8CTZ
12-mer DNA structure of ExBIM & O6Me-G bound to RNase-H
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-07-11 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.97856 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.506, 66.492, 69.182 |
Unit cell angles | 90.00, 107.97, 90.00 |
Refinement procedure
Resolution | 29.740 - 2.320 |
R-factor | 0.1988 |
Rwork | 0.195 |
R-free | 0.26510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3EY1 (Protein alone) |
RMSD bond length | 0.008 |
RMSD bond angle | 1.043 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.750 | 2.360 |
High resolution limit [Å] | 2.320 | 2.320 |
Rmerge | 0.121 | 0.620 |
Rpim | 0.062 | |
Number of reflections | 22274 | 1062 |
<I/σ(I)> | 14.63 | 1.8 |
Completeness [%] | 99.4 | 95.7 |
Redundancy | 4.9 | 4.3 |
CC(1/2) | 0.808 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 0.1 M HEPES, 10% v/v 2-propanol and 20% w/v PEG 4000 |