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1SBX
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BU of 1sbx by Molmil
Crystal structure of the Dachshund-homology domain of human SKI
Descriptor: Ski oncogene
Authors:Wilson, J.J, Malakhova, M, Zhang, R, Joachimiak, A, Hegde, R.S.
Deposit date:2004-02-11
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of the Dachshund Homology Domain of human SKI
Structure, 12, 2004
1MR1
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BU of 1mr1 by Molmil
Crystal Structure of a Smad4-Ski Complex
Descriptor: Mothers against decapentaplegic homolog 4, Ski oncogene, ZINC ION
Authors:Wu, J.-W, Krawitz, A.R, Chai, J, Li, W, Zhang, F, Luo, K, Shi, Y.
Deposit date:2002-09-17
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Mechanism of Smad4 Recognition by the Nuclear Oncoprotein Ski: Insights on Ski-mediated Repression of TGF-beta Signaling
Cell(Cambridge,Mass.), 111, 2002
6ZVQ
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BU of 6zvq by Molmil
Complex between SMAD2 MH2 domain and peptide from Ski corepressor
Descriptor: D(-)-TARTARIC ACID, GLYCEROL, Mothers against decapentaplegic homolog 2, ...
Authors:Purkiss, A.G, Kjaer, S, George, R, Hill, C.S.
Deposit date:2020-07-27
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Mutations in SKI in Shprintzen-Goldberg syndrome lead to attenuated TGF-beta responses through SKI stabilization.
Elife, 10, 2021
3EQ5
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BU of 3eq5 by Molmil
Crystal structure of fragment 137 to 238 of the human Ski-like protein
Descriptor: Ski-like protein
Authors:Tresaugues, L, Wisniewska, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, Van Den Berg, S, Welin, M, Wikstrom, M, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2008-09-30
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of fragment 137 to 238 of the human Ski-like protein.
To be Published
7QE0
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BU of 7qe0 by Molmil
80S-bound human SKI complex in the open state
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
6DVR
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BU of 6dvr by Molmil
Crystal structure of human CARM1 with (R)-SKI-72
Descriptor: (2R,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-[(benzylamino)methyl]-N-[2-(4-methoxyphenyl)ethyl]hexanamide (non-preferred name), 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, Histone-arginine methyltransferase CARM1, ...
Authors:Dong, A, Zeng, H, Hutchinson, A, Seitova, A, Luo, M, Cai, X.C, Ke, W, Wang, J, Shi, C, Zheng, W, Lee, J.P, Ibanez, G, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2018-06-25
Release date:2018-07-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of human CARM1 with (R)-SKI-72
to be published
5XOD
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BU of 5xod by Molmil
Crystal structure of human Smad2-Ski complex
Descriptor: Mothers against decapentaplegic homolog 2, Ski oncogene
Authors:Miyazono, K, Moriwaki, S, Ito, T, Tanokura, M.
Deposit date:2017-05-27
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Hydrophobic patches on SMAD2 and SMAD3 determine selective binding to cofactors
Sci Signal, 11, 2018
7QDS
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BU of 7qds by Molmil
Apo human SKI complex in the open state
Descriptor: Helicase SKI2W, Tetratricopeptide repeat protein 37, WD repeat-containing protein 61
Authors:Koegel, A, Keidel, A, Bonneau, A, Schaefer, I.B, Conti, E.
Deposit date:2021-11-30
Release date:2022-02-02
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
7QDR
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BU of 7qdr by Molmil
Apo human SKI complex in the closed state
Descriptor: Helicase SKI2W, Tetratricopeptide repeat protein 37, WD repeat-containing protein 61
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-11-29
Release date:2022-02-02
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
7QDZ
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BU of 7qdz by Molmil
80S-bound human SKI complex in the closed state
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), Tetratricopeptide repeat protein 37, ...
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
7QDY
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BU of 7qdy by Molmil
RNA-bound human SKI complex
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), Tetratricopeptide repeat protein 37, ...
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
5C4V
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BU of 5c4v by Molmil
Ski-like protein
Descriptor: GLYCEROL, Mothers against decapentaplegic homolog 4, NICKEL (II) ION, ...
Authors:Wallden, K, Nyman, T, Hallberg, B.M.
Deposit date:2015-06-18
Release date:2016-10-12
Last modified:2017-04-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:SnoN Stabilizes the SMAD3/SMAD4 Protein Complex.
Sci Rep, 7, 2017
4BUJ
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BU of 4buj by Molmil
Crystal structure of the S. cerevisiae Ski2-3-8 complex
Descriptor: ANTIVIRAL HELICASE SKI2, ANTIVIRAL PROTEIN SKI8, SULFATE ION, ...
Authors:Halbach, F, Reichelt, P, Rode, M, Conti, E.
Deposit date:2013-06-20
Release date:2013-08-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The Yeast Ski Complex: Crystal Structure and RNA Channeling to the Exosome Complex.
Cell(Cambridge,Mass.), 154, 2013
2MIU
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BU of 2miu by Molmil
Structure of FHL2 LIM adaptor and its Interaction with Ski
Descriptor: Four and a half LIM domains protein 2, ZINC ION
Authors:Yang, Y, Sun, Y, Medrano, E.E, Tian, X, Weiss, M.A.
Deposit date:2013-12-20
Release date:2014-01-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of FHL2 LIM adaptor and its Interaction with Ski
To be Published
8SSN
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BU of 8ssn by Molmil
Abl kinase in complex with SKI and asciminib
Descriptor: 6,7-dimethoxy-N-(4-phenoxyphenyl)quinazolin-4-amine, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Ludewig, H, Kim, C, Kern, D.
Deposit date:2023-05-08
Release date:2023-09-06
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:A biophysical framework for double-drugging kinases.
Proc.Natl.Acad.Sci.USA, 120, 2023
6D2L
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BU of 6d2l by Molmil
Crystal structure of human CARM1 with (S)-SKI-72
Descriptor: (2S,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-[(benzylamino)methyl]-N-[2-(4-hydroxyphenyl)ethyl]hexanamide, GLYCEROL, Histone-arginine methyltransferase CARM1, ...
Authors:DONG, A, ZENG, H, WALKER, J.R, Hutchinson, A, Seitova, A, LUO, M, CAI, X.C, KE, W, WANG, J, SHI, C, ZHENG, W, LEE, J.P, IBANEZ, G, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
Deposit date:2018-04-13
Release date:2018-05-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:A chemical probe of CARM1 alters epigenetic plasticity against breast cancer cell invasion.
Elife, 8, 2019
5MC6
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BU of 5mc6 by Molmil
Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Schmidt, C, Kowalinski, E, Shanmuganathan, V, Defenouillere, Q, Braunger, K, Heuer, A, Pech, M, Namane, A, Berninghausen, O, Fromont-Racine, M, Jacquier, A, Conti, E, Becker, T, Beckmann, R.
Deposit date:2016-11-09
Release date:2017-01-18
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The cryo-EM structure of a ribosome-Ski2-Ski3-Ski8 helicase complex.
Science, 354, 2016
4PV3
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BU of 4pv3 by Molmil
Crystal structure of potassium-dependent plant-type L-asparaginase from Phaseolus vulgaris in complex with Na+ cations
Descriptor: L-ASPARAGINASE ALPHA SUBUNIT, L-ASPARAGINASE BETA SUBUNIT, SODIUM ION
Authors:Bejger, M, Gilski, M, Imiolczyk, B, Jaskolski, M.
Deposit date:2014-03-14
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Na+/K+ exchange switches the catalytic apparatus of potassium-dependent plant L-asparaginase
Acta Crystallogr.,Sect.D, 70, 2014
4PV2
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BU of 4pv2 by Molmil
Crystal structure of potassium-dependent plant-type L-asparaginase from Phaseolus vulgaris in complex with K+ and Na+ cations
Descriptor: L-ASPARAGINASE ALPHA SUBUNIT, L-ASPARAGINASE BETA SUBUNIT, NITRATE ION, ...
Authors:Bejger, M, Gilski, M, Imiolczyk, B, Clavel, D, Jaskolski, M.
Deposit date:2014-03-14
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Na+/K+ exchange switches the catalytic apparatus of potassium-dependent plant L-asparaginase
Acta Crystallogr.,Sect.D, 70, 2014
5I9X
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BU of 5i9x by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with bosutinib (SKI-606)
Descriptor: 1,2-ETHANEDIOL, 4-[(2,4-dichloro-5-methoxyphenyl)amino]-6-methoxy-7-[3-(4-methylpiperazin-1-yl)propoxy]quinoline-3-carbonitrile, Ephrin type-A receptor 2
Authors:Kudlinzki, D, Linhard, V.L, Gande, S.L, Sreeramulu, S, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
Deposit date:2016-02-21
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.427 Å)
Cite:Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.
ACS Chem. Biol., 11, 2016
1S4U
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BU of 1s4u by Molmil
Crystal Structure analysis of the beta-propeller protein Ski8p
Descriptor: Antiviral protein SKI8
Authors:Cheng, Z, Song, H.
Deposit date:2004-01-18
Release date:2004-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Ski8p, a WD-repeat protein with dual roles in mRNA metabolism and meiotic recombination
Protein Sci., 13, 2004
1MJS
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BU of 1mjs by Molmil
MH2 domain of transcriptional factor SMAD3
Descriptor: SMAD 3
Authors:Qin, B.Y, Lam, S.S, Correia, J.J, Lin, K.
Deposit date:2002-08-28
Release date:2002-10-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Smad3 allostery links TGF-beta receptor kinase activation to transcriptional control
Genes Dev., 16, 2002
1MK2
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BU of 1mk2 by Molmil
SMAD3 SBD complex
Descriptor: ACETIC ACID, Madh-interacting protein, SMAD 3
Authors:Qin, B.Y, Lam, S.S, Correia, J.J, Lin, K.
Deposit date:2002-08-28
Release date:2002-10-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Smad3 allostery links TGF-beta receptor kinase activation to transcriptional control
Genes Dev., 16, 2002
5Y5U
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BU of 5y5u by Molmil
Crystal structures of spleen tyrosine kinase in complex with a novel inhibitor
Descriptor: 4-[(1-methylindazol-5-yl)amino]-2-(4-oxidanylpiperidin-1-yl)-8H-pyrido[4,3-d]pyrimidin-5-one, Tyrosine-protein kinase SYK
Authors:Lee, S.J, Lee, B.I.
Deposit date:2017-08-09
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal Structures of Spleen Tyrosine Kinase in Complex with Two Novel 4-Aminopyrido[4,3-d] Pyrimidine Derivative Inhibitors.
Mol. Cells, 41, 2018
5Y5T
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BU of 5y5t by Molmil
Crystal structures of spleen tyrosine kinase in complex with a novel inhibitor
Descriptor: 2-[[(1S,2S)-2-azanylcyclohexyl]amino]-4-[(4-methylsulfonylphenyl)amino]-6H-pyrido[4,3-d]pyrimidin-5-one, Tyrosine-protein kinase SYK
Authors:Lee, S.J, Lee, B.I.
Deposit date:2017-08-09
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Spleen Tyrosine Kinase in Complex with Two Novel 4-Aminopyrido[4,3-d] Pyrimidine Derivative Inhibitors.
Mol. Cells, 41, 2018

 

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