family from Porphyromonas gingivalis
To be Published
2D93
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BU of 2d93 by Molmil
Solution structure of the cNMP_binding domain of human Rap guanine nucleotide exchange factor 6
Descriptor: Rap guanine nucleotide exchange factor 6
Authors:Inoue, K, Muto, Y, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-06-08
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the cNMP_binding domain of human Rap guanine nucleotide exchange factor 6
to be published
2H6B
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BU of 2h6b by Molmil
Crystal structure of oxidized CprK in complex with o-chlorophenolacetic acid
Descriptor: (3-CHLORO-4-HYDROXYPHENYL)ACETIC ACID, ChloroPhenol Reduction gene K, SULFATE ION
Authors:Joyce, M.G, Levy, C, Leys, D.
Deposit date:2006-05-31
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CprK Crystal Structures Reveal Mechanism for Transcriptional Control of Halorespiration.
J.Biol.Chem., 281, 2006
2H6C
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BU of 2h6c by Molmil
Crystal structure of reduced CprK in absence of any ligand
Descriptor: ChloroPhenol Reduction gene K
Authors:Levy, C, Leys, D.
Deposit date:2006-05-31
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:CprK Crystal Structures Reveal Mechanism for Transcriptional Control of Halorespiration.
J.Biol.Chem., 281, 2006
2FMY
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BU of 2fmy by Molmil
CO-dependent transcription factor CooA from Carboxydothermus hydrogenoformans (Imidazole-bound form)
Descriptor: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, carbon monoxide oxidation system transcription regulator CooA-1
Authors:Higuchi, Y, Komori, H.
Deposit date:2006-01-10
Release date:2007-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of CO-sensing Transcription Activator CooA Bound to Exogenous Ligand Imidazole
J.Mol.Biol., 367, 2007
2HKX
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BU of 2hkx by Molmil
Structure of CooA mutant (N127L/S128L) from Carboxydothermus hydrogenoformans
Descriptor: CARBON MONOXIDE, Carbon monoxide oxidation system transcription regulator CooA-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lanz, N.D, Borjigin, M, Li, H, Kerby, R.L, Poulos, T.L, Roberts, G.P.
Deposit date:2006-07-05
Release date:2007-03-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based hypothesis on the activation of the CO-sensing transcription factor CooA.
Acta Crystallogr.,Sect.D, 63, 2007
2GZW
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BU of 2gzw by Molmil
Crystal structure of the E.coli CRP-cAMP complex
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-12
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of activated CRP protein from E coli
To be Published
2PQQ
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BU of 2pqq by Molmil
Structural Genomics, the crystal structure of the N-terminal domain of a transcriptional regulator from Streptomyces coelicolor A3(2)
Descriptor: FORMIC ACID, Putative transcriptional regulator
Authors:Tan, K, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-05-02
Release date:2007-06-05
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the N-terminal domain of a transcriptional regulator from Streptomyces coelicolor A3(2)
To be Published
2PTM
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BU of 2ptm by Molmil
Structure and rearrangements in the carboxy-terminal region of SpIH channels
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, COBALT HEXAMMINE(III), Hyperpolarization-activated (Ih) channel
Authors:Flynn, G.E, Black, K.D, Islas, L.D, Sankaran, B, Zagotta, W.N.
Deposit date:2007-05-08
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure and rearrangements in the carboxy-terminal region of SpIH channels.
Structure, 15, 2007
2Q0A
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BU of 2q0a by Molmil
Structure and rearrangements in the carboxy-terminal region of SpIH channels
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Authors:Flynn, G.E, Black, K.D, Islas, L.D, Sankaran, B, Zagotta, W.N.
Deposit date:2007-05-21
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure and rearrangements in the carboxy-terminal region of SpIH channels.
Structure, 15, 2007
2QVS
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BU of 2qvs by Molmil
Crystal Structure of Type IIa Holoenzyme of cAMP-dependent Protein Kinase
Descriptor: cAMP-dependent protein kinase type II-alpha regulatory subunit, cAMP-dependent protein kinase, alpha-catalytic subunit
Authors:Wu, J, Brown, S.H.J, von Daake, S, Taylor, S.S.
Deposit date:2007-08-08
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:PKA type IIalpha holoenzyme reveals a combinatorial strategy for isoform diversity.
Science, 318, 2007
2QCS
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BU of 2qcs by Molmil
A complex structure between the Catalytic and Regulatory subunit of Protein Kinase A that represents the inhibited state
Descriptor: ACETATE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Kim, C, Cheng, C.Y, Saldanha, A.S, Taylor, S.S.
Deposit date:2007-06-19
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PKA-I holoenzyme structure reveals a mechanism for cAMP-dependent activation.
Cell(Cambridge,Mass.), 130, 2007
2ZCW
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BU of 2zcw by Molmil
Crystal Structure of TTHA1359, a Transcriptional Regulator, CRP/FNR family from Thermus thermophilus HB8
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Transcriptional regulator, FNR/CRP family
Authors:Agari, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-13
Release date:2007-12-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator
Mol.Microbiol., 70, 2008
3BEH
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BU of 3beh by Molmil
Structure of a Bacterial Cyclic Nucleotide Regulated Ion Channel
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Mll3241 protein, POTASSIUM ION
Authors:Clayton, G.M, Morais-Cabral, J.H.
Deposit date:2007-11-18
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the transmembrane regions of a bacterial cyclic nucleotide-regulated channel.
Proc.Natl.Acad.Sci.USA, 105, 2008
2OZ6
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BU of 2oz6 by Molmil
Crystal Structure of Virulence Factor Regulator from Pseudomonas aeruginosa in complex with cAMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Virulence Factor Regulator
Authors:Cordes, T.J, Bright, A.R, Forest, K.T.
Deposit date:2007-02-24
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Pseudomonas aeruginosa Virulence Factor Regulator.
J.Bacteriol., 193, 2011
2Z69
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BU of 2z69 by Molmil
Crystal Structure of the sensor domain of the transcriptional regulator DNR from Pseudomonas aeruginosa
Descriptor: DNR protein
Authors:Giardina, G, Johnson, K.A, Di Matteo, A.
Deposit date:2007-07-24
Release date:2008-03-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NO sensing in Pseudomonas aeruginosa: structure of the transcriptional regulator DNR.
J.Mol.Biol., 378, 2008
3BPZ
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BU of 3bpz by Molmil
HCN2-I 443-460 E502K in the presence of cAMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Authors:Craven, K.B, Olivier, N.B, Zagotta, W.N.
Deposit date:2007-12-19
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:C-terminal movement during gating in cyclic nucleotide-modulated channels.
J.Biol.Chem., 283, 2008
3CO2
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BU of 3co2 by Molmil
Mlotik1 ion channel cyclic-nucleotide binding domain mutant
Descriptor: Mlotik1 ion channel protein
Authors:Clayton, G.M, Alteiri, S.L, Thomas, L.R, Morais-Cabral, J.H.
Deposit date:2008-03-27
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Energetic Analysis of Activation by a Cyclic Nucleotide Binding Domain.
J.Mol.Biol., 381, 2008

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