5DOQ
The structure of bd oxidase from Geobacillus thermodenitrificans
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Bd-type quinol oxidase subunit I | polymer | 448 | 50241.9 | 1 | UniProt (A4IKP6) Pfam (PF01654) In PDB | Geobacillus thermodenitrificans (strain NG80-2) | |
| 2 | B | Bd-type quinol oxidase subunit II | polymer | 342 | 39017.5 | 1 | UniProt (A4IKP7) Pfam (PF02322) In PDB | Geobacillus thermodenitrificans (strain NG80-2) | |
| 3 | C | Putative membrane protein | polymer | 33 | 3681.4 | 1 | UniProt (A0A0Q0UXS2) In PDB | Geobacillus sp. PA-3 | |
| 4 | A | HEME B/C | non-polymer | 618.5 | 2 | Chemie (HEB) | |||
| 5 | A | CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE | non-polymer | 632.5 | 1 | Chemie (HDD) |
Sequence modifications
A: 1 - 448 (UniProt: A4IKP6)
B: 1 - 342 (UniProt: A4IKP7)
| PDB | External Database | Details |
|---|---|---|
| Glu 123 | Lys 123 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Asn 146 | Ser 146 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 92940.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1869.5 | |
| All* | Total formula weight | 94810.3 |
