Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3C8F
DownloadVisualize
BU of 3c8f by Molmil
4Fe-4S-Pyruvate formate-lyase Activating Enzyme with partially disordered AdoMet
Descriptor: IRON/SULFUR CLUSTER, Pyruvate formate-lyase 1-activating enzyme, TRIETHYLENE GLYCOL, ...
Authors:Vey, J.L, Drennan, C.L.
Deposit date:2008-02-11
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BYT
DownloadVisualize
BU of 3byt by Molmil
A complex between a variant of staphylococcal enterotoxin C3 and the variable domain of the murine T cell receptor beta chain 8.2
Descriptor: Enterotoxin type C-3, T cell receptor beta chain 8.2
Authors:Cho, S, Eric, J.S.
Deposit date:2008-01-16
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
To be Published
3BVZ
DownloadVisualize
BU of 3bvz by Molmil
Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
Descriptor: Enterotoxin type C-3, ZINC ION
Authors:Cho, S.
Deposit date:2008-01-07
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
To be Published
3E5A
DownloadVisualize
BU of 3e5a by Molmil
Crystal structure of Aurora A in complex with VX-680 and TPX2
Descriptor: CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, SULFATE ION, Serine/threonine-protein kinase 6, ...
Authors:Zhao, B, Smallwood, A, Lai, Z.
Deposit date:2008-08-13
Release date:2008-10-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modulation of kinase-inhibitor interactions by auxiliary protein binding: crystallography studies on Aurora A interactions with VX-680 and with TPX2.
Protein Sci., 17, 2008
2GYD
DownloadVisualize
BU of 2gyd by Molmil
Complex of equine apoferritin with the H-diaziflurane photolabeling reagent
Descriptor: 2-(1,1-DIFLUOROETHOXY)-1,1,1-TRIFLUOROETHANE, CADMIUM ION, ferritin L subunit
Authors:Loll, P.J, Rossi, M.J, Eckenhoff, R.
Deposit date:2006-05-09
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Photoactive analogues of the haloether anesthetics provide high-resolution features from low-affinity interactions.
Acs Chem.Biol., 1, 2006
4ZHQ
DownloadVisualize
BU of 4zhq by Molmil
Crystal structure of Tubulin-Stathmin-TTL-MMAE Complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Wang, Y, Zhang, R.
Deposit date:2015-04-26
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Insights into the Pharmacophore of Vinca Domain Inhibitors of Microtubules
Mol.Pharmacol., 89, 2016
4ZI7
DownloadVisualize
BU of 4zi7 by Molmil
CRYSTAL STRUCTURE OF TUBULIN-STATHMIN-TTL-HTI286 COMPLEX
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Wang, Y, Zhang, R.
Deposit date:2015-04-27
Release date:2016-07-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural Insights into the Pharmacophore of Vinca Domain Inhibitors of Microtubules
Mol.Pharmacol., 89, 2016
4ZOL
DownloadVisualize
BU of 4zol by Molmil
Crystal Structure of Tubulin-Stathmin-TTL-Tubulysin M Complex
Descriptor: (2R,4R)-4-{[(2-{(1R,3R)-1-(acetyloxy)-4-methyl-3-[methyl(N-{[(2S)-1-methylpiperidin-2-yl]carbonyl}-D-isoleucyl)amino]pentyl}-1,3-thiazol-4-yl)carbonyl]amino}-2-methyl-5-phenylpentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wang, Y, Zhang, R.
Deposit date:2015-05-06
Release date:2016-07-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into the Pharmacophore of Vinca Domain Inhibitors of Microtubules
Mol.Pharmacol., 89, 2016
5BMV
DownloadVisualize
BU of 5bmv by Molmil
CRYSTAL STRUCTURE OF TUBULIN-STATHMIN-TTL-Vinblastine COMPLEX
Descriptor: (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wang, Y, Chen, Q, Zhang, R.
Deposit date:2015-05-23
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into the Pharmacophore of Vinca Domain Inhibitors of Microtubules.
