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1C7S

BETA-N-ACETYLHEXOSAMINIDASE MUTANT D539A COMPLEXED WITH DI-N-ACETYL-BETA-D-GLUCOSAMINE (CHITOBIASE)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1999-04-04
DetectorMARRESEARCH
Spacegroup nameP 21 21 2
Unit cell lengths108.794, 99.960, 86.308
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 1.800
R-factor0.183
Rwork0.171
R-free0.22400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1qbb
RMSD bond length0.022

*

RMSD bond angle0.024
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (/ ARP)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0001.860
High resolution limit [Å]1.8001.800
Rmerge0.0240.095
Total number of observations937195

*

Number of reflections76047
<I/σ(I)>328324738
Completeness [%]86.9

*

90.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.8CO-CRYSTALS WERE GROWN BY THE HANGING-DROP VAPOR DIFFUSION METHOD. RESERVOIR BUFFER CONTAINED 2.3 MOLAR AMMONIUM SULFATE AND 100 MILLIMOLAR CACODYLATE BUFFER PH 4.8. PROTEIN SOLUTION 40 MILLIGRAM PER MILLILITER WAS MIXED WITH AN EQUAL VOLUME OF RESERVOIR CONTAINING 10 MILLIMOLAR DI-NAG. CRYSTALS ABOUT 0.5 X 0.2 X 0.2 MILLIMETER IN SIZE WERE FORMED WITHIN 2-3 DAYS., VAPOR DIFFUSION, HANGING DROP
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate2.3 (M)
21reservoircacodylate100 (mM)
31dropprotein40 (mg/ml)
41dropdiNAG10 (mM)

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PDB entries from 2024-05-01

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