5DOQ
The structure of bd oxidase from Geobacillus thermodenitrificans
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0009055 | molecular_function | electron transfer activity |
| A | 0016682 | molecular_function | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor |
| A | 0019646 | biological_process | aerobic electron transport chain |
| A | 0020037 | molecular_function | heme binding |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0070069 | cellular_component | cytochrome complex |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0016020 | cellular_component | membrane |
| C | 0016020 | cellular_component | membrane |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 17 |
| Details | binding site for residue HEB A 501 |
| Chain | Residue |
| A | LYS183 |
| A | VAL326 |
| A | GLY329 |
| A | ALA366 |
| A | ALA369 |
| A | ILE370 |
| A | GLY373 |
| A | TRP374 |
| A | ALA377 |
| A | HIS186 |
| A | THR190 |
| A | GLY238 |
| A | SER241 |
| A | GLY242 |
| A | LEU245 |
| A | LYS252 |
| A | MET325 |
| site_id | AC2 |
| Number of Residues | 17 |
| Details | binding site for residue HEB A 502 |
| Chain | Residue |
| A | HIS21 |
| A | TYR24 |
| A | ALA25 |
| A | VAL65 |
| A | GLY68 |
| A | VAL69 |
| A | GLY72 |
| A | THR73 |
| A | ILE75 |
| A | GLY76 |
| A | GLU101 |
| A | THR102 |
| A | PHE105 |
| A | ILE146 |
| A | HDD503 |
| B | ASN60 |
| B | VAL61 |
| site_id | AC3 |
| Number of Residues | 16 |
| Details | binding site for residue HDD A 503 |
| Chain | Residue |
| A | ARG11 |
| A | GLU15 |
| A | LEU18 |
| A | THR19 |
| A | ILE22 |
| A | TRP83 |
| A | ILE146 |
| A | THR147 |
| A | ASN150 |
| A | MET153 |
| A | TRP374 |
| A | TYR375 |
| A | GLU378 |
| A | ARG381 |
| A | GLN382 |
| A | HEB502 |