Mol.Pharmacol., 89, 2016
6LHU
DownloadVisualize
BU of 6lhu by Molmil
High resolution structure of FANCA C-terminal domain (CTD)
Descriptor: Fanconi anemia complementation group A
Authors:Jeong, E, Lee, S, Shin, J, Kim, Y, Kim, J, Scharer, O, Kim, Y, Kim, H, Cho, Y.
Deposit date:2019-12-10
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural basis of the fanconi anemia-associated mutations within the FANCA and FANCG complex.
Nucleic Acids Res., 48, 2020
6LHW
DownloadVisualize
BU of 6lhw by Molmil
Structure of N-terminal and C-terminal domains of FANCA
Descriptor: Fanconi anemia complementation group A
Authors:Jeong, E, Lee, S, Shin, J, Kim, Y, Kim, J, Scharer, O, Kim, Y, Kim, H, Cho, Y.
Deposit date:2019-12-10
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.84 Å)
Cite:Structural basis of the fanconi anemia-associated mutations within the FANCA and FANCG complex.
Nucleic Acids Res., 48, 2020
3VWB
DownloadVisualize
BU of 3vwb by Molmil
Crystal structure of VirB core domain (Se-Met derivative) complexed with the cis-acting site (5-BRU modifications) upstream icsb promoter
Descriptor: DNA (26-MER), Virulence regulon transcriptional activator virB
Authors:Gao, X.P, Waltersperger, S, Wang, M.T, Cui, S.
Deposit date:2012-08-21
Release date:2013-08-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.416 Å)
Cite:Structural insights into VirB-DNA complexes reveal mechanism of transcriptional activation of virulence genes
Nucleic Acids Res., 41, 2013
6D88
DownloadVisualize
BU of 6d88 by Molmil
Tubulin-RB3_SLD-TTL in complex with compound 13f
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2018-04-26
Release date:2018-09-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.853 Å)
Cite:Structural Modification of the 3,4,5-Trimethoxyphenyl Moiety in the Tubulin Inhibitor VERU-111 Leads to Improved Antiproliferative Activities.
J. Med. Chem., 61, 2018
3W2A
DownloadVisualize
BU of 3w2a by Molmil
Crystal structure of VirB core domain complexed with the cis-acting site upstream icsp promoter
Descriptor: DNA (31-mer), Virulence regulon transcriptional activator VirB
Authors:Gao, X.P, Waltersperger, S, Wang, M.T, Cui, S.
Deposit date:2012-11-27
Release date:2013-09-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.775 Å)
Cite:Structural insights into VirB-DNA complexes reveal mechanism of transcriptional activation of virulence genes
Nucleic Acids Res., 41, 2013
3W3C
DownloadVisualize
BU of 3w3c by Molmil
Crystal structure of VirB core domain complexed with the cis-acting site upstream icsb promoter
Descriptor: DNA (26-MER), Virulence regulon transcriptional activator VirB
Authors:Gao, X.P, Waltersperger, S, Wang, M.T, Cui, S.
Deposit date:2012-12-19
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:Structural insights into VirB-DNA complexes reveal mechanism of transcriptional activation of virulence genes
Nucleic Acids Res., 41, 2013
7Y9N
DownloadVisualize
BU of 7y9n by Molmil
an engineered 5-helix bundle derived from SARS-CoV-2 S2 in complex with HR2P
Descriptor: SARS-coV-2 S2 subunit, Spike protein S2',5HB-H2
Authors:Lu, G.W, Lin, X, Guo, L.Y, Lin, S.
Deposit date:2022-06-25
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.885 Å)
Cite:An engineered 5-helix bundle derived from SARS-CoV-2 S2 pre-binds sarbecoviral spike at both serological- and endosomal-pH to inhibit virus entry.
