Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8F6M

Complex of Rabbit muscle pyruvate kinase with ADP and the phosphonate analogue of PEP mimicking the Michaelis complex.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyCCD
Collection date2008-11-12
DetectorADSC QUANTUM 315
Wavelength(s)0.9
Spacegroup nameP 21 21 21
Unit cell lengths93.026, 216.396, 258.151
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.020 - 2.150
R-factor0.1584
Rwork0.156
R-free0.20470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2g50
RMSD bond length0.013
RMSD bond angle1.112
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0002.230
High resolution limit [Å]2.1504.6302.150
Rmerge0.1270.0460.583
Total number of observations2026691
Number of reflections5453135445854585
<I/σ(I)>7.9
Completeness [%]100.099.8100
Redundancy3.73.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629815 mM succinate, 50 mM KCl, 19 to 24% PEG 8,000 well solution

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon