Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003824 | molecular_function | catalytic activity |
A | 0004518 | molecular_function | nuclease activity |
A | 0004519 | molecular_function | endonuclease activity |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue DMS A 401 |
Chain | Residue |
A | ASN174 |
A | ALA230 |
A | TRP280 |
A | LEU282 |
A | HOH606 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue DMS A 402 |
Chain | Residue |
A | PHE162 |
A | ASP163 |
A | GLN137 |
A | ALA138 |
A | PRO139 |
A | LEU140 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue EDO A 403 |
Chain | Residue |
A | HIS215 |
A | GLU216 |
A | ARG237 |
A | GLN238 |
A | GLN238 |
A | GLY241 |
site_id | AC4 |
Number of Residues | 7 |
Details | binding site for residue EDO A 404 |
Chain | Residue |
A | TYR45 |
A | TRP267 |
A | ARG274 |
A | ASN277 |
A | SER302 |
A | LYS303 |
A | HOH580 |
site_id | AC5 |
Number of Residues | 7 |
Details | binding site for residue EDO A 405 |
Chain | Residue |
A | LYS78 |
A | TYR269 |
A | ARG274 |
A | LEU305 |
A | GLY306 |
A | SER307 |
A | HOH732 |
Functional Information from PROSITE/UniProt
site_id | PS00726 |
Number of Residues | 10 |
Details | AP_NUCLEASE_F1_1 AP endonucleases family 1 signature 1. PDILCLQETK |
Chain | Residue | Details |
A | PRO89-LYS98 | |
site_id | PS00727 |
Number of Residues | 17 |
Details | AP_NUCLEASE_F1_2 AP endonucleases family 1 signature 2. DSFRHlypntpyaYTFW |
Chain | Residue | Details |
A | ASP251-TRP267 | |
site_id | PS00728 |
Number of Residues | 12 |
Details | AP_NUCLEASE_F1_3 AP endonucleases family 1 signature 3. NvGwRLDYfLlS |
Chain | Residue | Details |
A | ASN277-SER288 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | TYR171 | |
Chain | Residue | Details |
A | ASP210 | |
Chain | Residue | Details |
A | HIS309 | |
Chain | Residue | Details |
A | ASN68 | |
A | GLU96 | |
A | ASP210 | |
A | ASN212 | |
A | ASP308 | |
A | HIS309 | |
Chain | Residue | Details |
A | ASN212 | |
Chain | Residue | Details |
A | ASP283 | |
site_id | SWS_FT_FI7 |
Number of Residues | 1 |
Details | SITE: Interaction with DNA substrate |
Chain | Residue | Details |
A | HIS309 | |
Chain | Residue | Details |
A | SER54 | |
Chain | Residue | Details |
A | CYS65 | |
A | CYS93 | |
Chain | Residue | Details |
A | LYS197 | |
Chain | Residue | Details |
A | THR233 | |
Chain | Residue | Details |
A | CYS310 | |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 8 |
Details | M-CSA 510 |
Chain | Residue | Details |
A | ASP70 | metal ligand |
A | GLU96 | metal ligand |
A | TYR171 | electrostatic stabiliser, metal ligand |
A | ASP210 | increase nucleophilicity, metal ligand, proton acceptor |
A | ASN212 | |
A | ASP283 | electrostatic stabiliser |
A | ASP308 | metal ligand |
A | HIS309 | electrostatic stabiliser, metal ligand |