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4MEX

Crystal structure of Escherichia coli RNA polymerase in complex with salinamide A

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, G, HDNA-directed RNA polymerase subunit alphapolymer33537387.54UniProt (P0A7Z4)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
In PDB
Escherichia coliRNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha
2C, IDNA-directed RNA polymerase subunit betapolymer1342150820.92UniProt (P0A8V2)
Pfam (PF04560)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
In PDB
Escherichia coliRNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta
3D, JDNA-directed RNA polymerase subunit beta'polymer1407155366.82UniProt (P0A8T7)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
In PDB
Escherichia coliRNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'
4E, KDNA-directed RNA polymerase subunit omegapolymer9110249.52UniProt (P0A800)
Pfam (PF01192)
In PDB
Escherichia coliRNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega
5F, LRNA polymerase sigma factor RpoDpolymer61370352.22UniProt (P00579)
Pfam (PF03979)
Pfam (PF00140)
Pfam (PF04546)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
In PDB
Escherichia coliSigma-70
6M, NSalinamide Apolymer91056.22BIRD (PRD_001162)Streptomyces sp.
7D, JMAGNESIUM IONnon-polymer24.32Chemie (MG)
8D, JZINC IONnon-polymer65.44Chemie (ZN)
Sequence modifications
A, B, G, H: -5 - 329 (UniProt: P0A7Z4)
PDBExternal DatabaseDetails
His -4-EXPRESSION TAG
His -3-EXPRESSION TAG
His -2-EXPRESSION TAG
His -1-EXPRESSION TAG
His 0-EXPRESSION TAG
His 1-EXPRESSION TAG
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains14
Total formula weight925241.4
Non-Polymers*Number of molecules6
Total formula weight310.2
All*Total formula weight925551.7
*Water molecules are not included.

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PDB entries from 2024-04-24

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