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6FS7

Influenza A/California/04/2009 (pH1N1) endonuclease with I38T mutation with bound inhibitor, baloxavir acid (BXA)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-18
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.966
Spacegroup nameP 21 21 2
Unit cell lengths135.680, 75.560, 121.800
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution90.637 - 1.960
R-factor0.189
Rwork0.188
R-free0.21140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB:4AWK
RMSD bond length0.004
RMSD bond angle0.799
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.6372.010
High resolution limit [Å]1.9601.960
Rmerge0.596
Number of reflections942546540
<I/σ(I)>17.42.2
Completeness [%]99.499.7
Redundancy4.14
CC(1/2)0.9940.767
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293Protein, at 15-17 mg/ml, was incubated with 10-fold molar excess of BXA for 30 min at RT, mixtures were centrifuged at RT for 5 minutes at 12000 g, and soluble fraction was used for crystallization trials (final protein concentration 8-10 mg/ml). Mother liquor was 0.2 M (NH4)2SO4, 0.1 M Na(CH3)2AsO2 pH 6.5, 30% (w/v) PEG8000

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