Emerg Microbes Infect, 11, 2022
7PSE
DownloadVisualize
BU of 7pse by Molmil
Crystal Structure of a Class D Carbapenemase_K73ALY Complexed with Oxacillin
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, 1-BUTANOL, Beta-lactamase, ...
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-09-23
Release date:2022-10-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7PSF
DownloadVisualize
BU of 7psf by Molmil
Crystal Structure of a Class D Carbapenemase Complexed with Imipenem
Descriptor: 1-BUTANOL, BROMIDE ION, Beta-lactamase, ...
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-09-23
Release date:2022-10-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7Q14
DownloadVisualize
BU of 7q14 by Molmil
Crystal Structure of a Class D Carbapenemase_K73ALY Complexed with Imipenem
Descriptor: 1-BUTANOL, BROMIDE ION, Beta-lactamase, ...
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-10-18
Release date:2022-11-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
8K14
DownloadVisualize
BU of 8k14 by Molmil
X-ray crystal structure of 18a in BRD4(1)
Descriptor: 4-[8-methoxy-2-methyl-1-(1-phenylethyl)imidazo[4,5-c]quinolin-7-yl]-3,5-dimethyl-1,2-oxazole, Bromodomain-containing protein 4
Authors:Xu, H, Shen, H, Zhang, Y, Xu, Y, Li, R.
Deposit date:2023-07-10
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Discovery of (R)-4-(8-methoxy-2-methyl-1-(1-phenylethy)-1H-imidazo[4,5-c]quinnolin-7-yl)-3,5-dimethylisoxazole as a potent and selective BET inhibitor for treatment of acute myeloid leukemia (AML) guided by FEP calculation.
Eur.J.Med.Chem., 263, 2024
8QNZ
DownloadVisualize
BU of 8qnz by Molmil
Crystal Structure of a Class D Carbapenemase Complexed with Hydrolyzed Imipenem
Descriptor: (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid, 1-BUTANOL, BROMIDE ION, ...
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2023-09-27
Release date:2023-11-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity.
Acs Cent.Sci., 9, 2023
8Q84
DownloadVisualize
BU of 8q84 by Molmil
Outer kinetochore Dam1 protomer dimer Ndc80-Nuf2 coiled-coil complex
Descriptor: DASH complex subunit ASK1, DASH complex subunit DAD1, DASH complex subunit DAD2, ...
Authors:Muir, K.W, Barford, D.
Deposit date:2023-08-17
Release date:2023-12-06
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural mechanism of outer kinetochore Dam1-Ndc80 complex assembly on microtubules.
Science, 382, 2023
8Q85
DownloadVisualize
BU of 8q85 by Molmil
Outer kinetochore Dam1 protomer monomer Ndc80-Nuf2 coiled-coil complex
Descriptor: DASH complex subunit ASK1, DASH complex subunit DAD1, DASH complex subunit DAD2, ...
Authors:Muir, K.W, Barford, D.
Deposit date:2023-08-17
Release date:2023-12-06
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structural mechanism of outer kinetochore Dam1-Ndc80 complex assembly on microtubules.
Science, 382, 2023
6LHS
DownloadVisualize
BU of 6lhs by Molmil
High resolution structure of FANCA C-terminal domain (CTD)
Descriptor: Fanconi anemia complementation group A
Authors:Jeong, E, Lee, S, Shin, J, Kim, Y, Scharer, O, Kim, Y, Kim, H, Cho, Y.
Deposit date:2019-12-10
Release date:2020-03-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural basis of the fanconi anemia-associated mutations within the FANCA and FANCG complex.
Nucleic Acids Res., 48, 2020
8PPR
DownloadVisualize
BU of 8ppr by Molmil
Structure of the human outer kinetochore KMN network complex
Descriptor: Kinetochore protein Spc24, Kinetochore protein Spc25, Kinetochore scaffold 1, ...
Authors:Yatskevich, S, Barford, D.
Deposit date:2023-07-08
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the human outer kinetochore KMN network complex.
Nat.Struct.Mol.Biol., 2024

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon