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Yorodumi- PDB-1uua: Solution structure of a truncated bovine pancreatic trypsin inhib... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1uua | ||||||
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Title | Solution structure of a truncated bovine pancreatic trypsin inhibitor, 3-58 BPTI. | ||||||
Components | BOVINE PANCREATIC TRYPSIN INHIBITORAprotinin | ||||||
Keywords | INHIBITOR / SERINE PROTEASE INHIBITOR / PHARMACEUTICAL / 3D-STRUCT | ||||||
Function / homology | Function and homology information trypsinogen activation / negative regulation of serine-type endopeptidase activity / sulfate binding / potassium channel inhibitor activity / negative regulation of platelet aggregation / zymogen binding / molecular function inhibitor activity / negative regulation of thrombin-activated receptor signaling pathway / serine protease inhibitor complex / serine-type endopeptidase inhibitor activity ...trypsinogen activation / negative regulation of serine-type endopeptidase activity / sulfate binding / potassium channel inhibitor activity / negative regulation of platelet aggregation / zymogen binding / molecular function inhibitor activity / negative regulation of thrombin-activated receptor signaling pathway / serine protease inhibitor complex / serine-type endopeptidase inhibitor activity / protease binding / calcium ion binding / extracellular space Similarity search - Function | ||||||
Biological species | BOS TAURUS (cattle) | ||||||
Method | SOLUTION NMR / distance geometry | ||||||
Authors | Zhang, W. / Nielsen, C.B. / Hansen, P.E. | ||||||
Citation | Journal: To be Published Title: NMR Solution Structures of Modifies and Truncated Bovine Pancreatic Trypsin Inhibitor Proteins (3-58 Bpti'S) Authors: Zhang, W. / Nielsen, C.B. / Hansen, P.E. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1uua.cif.gz | 331.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1uua.ent.gz | 286.8 KB | Display | PDB format |
PDBx/mmJSON format | 1uua.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/uu/1uua ftp://data.pdbj.org/pub/pdb/validation_reports/uu/1uua | HTTPS FTP |
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-Related structure data
Related structure data | |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 6273.259 Da / Num. of mol.: 1 / Fragment: PANCREATIC TRYPSIN INHIBITOR, RESIDUES 38-93 Source method: isolated from a genetically manipulated source Source: (gene. exp.) BOS TAURUS (cattle) / Description: SYNTHETIC GENE / Production host: SACCHAROMYCES CEREVISIAE (brewer's yeast) / References: UniProt: P00974 |
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Compound details | FUNCTION: INHIBITS TRYPSIN, KALLIKREIN |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||
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NMR experiment |
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NMR details | Text: THE STRUCTURE WAS DETERMINED USING 2D PROTON NMR SPECTROSCOPY ON UNLABELED 3-58 BPTI |
-Sample preparation
Sample conditions | Ionic strength: 0 / pH: 4.6 / Pressure: 1 atm / Temperature: 303 K |
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-NMR measurement
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: distance geometry / Software ordinal: 1 | ||||||||||||||||
NMR ensemble | Conformer selection criteria: LEAST RESTRAINT VIOLATION & LOWEST ENERGY Conformers calculated total number: 150 / Conformers submitted total number: 20 |