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PDB: 324 results

6JQQ
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BU of 6jqq by Molmil
KatE H392C from Escherichia coli
Descriptor: 1,2-ETHANEDIOL, Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Park, J.B, Cho, H.-S.
Deposit date:2019-04-01
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:KatE H392C from Escherichia coli
To Be Published
4XQR
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BU of 4xqr by Molmil
Crystal structure of unliganded human FPPS at 2.15 angstrom resolution
Descriptor: Farnesyl pyrophosphate synthase, PHOSPHATE ION
Authors:Park, J, Berghuis, A.M.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of unliganded human FPPS at 2.15 angstrom resolution
To Be Published
5YGM
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BU of 5ygm by Molmil
Monomeric structure of concanavalin A at pH 7.5 from Carnivalia ensiformis
Descriptor: CALCIUM ION, Concanavalin-A, MANGANESE (II) ION
Authors:Park, J.H, Park, Y.R, Lee, S.J.
Deposit date:2017-09-24
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Heterometal-Coordinated Monomeric Concanavalin A at pH 7.5 from Canavalia ensiformis
J. Microbiol. Biotechnol., 27, 2017
4XQT
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BU of 4xqt by Molmil
Crystal structure of human FPPS in complex with three magnesium ions
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
Authors:Park, J, Berghuis, A.M.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human FPPS in complex with three magnesium ions
To Be Published
4XQS
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BU of 4xqs by Molmil
Crystal structure of human FPPS in complex with one magnesium ion
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
Authors:Park, J, Berghuis, A.M.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human FPPS in complex with one magnesium ion
To Be Published
5XIX
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BU of 5xix by Molmil
The canonical domain of human asparaginyl-tRNA synthetase
Descriptor: Asparagine--tRNA ligase, cytoplasmic, GLYCEROL
Authors:Park, J.S, Han, B.W.
Deposit date:2017-04-28
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Unique N-terminal extension domain of human asparaginyl-tRNA synthetase elicits CCR3-mediated chemokine activity.
Int. J. Biol. Macromol., 120, 2018
6AHG
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BU of 6ahg by Molmil
Trimeric structure of concanavalin A from Canavalia ensiformis
Descriptor: CADMIUM ION, CALCIUM ION, Concanavalin-A,Concanavalin-A
Authors:Park, J.H, Kim, D.S, Park, Y.R, Lee, S.J.
Deposit date:2018-08-18
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Cadmium-substituted concanavalin A and its trimeric complexation
J. Microbiol. Biotechnol., 28(12), 2018
4GO6
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BU of 4go6 by Molmil
Crystal structure of HCF-1 self-association sequence 1
Descriptor: HCF C-terminal chain 1, HCF N-terminal chain 1, SULFATE ION
Authors:Park, J, Lammers, F, Herr, W, Song, J.
Deposit date:2012-08-18
Release date:2012-10-17
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:HCF-1 self-association via an interdigitated Fn3 structure facilitates transcriptional regulatory complex formation
Proc.Natl.Acad.Sci.USA, 109, 2012
4DEM
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BU of 4dem by Molmil
Crystal structure of human FPPS in complex with YS_04_70
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({4-[4-(propan-2-yloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)
Authors:Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2012-01-20
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and Synthesis of Active Site Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Apoptosis and Inhibition of ERK Phosphorylation in Multiple Myeloma Cells.
J.Med.Chem., 55, 2012
6K1D
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BU of 6k1d by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mn and GMP
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MANGANESE (II) ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K1C
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BU of 6k1c by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mg and dGMP
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MAGNESIUM ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K18
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BU of 6k18 by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mn
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MANGANESE (II) ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K1A
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BU of 6k1a by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mn and Mg
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MAGNESIUM ION, MANGANESE (II) ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K19
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BU of 6k19 by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mg
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MAGNESIUM ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
5TUI
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BU of 5tui by Molmil
Crystal structure of tetracycline destructase Tet(50) in complex with chlortetracycline
Descriptor: 7-CHLOROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUE
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BU of 5tue by Molmil
Crystal structure of tetracycline destructase Tet(50)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Tetracycline destructase Tet(50)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-05
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
7N1J
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BU of 7n1j by Molmil
Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder
Descriptor: Binder, Fibroblast growth factor receptor 4
Authors:Park, J.S, Lee, S.
Deposit date:2021-05-27
Release date:2022-04-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Design of protein-binding proteins from the target structure alone.
Nature, 605, 2022
7N1K
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BU of 7n1k by Molmil
Crystal structure of a de novo-designed mini-protein targeting FGFR
Descriptor: Binder
Authors:Park, J.S, Lee, S.
Deposit date:2021-05-27
Release date:2022-04-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Design of protein-binding proteins from the target structure alone.
Nature, 605, 2022
5TUK
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BU of 5tuk by Molmil
Crystal structure of tetracycline destructase Tet(51)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Tetracycline destructase Tet(51)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
7SVU
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BU of 7svu by Molmil
TnsBctd-TnsC-TniQ complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (28-MER), DNA (29-MER), ...
Authors:Park, J, Tsai, A.W.T, Kellogg, E.H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2023-02-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the holo CRISPR RNA-guided transposon integration complex
Nature, 613, 2023
5TUF
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BU of 5tuf by Molmil
Crystal structure of tetracycline destructase Tet(50) in complex with anhydrotetracycline
Descriptor: 5A,6-ANHYDROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5C3Y
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BU of 5c3y by Molmil
Structure of human ribokinase crystallized with AMPPNP
Descriptor: AMP PHOSPHORAMIDATE, Ribokinase, SODIUM ION
Authors:Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
Deposit date:2015-06-17
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of human ribokinase crystallized with AMPPNP
To Be Published
4MEZ
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BU of 4mez by Molmil
Crystal structure of M68L/M69T double mutant TEM-1
Descriptor: Beta-lactamase TEM, CHLORIDE ION, GLYCEROL, ...
Authors:Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
Deposit date:2013-08-27
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:The Structural Dynamics of Engineered beta-Lactamases Vary Broadly on Three Timescales yet Sustain Native Function.
Sci Rep, 9, 2019
4H5C
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BU of 4h5c by Molmil
Crystal structure of human FPPS in ternary complex with YS0470 and inorganic phosphate
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2012-09-18
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure.
Bmc Struct.Biol., 12, 2012
4H5E
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BU of 4h5e by Molmil
Crystal structure of human FPPS in ternary complex with YS0470 and isopentenyl pyrophosphate
Descriptor: Farnesyl pyrophosphate synthase, ISOPENTYL PYROPHOSPHATE, MAGNESIUM ION, ...
Authors:Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2012-09-18
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure.
Bmc Struct.Biol., 12, 2012

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