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2RLU
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BU of 2rlu by Molmil
The Three Dimensional Structure of the Moorella thermoacetica Selenocysteine Insertion Sequence RNA Hairpin and its Interaction with the Elongation factor SelB
Descriptor: RNA (5'-R(*GP*GP*UP*UP*GP*CP*GP*GP*GP*UP*CP*UP*CP*GP*CP*AP*AP*CP*C)-3')
Authors:Beribisky, A.V, Tavares, T.J, Amborski, A.N, Motamed, M, Johnson, A.E, Mark, T.L, Johnson, P.E.
Deposit date:2007-08-21
Release date:2008-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The three-dimensional structure of the Moorella thermoacetica selenocysteine insertion sequence RNA hairpin and its interaction with the elongation factor SelB
Rna, 13, 2007
2TPK
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BU of 2tpk by Molmil
AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS
Descriptor: RNA (MRNA PSEUDOKNOT)
Authors:Holland, J.A, Hansen, M.R, Du, Z, Hoffman, D.W.
Deposit date:1998-10-28
Release date:1998-11-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:An examination of coaxial stacking of helical stems in a pseudoknot motif: the gene 32 messenger RNA pseudoknot of bacteriophage T2.
Rna, 5, 1999
485D
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BU of 485d by Molmil
A SULFATE POCKET FORMED BY THREE GOU PAIRS IN THE STRUCTURE OF A NONAMERIC RNA
Descriptor: RNA/DNA(5'-R(*CP*GP*UP*GP*AP*UP*CP*GP)-D(*C)-3'), SULFATE ION
Authors:Masquida, B, Sauter, C, Westhof, E.
Deposit date:1999-08-13
Release date:1999-12-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA.
RNA, 5, 1999
8AMN
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BU of 8amn by Molmil
Crystal structure of AUGUGGCAU duplex with strontium ions
Descriptor: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), STRONTIUM ION
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AMK
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BU of 8amk by Molmil
Crystal structure of AUGUGGCAU duplex crystallized in the presence of calcium ions
Descriptor: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
Authors:Kiliszek, A, Rypniewski, W.
Deposit date:2022-08-03
Release date:2022-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
2F3J
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BU of 2f3j by Molmil
The solution structure of the REF2-I mRNA export factor (residues 1-155).
Descriptor: RNA and export factor binding protein 2
Authors:Golovanov, A.P, Hautbergue, G.M, Wilson, S.A, Lian, L.Y.
Deposit date:2005-11-21
Release date:2006-10-31
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA.
Rna, 12, 2006
4XBF
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BU of 4xbf by Molmil
Structure of LSD1:CoREST in complex with ssRNA
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Lysine-specific histone demethylase 1A, ...
Authors:Luka, Z, Loukachevitch, L.V, Martin, W.J, Wagner, C, Reiter, N.J.
Deposit date:2014-12-16
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:G-quadruplex RNA binding and recognition by the lysine-specific histone demethylase-1 enzyme.
RNA, 22, 2016
1F78
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BU of 1f78 by Molmil
SOLUTION STRUCTURE OF RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-26
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F79
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BU of 1f79 by Molmil
SOLUTION STRUCTURE OF RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT(III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN MUTANT
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-23
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F7H
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BU of 1f7h by Molmil
SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE, NMR, ENSEMBLE OF 11 STRUCTURES
Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-27
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F7I
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BU of 1f7i by Molmil
SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE ,NMR, ENSEMBLE OF 12 STRUCTURES
Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-27
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F6X
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BU of 1f6x by Molmil
SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE
Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-23
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F6Z
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BU of 1f6z by Molmil
SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE
Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN MUTANT
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-24
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F7F
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BU of 1f7f by Molmil
SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE, NMR, ENSEMBLE OF 9 STRUCTURES
Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-27
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
1F7G
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BU of 1f7g by Molmil
SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE, ENSEMBLE OF 17 STRUCTURES
Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN
Authors:Schmitz, M, Tinoco Jr, I.
Deposit date:2000-06-27
Release date:2000-10-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
6HCT
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BU of 6hct by Molmil
Crystal structure of Archeoglobus fulgidus L7Ae bound to its cognate UTR k-turn
Descriptor: 50S ribosomal protein L7Ae, RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*G)-3'), RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3'), ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2018-08-16
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.091 Å)
Cite:The role of RNA structure in translational regulation by L7Ae protein in archaea.
