5K33
Crystal structure of extracellular domain of HER2 in complex with Fcab STAB19
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-27 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 108.620, 108.620, 174.340 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.034 - 3.300 |
R-factor | 0.222 |
Rwork | 0.217 |
R-free | 0.27120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jih 1n8z |
RMSD bond length | 0.004 |
RMSD bond angle | 0.671 |
Data reduction software | XDS (XDS v.Oct-2015) |
Data scaling software | XDS (XDS v.Oct-2015) |
Phasing software | PHENIX (1.10-2247) |
Refinement software | BUSTER (Snapshot v.20150616) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.034 | 3.418 |
High resolution limit [Å] | 3.300 | 3.300 |
Rmerge | 0.142 | 1.652 |
Number of reflections | 18446 | |
<I/σ(I)> | 9.99 | 1.06 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.6 | 6.7 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 295 | 0.05 M MES, 10% w/v PEG3350 |