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1YHM

Structure of the complex of Trypanosoma cruzi farnesyl disphosphate synthase with alendronate, Isopentenyl diphosphate and mg+2

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
B0004659molecular_functionprenyltransferase activity
B0008299biological_processisoprenoid biosynthetic process
B0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
C0004659molecular_functionprenyltransferase activity
C0008299biological_processisoprenoid biosynthetic process
C0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 401
ChainResidue
AASP250
AAHD901
AHOH905
AHOH906

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH903
AASP98
AASP102
AMG403
AAHD901
AHOH902

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 403
ChainResidue
AASP98
AASP102
AASP170
AMG402
AAHD901
AHOH904
AHOH907

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 370
ChainResidue
AHIS141
BLYS158

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 1370
ChainResidue
BGLN21
BHIS141

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 2370
ChainResidue
CGLN21
CHIS141

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1401
ChainResidue
BASP250
BAHD1901
BHOH1906
BHOH1907
BHOH1909

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1402
ChainResidue
BASP98
BASP102
BMG1403
BAHD1901
BHOH1903
BHOH1904

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MG B 1403
ChainResidue
BASP98
BASP102
BASP170
BMG1402
BAHD1901
BHOH1902
BHOH1905
BHOH1908

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG C 2401
ChainResidue
CASP250
CAHD2901
CHOH2906
CHOH2907
CHOH2909

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 2402
ChainResidue
CASP98
CASP102
CMG2403
CAHD2901
CHOH2903
CHOH2904

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG C 2403
ChainResidue
CASP98
CASP102
CMG2402
CAHD2901
CHOH2902
CHOH2905
CHOH2908

site_idBC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE AHD A 901
ChainResidue
AASP98
AASP102
AARG107
ALYS207
ATYR211
AGLN247
AASP250
ALYS264
AMG401
AMG402
AMG403
AIPE900
AHOH902
AHOH903
AHOH904
AHOH905
AHOH906

site_idBC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE IPE A 900
ChainResidue
AGLY47
ALYS48
AARG51
AGLN91
AARG108
ATHR208
ATYR211
APHE246
ALYS362
AAHD901

site_idBC6
Number of Residues18
DetailsBINDING SITE FOR RESIDUE AHD B 1901
ChainResidue
BHOH1902
BHOH1904
BHOH1905
BHOH1906
BHOH1907
BHOH1909
BASP98
BASP102
BARG107
BLYS207
BTYR211
BGLN247
BASP250
BLYS264
BMG1401
BMG1402
BMG1403
BIPE1900

site_idBC7
Number of Residues14
DetailsBINDING SITE FOR RESIDUE IPE B 1900
ChainResidue
BGLY47
BLYS48
BARG51
BGLN91
BARG108
BTHR208
BTYR211
BPHE246
BASP250
BLYS362
BAHD1901
BHOH1924
BHOH1932
BHOH1943

site_idBC8
Number of Residues18
DetailsBINDING SITE FOR RESIDUE AHD C 2901
ChainResidue
CASP98
CASP102
CARG107
CGLN167
CLYS207
CGLN247
CASP250
CLYS264
CMG2401
CMG2402
CMG2403
CIPE2900
CHOH2902
CHOH2904
CHOH2905
CHOH2906
CHOH2907
CHOH2909

site_idBC9
Number of Residues11
DetailsBINDING SITE FOR RESIDUE IPE C 2900
ChainResidue
CGLY47
CLYS48
CARG51
CGLN91
CARG108
CTHR208
CPHE246
CGLN247
CASP250
CLYS362
CAHD2901

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. IGeyFQVqDDVmD
ChainResidueDetails
AILE242-ASP254

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVeDDim..DgsvmRRG
ChainResidueDetails
ALEU95-GLY109

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1fps
ChainResidueDetails
AARG107
APHE246

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1fps
ChainResidueDetails
BARG107
BPHE246

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1fps
ChainResidueDetails
CARG107
CPHE246

225158

PDB entries from 2024-09-18

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