RNA, 25, 2019
6LLB
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BU of 6llb by Molmil
Crystal structure of mpy-RNase J (mutant S247A), an archaeal RNase J from Methanolobus psychrophilus R15, in complex with 6 nt RNA
Descriptor: MPY-RNase J, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), SULFATE ION, ...
Authors:Li, D.F, Hou, Y.J, Guo, L.
Deposit date:2019-12-22
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A newly identified duplex RNA unwinding activity of archaeal RNase J depends on processive exoribonucleolysis coupled steric occlusion by its structural archaeal loops.
Rna Biol., 17, 2020
7JJU
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BU of 7jju by Molmil
Crystal structure of en exoribonuclease-resistant RNA (xrRNA) from Potato leafroll virus (PLRV)
Descriptor: CACODYLATE ION, Guanidinium, IRIDIUM HEXAMMINE ION, ...
Authors:Steckelberg, A.-L, Vicens, Q, Auffinger, P, Costantino, D.C, Nix, J.C, Kieft, J.S.
Deposit date:2020-07-27
Release date:2020-09-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:The crystal structure of a Polerovirus exoribonuclease-resistant RNA shows how diverse sequences are integrated into a conserved fold.
Rna, 26, 2020
7PMM
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BU of 7pmm by Molmil
DEAD-box helicase DbpA in the active conformation bound to a ss/dsRNA junction and ADP/BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DbpA, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Wurm, J.P.
Deposit date:2021-09-02
Release date:2022-09-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for RNA-duplex unwinding by the DEAD-box helicase DbpA.
Rna, 29, 2023
8FTO
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BU of 8fto by Molmil
E. coli 70S ribosome with an improved MS2 tag inserted in H98
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Nissley, A.J, Cate, J.H.D.
Deposit date:2023-01-12
Release date:2023-08-02
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.85 Å)
Cite:Interactions between terminal ribosomal RNA helices stabilize the E. coli large ribosomal subunit.
Rna, 29, 2023
2XC7
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BU of 2xc7 by Molmil
Solution Structure of PHAX-RBD in complex with ssRNA
Descriptor: 5'-(AP*UP*CP*GP)-3', PHOSPHORYLATED ADAPTER RNA EXPORT PROTEIN
Authors:Mourao, A, Mackereth, C.D, Varrot, A, Cusack, S, Sattler, M.
Deposit date:2010-04-18
Release date:2010-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and RNA Recognition by the Snrna and Snorna Transport Factor Phax.
RNA, 16, 2010
1NYB
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BU of 1nyb by Molmil
SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX
Descriptor: BoxB RNA, Probable regulatory protein N
Authors:Cilley, C.D, Williamson, J.R.
Deposit date:2003-02-12
Release date:2003-06-24
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural mimicry in the phage phi21 N peptide-boxB RNA complex
RNA, 9, 2003
2W4S
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BU of 2w4s by Molmil
novel RNA-binding domain in Cryptosporidium parvum at 2.5 angstrom resolution
Descriptor: Ankyrin-repeat protein
Authors:Varrot, A, Mackereth, C, Mourao, A, Sattler, M, Cusack, S.
Deposit date:2008-12-02
Release date:2009-12-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure and RNA Recognition by the Snrna and Snorna Transport Factor Phax.
RNA, 16, 2010
8DCG
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BU of 8dcg by Molmil
Structure of guanylylated RNA ligase RtcB from Pyrococcus horikoshii
Descriptor: CHLORIDE ION, GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Jacewicz, A, Dantuluri, S, Shuman, S.
Deposit date:2022-06-16
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
3IIN
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BU of 3iin by Molmil
Plasticity of the kink turn structural motif
Descriptor: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3'), DNA/RNA (5'-R(*CP*A)-D(P*T)-3'), Group I intron, ...
Authors:Lipchock, S.V, Strobel, S.A, Antonioli, A.H, Cochrane, J.C.
Deposit date:2009-08-02
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (4.18 Å)
Cite:Plasticity of the RNA kink turn structural motif.
Rna, 16, 2010

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